DK951105 |
Clone id |
TST38A01NGRL0010_I04 |
Library |
TST38 |
Length |
686 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_I04. 5' end sequence. |
Accession |
DK951105 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CACCATTTGATCAACGTGCCACTGTTGTAAGTGTATGGCGATGGCGTGTCGATCGAAACC CTATTGGCTTCTTCGACAGACGCTACGAGGTGCATCTGCGACGGCAGCGACCCCTTCGTC TGCCCTTGAGGTCGCGTCGTGGAGTCGTTGCGTCAACGCTATCAGAACGTACGCGTCGGC GCAGGAGGAGCAAAGCGATATTGTGGTCATTGGAGGAGGCCCTGGTGGCTATGTTGCTGC CATTAAAGCTGCTCAATTGGGCATGAAGACGACCTGTGTTGAGAAACGAGGAGCCCTTGG TGGTACCTGTCTTAATGTTGGATGTATCCCATCCAAGGCCCTGCTGCATTCTTCTCACAT GTTTCACGAAGCAAAGCACGCTTTTCCGAATCATGGAGTCAAAGTTGGAAGTGTTGAAAT TGATATTCCTGCTATGATGGCACAAAAAGATAAGGCTGTGACTGGTCTGACAAAAGGAAT TGAAGGCCTTTTTAAGAAGAATAAAGTAACATACGTGAAGGGGAGTGGAAAGATTGCATC TCCAGGTGAGGTTTCAGTAGATCTTTTGGAAGGGGGCACAAAGACACTGAAAGCTAAGAA TATTATCATTGCAACTGGTTCAGAAGTAAAGTCTTTACCTGGTATTACAATCGACGAAAA GAAGATTGTGTCATCAACTGGAGCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M5K3 |
Definition |
sp|Q9M5K3|DLDH1_ARATH Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana |
Align length |
174 |
Score (bit) |
248.0 |
E-value |
3.0e-65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951105|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_I04, 5' (686 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9M5K3|DLDH1_ARATH Dihydrolipoyl dehydrogenase 1, mitochondri... 248 3e-65 sp|P31023|DLDH_PEA Dihydrolipoyl dehydrogenase, mitochondrial OS... 244 2e-64 sp|Q9M5K2|DLDH2_ARATH Dihydrolipoyl dehydrogenase 2, mitochondri... 244 4e-64 sp|Q54EW8|DLDH_DICDI Dihydrolipoyl dehydrogenase OS=Dictyosteliu... 194 5e-49 sp|O00087|DLDH_SCHPO Dihydrolipoyl dehydrogenase, mitochondrial ... 182 1e-45 sp|Q04933|DLDH_TRYBB Dihydrolipoyl dehydrogenase OS=Trypanosoma ... 171 3e-42 sp|O18480|DLDH_MANSE Dihydrolipoyl dehydrogenase OS=Manduca sext... 167 4e-41 sp|P09622|DLDH_HUMAN Dihydrolipoyl dehydrogenase, mitochondrial ... 166 1e-40 sp|P90597|DLDH_TRYCR Dihydrolipoyl dehydrogenase OS=Trypanosoma ... 165 2e-40 sp|Q60HG3|DLDH_MACFA Dihydrolipoyl dehydrogenase, mitochondrial ... 165 2e-40 sp|Q5R4B1|DLDH_PONAB Dihydrolipoyl dehydrogenase, mitochondrial ... 163 7e-40 sp|P49819|DLDH_CANFA Dihydrolipoyl dehydrogenase, mitochondrial ... 163 7e-40 sp|O08749|DLDH_MOUSE Dihydrolipoyl dehydrogenase, mitochondrial ... 162 2e-39 sp|P09623|DLDH_PIG Dihydrolipoyl dehydrogenase, mitochondrial OS... 162 2e-39 sp|Q6P6R2|DLDH_RAT Dihydrolipoyl dehydrogenase, mitochondrial OS... 161 3e-39 sp|P09624|DLDH_YEAST Dihydrolipoyl dehydrogenase, mitochondrial ... 160 8e-39 sp|Q8CIZ7|DLDH_CRIGR Dihydrolipoyl dehydrogenase, mitochondrial ... 159 1e-38 sp|P95596|DLDH_RHOCA Dihydrolipoyl dehydrogenase OS=Rhodobacter ... 153 9e-37 sp|P31046|DLDH3_PSEPU Dihydrolipoyl dehydrogenase 3 OS=Pseudomon... 152 1e-36 sp|P14218|DLDH_PSEFL Dihydrolipoyl dehydrogenase OS=Pseudomonas ... 150 8e-36 sp|Q9HUY1|DLDH3_PSEAE Dihydrolipoyl dehydrogenase 3 OS=Pseudomon... 149 1e-35 sp|Q9I3D1|DLDH2_PSEAE Dihydrolipoamide dehydrogenase OS=Pseudomo... 149 1e-35 sp|P18925|DLDH_AZOVI Dihydrolipoyl dehydrogenase OS=Azotobacter ... 145 2e-34 sp|P31052|DLDH2_PSEPU Dihydrolipoamide dehydrogenase OS=Pseudomo... 142 2e-33 sp|P52992|DLDH_RALEH Dihydrolipoyl dehydrogenase OS=Ralstonia eu... 128 2e-29 sp|P0A0E7|DLDH_STAAW Dihydrolipoyl dehydrogenase OS=Staphylococc... 116 1e-25 sp|P0A0E8|DLDH_STAAU Dihydrolipoyl dehydrogenase OS=Staphylococc... 116 1e-25 sp|Q6GAB8|DLDH_STAAS Dihydrolipoyl dehydrogenase OS=Staphylococc... 116 1e-25 sp|Q6GHY9|DLDH_STAAR Dihydrolipoyl dehydrogenase OS=Staphylococc... 116 1e-25 sp|P99084|DLDH_STAAN Dihydrolipoyl dehydrogenase OS=Staphylococc... 116 1e-25
>sp|Q9M5K3|DLDH1_ARATH Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2 Length = 507
Score = 248 bits (632), Expect = 3e-65 Identities = 120/174 (68%), Positives = 142/174 (81%) Frame = +2
Query: 164 RTYASAQEEQSDXXXXXXXXXXXXXXXKAAQLGMKTTCVEKRGALGGTCLNVGCIPSKAL 343 R +AS+ +++D KA+QLG+KTTC+EKRGALGGTCLNVGCIPSKAL Sbjct: 34 RGFASSGSDENDVVIIGGGPGGYVAAIKASQLGLKTTCIEKRGALGGTCLNVGCIPSKAL 93
Query: 344 LHSSHMFHEAKHAFPNHGVKVGSVEIDIPAMMAQKDKAVTGLTKGIEGLFKKNKVTYVKG 523 LHSSHM+HEAKH+F NHG+KV SVE+D+PAM+AQKD AV LT+GIEGLFKKNKVTYVKG Sbjct: 94 LHSSHMYHEAKHSFANHGIKVSSVEVDLPAMLAQKDNAVKNLTRGIEGLFKKNKVTYVKG 153
Query: 524 SGKIASPGEVSVDLLEGGTKTLKAKNIIIATGSEVKSLPGITIDEKKIVSSTGA 685 GK SP EVSV+ ++GG +K K+II+ATGS+VKSLPGITIDEKKIVSSTGA Sbjct: 154 YGKFISPNEVSVETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGA 207
>sp|P31023|DLDH_PEA Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisum sativum GN=LPD PE=1 SV=2 Length = 501
Score = 244 bits (624), Expect = 2e-64 Identities = 123/174 (70%), Positives = 139/174 (79%) Frame = +2
Query: 164 RTYASAQEEQSDXXXXXXXXXXXXXXXKAAQLGMKTTCVEKRGALGGTCLNVGCIPSKAL 343 R +AS +E +D KAAQLG KTTC+EKRGALGGTCLNVGCIPSKAL Sbjct: 29 RAFASGSDE-NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKAL 87
Query: 344 LHSSHMFHEAKHAFPNHGVKVGSVEIDIPAMMAQKDKAVTGLTKGIEGLFKKNKVTYVKG 523 LHSSHM+HEAKH+F NHGVKV +VEID+ AMM QKDKAV+ LT+GIEGLFKKNKVTYVKG Sbjct: 88 LHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKG 147
Query: 524 SGKIASPGEVSVDLLEGGTKTLKAKNIIIATGSEVKSLPGITIDEKKIVSSTGA 685 GK SP E+SVD +EG +K K+IIIATGS+VKSLPG+TIDEKKIVSSTGA Sbjct: 148 YGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGA 201
>sp|Q9M5K2|DLDH2_ARATH Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=LPD2 PE=1 SV=1 Length = 507
Score = 244 bits (622), Expect = 4e-64 Identities = 120/174 (68%), Positives = 138/174 (79%) Frame = +2
Query: 164 RTYASAQEEQSDXXXXXXXXXXXXXXXKAAQLGMKTTCVEKRGALGGTCLNVGCIPSKAL 343 R +AS+ + +D KAAQLG+KTTC+EKRGALGGTCLNVGCIPSKAL Sbjct: 34 RGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKAL 93
Query: 344 LHSSHMFHEAKHAFPNHGVKVGSVEIDIPAMMAQKDKAVTGLTKGIEGLFKKNKVTYVKG 523 LHSSHM+HEAKH F NHGVKV SVE+D+PAM+AQKD AV LT+G+EGLFKKNKV YVKG Sbjct: 94 LHSSHMYHEAKHVFANHGVKVSSVEVDLPAMLAQKDTAVKNLTRGVEGLFKKNKVNYVKG 153
Query: 524 SGKIASPGEVSVDLLEGGTKTLKAKNIIIATGSEVKSLPGITIDEKKIVSSTGA 685 GK SP EVSVD ++G +K K+II+ATGS+VKSLPGITIDEKKIVSSTGA Sbjct: 154 YGKFLSPSEVSVDTIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGA 207
>sp|Q54EW8|DLDH_DICDI Dihydrolipoyl dehydrogenase OS=Dictyostelium discoideum GN=lpd PE=3 SV=1 Length = 488
Score = 194 bits (492), Expect = 5e-49 Identities = 101/180 (56%), Positives = 121/180 (67%), Gaps = 2/180 (1%) Frame = +2
Query: 152 VNAIRTYASA--QEEQSDXXXXXXXXXXXXXXXKAAQLGMKTTCVEKRGALGGTCLNVGC 325 ++ +RT+ EQ D KA QLGMK T VEKRG LGGTCLNVGC Sbjct: 7 ISNLRTFGQRFFSTEQQDVVVIGGGPGGYVAGIKAGQLGMKVTVVEKRGKLGGTCLNVGC 66
Query: 326 IPSKALLHSSHMFHEAKHAFPNHGVKVGSVEIDIPAMMAQKDKAVTGLTKGIEGLFKKNK 505 IPSKALL++SH++ EA +GVK VE+D+ AMM KDK+V+GLT GIEGLFKKNK Sbjct: 67 IPSKALLNASHLYEEATTKMSKYGVKCSGVELDLGAMMQYKDKSVSGLTSGIEGLFKKNK 126
Query: 506 VTYVKGSGKIASPGEVSVDLLEGGTKTLKAKNIIIATGSEVKSLPGITIDEKKIVSSTGA 685 V Y KG GKI P V V L +G KT++ KNI+IATGSEV SLP + IDE+ I+SSTGA Sbjct: 127 VKYDKGFGKITGPNTVEVTLNDGSVKTIETKNIVIATGSEVTSLPNVNIDEESIISSTGA 186
>sp|O00087|DLDH_SCHPO Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=dld1 PE=2 SV=2 Length = 511
Score = 182 bits (462), Expect = 1e-45 Identities = 91/148 (61%), Positives = 109/148 (73%), Gaps = 1/148 (0%) Frame = +2
Query: 245 KAAQLGMKTTCVEKRGALGGTCLNVGCIPSKALLHSSHMFHEAKHAFPNHGVKVGSVEID 424 + AQLG+KT CVEKRG LGGTCLNVGCIPSKALL++SH++H KH G+ V V ++ Sbjct: 63 RGAQLGLKTICVEKRGTLGGTCLNVGCIPSKALLNNSHIYHTVKHDTKRRGIDVSGVSVN 122
Query: 425 IPAMMAQKDKAVTGLTKGIEGLFKKNKVTYVKGSGKIASPGEVSVDLLEGGT-KTLKAKN 601 + MM KD +V LT GIE LFKKNKV Y KG+G P +SV ++G +T+KAKN Sbjct: 123 LSQMMKAKDDSVKSLTSGIEYLFKKNKVEYAKGTGSFIDPQTLSVKGIDGAADQTIKAKN 182
Query: 602 IIIATGSEVKSLPGITIDEKKIVSSTGA 685 IIATGSEVK PG+TIDEKKIVSSTGA Sbjct: 183 FIIATGSEVKPFPGVTIDEKKIVSSTGA 210
>sp|Q04933|DLDH_TRYBB Dihydrolipoyl dehydrogenase OS=Trypanosoma brucei brucei PE=3 SV=1 Length = 479
Score = 171 bits (434), Expect = 3e-42 Identities = 85/148 (57%), Positives = 110/148 (74%), Gaps = 1/148 (0%) Frame = +2
Query: 245 KAAQLGMKTTCVEKRGALGGTCLNVGCIPSKALLHSSHMFHEAKHAFPNHGVKVGS-VEI 421 KAAQLG+KT CVEKRGALGGTCLNVGCIPSKALLH++HM+H+A F +G+ G+ V + Sbjct: 29 KAAQLGLKTACVEKRGALGGTCLNVGCIPSKALLHATHMYHDAHANFERYGLMGGAGVTM 88
Query: 422 DIPAMMAQKDKAVTGLTKGIEGLFKKNKVTYVKGSGKIASPGEVSVDLLEGGTKTLKAKN 601 D+ M QK+K+V GLT G+E L KKNKVTY KG +P ++V ++G + ++AKN Sbjct: 89 DVAKMQQQKEKSVNGLTSGVEYLLKKNKVTYYKGEAGFVTPNTLNVKGIDGKDEAIEAKN 148
Query: 602 IIIATGSEVKSLPGITIDEKKIVSSTGA 685 IIATGSE +LP + DEK ++SSTGA Sbjct: 149 TIIATGSEPTALPFLPFDEKVVLSSTGA 176
>sp|O18480|DLDH_MANSE Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 SV=1 Length = 497
Score = 167 bits (424), Expect = 4e-41 Identities = 85/147 (57%), Positives = 107/147 (72%) Frame = +2
Query: 245 KAAQLGMKTTCVEKRGALGGTCLNVGCIPSKALLHSSHMFHEAKHAFPNHGVKVGSVEID 424 KAAQLGMK VEK +LGGTCLNVGCIPSKALLH++H++H AKH F + G++ G V+ + Sbjct: 48 KAAQLGMKVVSVEKEPSLGGTCLNVGCIPSKALLHNTHLYHMAKHDFKHRGIETGEVKFN 107
Query: 425 IPAMMAQKDKAVTGLTKGIEGLFKKNKVTYVKGSGKIASPGEVSVDLLEGGTKTLKAKNI 604 AMM K AV LT GI LF+KNKV V+G+G I +P +V V E G +T+ KNI Sbjct: 108 FKAMMDYKVNAVKALTGGIAMLFQKNKVKLVRGAGTIVAPNKVEVK-GEKGVETVNTKNI 166
Query: 605 IIATGSEVKSLPGITIDEKKIVSSTGA 685 +IATGSEV PG+T DEK+I++STGA Sbjct: 167 LIATGSEVTPFPGVTFDEKQIITSTGA 193
>sp|P09622|DLDH_HUMAN Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=1 Length = 509
Score = 166 bits (419), Expect = 1e-40 Identities = 90/176 (51%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +2
Query: 161 IRTYASAQEEQSDXXXXXXXXXXXXXXXKAAQLGMKTTCVEKRGALGGTCLNVGCIPSKA 340 +RTYA Q +D KAAQLG KT C+EK LGGTCLNVGCIPSKA Sbjct: 32 LRTYAD-QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKA 90
Query: 341 LLHSSHMFHEAKHA-FPNHGVKVGSVEIDIPAMMAQKDKAVTGLTKGIEGLFKKNKVTYV 517 LL++SH +H A F + G+++ V +++ MM QK AV LT GI LFK+NKV +V Sbjct: 91 LLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHV 150
Query: 518 KGSGKIASPGEVSVDLLEGGTKTLKAKNIIIATGSEVKSLPGITIDEKKIVSSTGA 685 G GKI +V+ +GGT+ + KNI+IATGSEV PGITIDE IVSSTGA Sbjct: 151 NGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGA 206
>sp|P90597|DLDH_TRYCR Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi GN=LPD PE=1 SV=1 Length = 477
Score = 165 bits (418), Expect = 2e-40 Identities = 85/148 (57%), Positives = 105/148 (70%), Gaps = 1/148 (0%) Frame = +2
Query: 245 KAAQLGMKTTCVEKRGALGGTCLNVGCIPSKALLHSSHMFHEAKHAFPNHGVKVG-SVEI 421 KAAQLGMKT CVEKRGALGGTCLNVGCIPSKALLH++H++H+A F +G+ G V + Sbjct: 29 KAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHVYHDAHANFARYGLMGGEGVTM 88
Query: 422 DIPAMMAQKDKAVTGLTKGIEGLFKKNKVTYVKGSGKIASPGEVSVDLLEGGTKTLKAKN 601 D M QK++AV GLT G+E LFKKNKVTY KG G + + V+ L+G + + K Sbjct: 89 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMFETKK 148
Query: 602 IIIATGSEVKSLPGITIDEKKIVSSTGA 685 IIATGSE LP + DEK ++SSTGA Sbjct: 149 TIIATGSEPTELPFLPFDEKVVLSSTGA 176
>sp|Q60HG3|DLDH_MACFA Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis GN=DLD PE=2 SV=1 Length = 509
Score = 165 bits (417), Expect = 2e-40 Identities = 91/176 (51%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +2
Query: 161 IRTYASAQEEQSDXXXXXXXXXXXXXXXKAAQLGMKTTCVEKRGALGGTCLNVGCIPSKA 340 +RTYA Q +D KAAQLG KT CVEK LGGTCLNVGCIPSKA Sbjct: 32 LRTYAD-QLIDADVTVIGSGPGGYVAAIKAAQLGFKTVCVEKNETLGGTCLNVGCIPSKA 90
Query: 341 LLHSSHMFHEAKHA-FPNHGVKVGSVEIDIPAMMAQKDKAVTGLTKGIEGLFKKNKVTYV 517 LL++SH +H A F + G+++ V +++ MM QK AV LT GI LFK+NKV +V Sbjct: 91 LLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVIHV 150
Query: 518 KGSGKIASPGEVSVDLLEGGTKTLKAKNIIIATGSEVKSLPGITIDEKKIVSSTGA 685 G GKI +V+ ++GGT+ + KNI+IATGSEV PGITIDE IVSSTGA Sbjct: 151 NGYGKITGKNQVTATKVDGGTQVVDTKNILIATGSEVTPFPGITIDEDTIVSSTGA 206
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQQ4 |
Definition |
tr|B8LQQ4|B8LQQ4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
180 |
Score (bit) |
263.0 |
E-value |
1.0e-68 |
Report |
|