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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951108
Clone id TST38A01NGRL0010_I07
Library
Length 681
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_I07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
ATGTAATGGAGCGTTCGTAGCGTGTCTCGCACAGAAAATCAGCCTCTTCATCCTCTTCTG
TGGACTGGGCCGAATGGGTGCCAGAGTGCCTGCAACCAGCCATAGCCATAGCCAGCAAGC
TTCCATACCACCACGACCACGAGGATGATGAAGACGAGGACGATGAGGATGATGGCCATT
CTGTAGACAATGAGCAGGATCCTCATCAGAACAGTTATGAGGAGGAGGAAGACGAAGATG
GATATCACCGTTTACAAGAACACACACAGTTCCACCGTGTCCACCATCACCTTCACAGGC
AAGGTGCAGGGGCTGCGTTAAGGTCAAGAGGACGCCAGCAGCATCAGCATCATCACCAGA
ATCATGGAGGGGATGGAAAACTGTGCGTCTCTTGCAAGGAGCTCTACTGTCCTCTTCGTG
GGGGTGATACCTGCCATGAGTGCTATGAGGAAGCTTCTGAAGCAGAGGCCGCCCTCAAGA
AAGAGATTGAAGAGCTCAATGCCCGCATTGTCTTCCTCCGCACTTGGGCACCTGAAGCCA
TGTCTGAGCAATTCTCAGACCTTGTTCTTGAGAGCTCTGATGGCTCCNAAATTAGGGCTC
ATCGAGCTATTTTGGTATGTCTCTCTTGTTTTAATCAGAATTTATTTGGCTGCAACCCTT
CATTGCTTTTGTTCTTCTGTC
■■Homology search results ■■ -
sp_hit_id Q23985
Definition sp|Q23985|DTX_DROME Protein deltex OS=Drosophila melanogaster
Align length 47
Score (bit) 33.5
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951108|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_I07, 5'
         (681 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q23985|DTX_DROME Protein deltex OS=Drosophila melanogaster GN...    33   1.1  
sp|Q9XTQ7|KE4L_CAEEL Putative Ke4-like protein tag-148 OS=Caenor...    32   2.4  
sp|A5DXA0|NST1_LODEL Stress response protein NST1 OS=Lodderomyce...    32   3.1  
sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinac...    32   3.1  
sp|Q1ZXC2|PABPA_DICDI Polyadenylate-binding protein 1-A OS=Dicty...    31   5.3  
sp|P08016|EGGS_SCHMA Putative eggshell protein (Fragment) OS=Sch...    31   5.3  
sp|Q01306|CCG8_NEUCR Clock-controlled protein 8 OS=Neurospora cr...    31   5.3  
sp|Q24573|DRI_DROME Protein dead ringer OS=Drosophila melanogast...    31   6.9  
sp|Q8NA31|CCD79_HUMAN Coiled-coil domain-containing protein 79 O...    31   6.9  
sp|Q05738|SRY_MOUSE Sex-determining region Y protein OS=Mus musc...    30   9.1  
sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium l...    30   9.1  
sp|Q6FQG3|BSP1_CANGA Protein BSP1 OS=Candida glabrata GN=BSP1 PE...    30   9.1  

>sp|Q23985|DTX_DROME Protein deltex OS=Drosophila melanogaster GN=dx
           PE=1 SV=2
          Length = 738

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +3

Query: 177 HSVDNEQDPHQNSYEEEEDEDGYHRLQEH---TQFHRVHHHLHRQGA 308
           H V  +Q  HQ+  ++++     H+ Q+H    Q    HH +H Q A
Sbjct: 259 HQVQQQQHQHQHQQQQQQQHHHQHQQQQHQQQQQHQMQHHQIHHQTA 305


>sp|Q9XTQ7|KE4L_CAEEL Putative Ke4-like protein tag-148
           OS=Caenorhabditis elegans GN=tag-148 PE=1 SV=2
          Length = 462

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 174 GHSVDN--EQDPHQNSYEEEEDEDGYHRLQEHTQFHRVHHHLH 296
           GH+ D+    D H +S++EEED    H    H   H  H H H
Sbjct: 87  GHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHEDHGHSH 129


>sp|A5DXA0|NST1_LODEL Stress response protein NST1 OS=Lodderomyces
           elongisporus GN=NST1 PE=3 SV=1
          Length = 1637

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +3

Query: 177 HSVDNEQDPHQNSYEEEEDEDGYHRL--QEHTQF---HRVHHHLH 296
           HS   ++D H + +E E + +  H +  ++H  +   H  HHHLH
Sbjct: 707 HSHWLDEDDHDHEHEHEHEHEHEHEIDDEDHEHYCCHHHQHHHLH 751


>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia
           oleracea PE=1 SV=2
          Length = 181

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +1

Query: 373 MENCASLARSSTVLFVGVIPAMSAMRKLLKQRPPSRKRLKSSMPALSSS 519
           +ENC  L+ S++V  V V   +  ++   K   P+ + LK S PALSSS
Sbjct: 3   IENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSS 51


>sp|Q1ZXC2|PABPA_DICDI Polyadenylate-binding protein 1-A
           OS=Dictyostelium discoideum GN=pabp1A PE=3 SV=1
          Length = 814

 Score = 31.2 bits (69), Expect = 5.3
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
 Frame = +3

Query: 177 HSVDNEQDP--------HQNSYEEEEDEDGYHRLQ----EHTQFHRVHHHLHRQGAGAAL 320
           HS+  +Q P        HQ  +   + +  +H+ Q    +H Q H+ H H H    GA  
Sbjct: 102 HSIHQQQHPGYVPSHHHHQQQHHHHQHQHQHHQHQHHQHQHHQHHQHHQHHHTSPMGAGA 161

Query: 321 RSRG 332
            + G
Sbjct: 162 GAAG 165


>sp|P08016|EGGS_SCHMA Putative eggshell protein (Fragment)
           OS=Schistosoma mansoni PE=2 SV=1
          Length = 149

 Score = 31.2 bits (69), Expect = 5.3
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +3

Query: 177 HSVDNEQDPHQNSYEEEEDEDGYHRLQEHTQFHRVHH-HLHRQGAG 311
           +S   + D H +   +  D+   HR   H   H  HH H H+ G G
Sbjct: 103 YSYRKDHDKHDHDEHDHHDDHHDHRHHHHEHDHHHHHEHDHKNGKG 148


>sp|Q01306|CCG8_NEUCR Clock-controlled protein 8 OS=Neurospora
           crassa GN=ccg-8 PE=2 SV=3
          Length = 661

 Score = 31.2 bits (69), Expect = 5.3
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 177 HSVDNEQDPHQN--SYEEEEDEDGYHRLQEHTQFHRVHHHLHRQ 302
           HS  ++Q  HQ    Y++      ++   +H Q H+ HHH  +Q
Sbjct: 11  HSPSSQQHEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHHHQQQQ 54


>sp|Q24573|DRI_DROME Protein dead ringer OS=Drosophila melanogaster
           GN=retn PE=1 SV=2
          Length = 911

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 201 PHQNSYEEEEDEDGYHRLQEHTQFHRVHHHLHRQ 302
           PHQ  + +++ +  +H  Q+  Q  +  HHL +Q
Sbjct: 511 PHQQQHSQQQQQQQHHHQQQQQQQSQQQHHLQQQ 544


>sp|Q8NA31|CCD79_HUMAN Coiled-coil domain-containing protein 79
           OS=Homo sapiens GN=CCDC79 PE=2 SV=2
          Length = 680

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
 Frame = +3

Query: 192 EQDPHQNSYEEEEDEDGYHRLQEHTQFHRVHHHLHRQGAGAALRS--RGRXXXXXXXXNH 365
           E++ ++   + E  +D    +    Q    H H  R G G+      +          +H
Sbjct: 419 EREGNEEEIQRENYQDNISSMNISIQNTWKHLHADRIGRGSKAEDEDKSHSRQLQSYKSH 478

Query: 366 GGDGKLCVSCKELYCPLRGGDTCHECY 446
           G   K C +  ++  PL+  +  H CY
Sbjct: 479 GVMSKACTNDDQMKTPLKSANPVHACY 505


>sp|Q05738|SRY_MOUSE Sex-determining region Y protein OS=Mus
           musculus GN=Sry PE=1 SV=2
          Length = 395

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 177 HSVDNEQDPHQNSYEEEEDEDGYHRLQEHTQFHRVHHHLHRQ 302
           H    +   HQ   ++++ +  +   Q+  QFH  HHH  +Q
Sbjct: 218 HQQQQQFHDHQQQQQQQQQQQFHDHHQQKQQFHDHHHHQQQQ 259
tr_hit_id A9NPG7
Definition tr|A9NPG7|A9NPG7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 81
Score (bit) 65.9
E-value 2.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951108|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_I07, 5'
         (681 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NPG7|A9NPG7_PICSI Putative uncharacterized protein OS=Picea...    66   2e-09
tr|A9TJU2|A9TJU2_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.012
tr|Q6DBN1|Q6DBN1_ARATH At4g08455 OS=Arabidopsis thaliana GN=At4g...    40   0.14 
tr|O81475|O81475_ARATH T15F16.14 protein OS=Arabidopsis thaliana...    40   0.18 
tr|A9TVR9|A9TVR9_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.18 
tr|B4L6I2|B4L6I2_DROMO GI16178 OS=Drosophila mojavensis GN=GI161...    39   0.23 
tr|B7FUE8|B7FUE8_PHATR Predicted protein OS=Phaeodactylum tricor...    39   0.40 
tr|B4N1Z9|B4N1Z9_DROWI GK16404 OS=Drosophila willistoni GN=GK164...    36   2.0  
tr|B4I099|B4I099_DROSE GM12494 OS=Drosophila sechellia GN=GM1249...    36   2.0  
tr|B4M857|B4M857_DROVI GJ16668 OS=Drosophila virilis GN=GJ16668 ...    36   2.6  
tr|Q6CB83|Q6CB83_YARLI YALI0C21186p OS=Yarrowia lipolytica GN=YA...    36   2.6  
tr|B7QAC2|B7QAC2_IXOSC Sarcoplasmic reticulum histidine-rich cal...    35   3.4  
tr|Q9UUP3|Q9UUP3_PNECA Histidine and aspartic acid rich protein ...    35   3.4  
tr|Q01848|Q01848_PNECA Surface antigen (Fragment) OS=Pneumocysti...    35   3.4  
tr|Q24754|Q24754_DROVI Mastermind OS=Drosophila virilis GN=mam P...    35   4.4  
tr|B4LNR9|B4LNR9_DROVI Mastermind OS=Drosophila virilis GN=Dvir\...    35   4.4  
tr|A7TPP9|A7TPP9_VANPO Putative uncharacterized protein (Fragmen...    35   4.4  
tr|A8MRN4|A8MRN4_ARATH Uncharacterized protein At3g63095.1 OS=Ar...    35   5.8  
tr|B4PLD9|B4PLD9_DROYA GE26052 OS=Drosophila yakuba GN=GE26052 P...    35   5.8  
tr|B4M269|B4M269_DROVI GJ18712 OS=Drosophila virilis GN=GJ18712 ...    35   5.8  
tr|B4GWT5|B4GWT5_DROPE GL16372 OS=Drosophila persimilis GN=GL163...    35   5.8  
tr|A4R3L4|A4R3L4_MAGGR Predicted protein OS=Magnaporthe grisea G...    35   5.8  
tr|A5Z4G4|A5Z4G4_9FIRM Putative uncharacterized protein OS=Eubac...    34   7.5  
tr|B4MW05|B4MW05_DROWI GK14964 OS=Drosophila willistoni GN=GK149...    34   7.5  
tr|B4HAV8|B4HAV8_DROPE GL21030 OS=Drosophila persimilis GN=GL210...    34   7.5  
tr|B0X810|B0X810_CULQU FAM46C OS=Culex quinquefasciatus GN=CpipJ...    34   7.5  
tr|A4APS0|A4APS0_9FLAO Glycerol kinase OS=Flavobacteriales bacte...    34   9.8  
tr|B4MZE2|B4MZE2_DROWI GK18314 OS=Drosophila willistoni GN=GK183...    34   9.8  
tr|B3LZV4|B3LZV4_DROAN GF16692 OS=Drosophila ananassae GN=GF1669...    34   9.8  
tr|A5N5W7|A5N5W7_CLOK5 EmrB-related transporter protein OS=Clost...    34   9.9  

>tr|A9NPG7|A9NPG7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 249

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 33/81 (40%), Positives = 44/81 (54%)
 Frame = +3

Query: 384 CVSCKELYCPLRGGDTCHECYXXXXXXXXXXXXXXXXXXXRIVFLRTWAPEAMSEQFSDL 563
           C+SCK+ Y     G TC ECY                   RI FL+ WA EAM + ++D+
Sbjct: 20  CISCKDEYTTSSAG-TCRECYEEASETEEELKKEIEELKSRIAFLKMWASEAMLDDYTDV 78

Query: 564 VLESSDGSXIRAHRAILVCLS 626
            L+ SDGS I+AHRA+L+  S
Sbjct: 79  SLQLSDGSKIKAHRAVLISKS 99


>tr|A9TJU2|A9TJU2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_93690 PE=4 SV=1
          Length = 713

 Score = 43.5 bits (101), Expect = 0.012
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = +3

Query: 504 RIVFLRTWAPEAMSEQFSDLVLESSDGSXIRAHRAILVCLSCFNQNL 644
           +I+FL TW P  MS  ++D++L+S  G  + AHRA+LV +  F+  L
Sbjct: 417 QIIFLSTWDPVVMSPGYTDIILQSG-GHIVNAHRAVLVMIPTFSSIL 462


>tr|Q6DBN1|Q6DBN1_ARATH At4g08455 OS=Arabidopsis thaliana
           GN=At4g08455 PE=2 SV=1
          Length = 243

 Score = 40.0 bits (92), Expect = 0.14
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
 Frame = +3

Query: 384 CVSCKELYCPLRGGDTCHECYXXXXXXXXXXXXXXXXXXXRIVFLR-----TWAPEAMSE 548
           C+SC+E Y P R   TC ECY                   ++ FLR          + S 
Sbjct: 3   CISCREEYLP-RNAGTCKECYVEAGETEEELKREIDDLKAKVAFLRLSSSLDHGTSSTSR 61

Query: 549 QFSDLVLESSDGS----XIRAHRAILVCLS 626
            F+D+VL +S+ +     I AH+++LV  S
Sbjct: 62  SFTDVVLIASEDNAGSPPIPAHKSVLVSRS 91


>tr|O81475|O81475_ARATH T15F16.14 protein OS=Arabidopsis thaliana
           GN=T15F16.14 PE=4 SV=1
          Length = 331

 Score = 39.7 bits (91), Expect = 0.18
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
 Frame = +3

Query: 384 CVSCKELYCPLRGGDTCHECYXXXXXXXXXXXXXXXXXXXRIVFLR-----TWAPEAMSE 548
           C+SC+E Y P R   TC ECY                   ++ FLR          + S 
Sbjct: 68  CISCREEYLP-RNAGTCKECYVEAGETEEELKREIDDLKAKVAFLRLSSSLDHGTSSTSR 126

Query: 549 QFSDLVLESSDGS----XIRAHRAILV 617
            F+D+VL +S+ +     I AH+++LV
Sbjct: 127 SFTDVVLIASEDNAGSPPIPAHKSVLV 153


>tr|A9TVR9|A9TVR9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_97923 PE=4 SV=1
          Length = 217

 Score = 39.7 bits (91), Expect = 0.18
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = +3

Query: 513 FLRTWAPEAMSEQFSDLVLESSDGSXIRAHRAILVCLSCFNQNLF 647
           F+ TW PE M    +D++LE++DG  + AH++ L+  S   + LF
Sbjct: 30  FITTWDPETMLPPHTDVILEANDGRLVHAHKSTLMGKSTAFKTLF 74


>tr|B4L6I2|B4L6I2_DROMO GI16178 OS=Drosophila mojavensis GN=GI16178
           PE=4 SV=1
          Length = 750

 Score = 39.3 bits (90), Expect = 0.23
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = +3

Query: 174 GHSVDNEQD---PHQNSYEEEEDEDGYHRLQEHTQFHRVHHHLHRQGAGAALRSRG 332
           GH  ++E D    H + +E E +     R+  H   H  HHH H QG      SRG
Sbjct: 223 GHHHEHEHDHDHEHDHDHEHELEHHDDERINVHHHHHHNHHHRHHQGVSIGSGSRG 278


>tr|B7FUE8|B7FUE8_PHATR Predicted protein OS=Phaeodactylum
           tricornutum CCAP 1055/1 GN=PHATRDRAFT_44527 PE=4 SV=1
          Length = 1533

 Score = 38.5 bits (88), Expect = 0.40
 Identities = 25/84 (29%), Positives = 38/84 (45%)
 Frame = -1

Query: 450 PHSTHGRYHPHEEDSRAPCKRRTVFHPLHDSGDDADAAGVLLTLTQPLHLACEGDGGHGG 271
           PH TH R    + D+  P   R+    L     +A AA +  T T       + D  H  
Sbjct: 130 PHGTHNRVEDDDSDAYRPLSVRSESDAL-AMRSEAAAAFMESTATVSARTINDLDDEHED 188

Query: 270 TVCVLVNGDIHLRLPPPHNCSDED 199
              +LV+G++ L  PPP N +++D
Sbjct: 189 AEFILVDGELVLMPPPPPNAAEQD 212


>tr|B4N1Z9|B4N1Z9_DROWI GK16404 OS=Drosophila willistoni GN=GK16404
           PE=4 SV=1
          Length = 1723

 Score = 36.2 bits (82), Expect = 2.0
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = +3

Query: 192 EQDPHQNSYEEEEDEDGYHRLQEHTQFHRVHHHLHRQGAGAALRSRGRXXXXXXXXNHGG 371
           +QDP Q  ++E++ +    +L +  Q  R HH+ ++ GAGA   + G         +  G
Sbjct: 199 QQDPQQEQHQEQQQQQPQQQLIQEDQ--RYHHYNNKAGAGAGAGAGGGSKQQPLLRSSNG 256

Query: 372 DGKLCVSCK-ELYCPLRGGDTCHECY 446
             +   S    +      G +CH CY
Sbjct: 257 HFRRTQSLSTAIDKTTSSGRSCHICY 282


>tr|B4I099|B4I099_DROSE GM12494 OS=Drosophila sechellia GN=GM12494
           PE=4 SV=1
          Length = 734

 Score = 36.2 bits (82), Expect = 2.0
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 177 HSVDNEQDPHQNSYEEEEDEDGYHRLQEHTQFHRV-HHHLHRQGA 308
           H V  +Q  HQ+ ++++  +  +H   +  Q H++ HH +H Q A
Sbjct: 259 HQVQQQQQQHQHQHQQQHQQQQHHHQHQQQQQHQMQHHQIHHQTA 303


>tr|B4M857|B4M857_DROVI GJ16668 OS=Drosophila virilis GN=GJ16668
           PE=4 SV=1
          Length = 927

 Score = 35.8 bits (81), Expect = 2.6
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 174 GHSVDNEQDPHQNSYEEEEDEDGYHRLQEHTQFHRVHHHLHRQGAGAALRS 326
           GH  D+E   H++ +E E +++   R+  H   H  HHH H+ G+  + RS
Sbjct: 406 GHHHDHE---HEHDHEHEHEDE---RMTVHHHHHHHHHHHHQAGSSGSSRS 450