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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951123
Clone id TST38A01NGRL0010_I22
Library
Length 641
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_I22. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGCCGTTAATGGTGGTCTCAACCAGTGTGTGCGCATGTAGCGCGGGTGGCTGGACGGCCC
GGCACCGTTACCAGGATTTCCAGAAGGCACTTTCCTTCTCGTCATCCACTTGGCCTGGAA
CGTCTCTTAAAGATAATGGATCCAAAAGAAGTAATTGCTCAATCCCCGTGGCAGCAATGC
CACTACTGTCACTTGCAGCAGAATTTACTCAGCAGAAGGTTGAGACTATTTATAATGACT
GGATGATAGACGAAATGACTCTGAAAAACATATATCTATGCTTCAGCCTGTTTTTTGTGT
GGGGCTGCTGTGTATTTGGGTCCATGAAGGACCCATTTTACGACAGTGATCTCTATAGAG
GTGTTTTTTTTTACCCCCCCCGCCATTGGCTCTATCAAAAAGAGGAAGATGAAGAGGTGA
AGGCCAGGGAGGAGCTGTGGAGGGAGGAGCTTGCACGTGAAATCGAAGAGCGCGTGGGAG
AGCTGCGAGAATCAAAGGAAGCCAAGGAGCTGGTCTGAGCTGTGAAAACCCAAAGAGTGT
TCGTGTAATGTAAATGCTACCTTTCCATCACGTGGTGTTGTGGTCTGACTTATGCTCTGT
ACTCATAGCTTAGGTTACAAGTTTACAACTGCTTTCCCTTT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951123|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_I22, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A7PDK3
Definition tr|A7PDK3|A7PDK3_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera
Align length 110
Score (bit) 69.7
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951123|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_I22, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PDK3|A7PDK3_VITVI Chromosome chr17 scaffold_12, whole genom...    70   1e-10
tr|A5BR34|A5BR34_VITVI Putative uncharacterized protein OS=Vitis...    70   1e-10
tr|B6TFG6|B6TFG6_MAIZE Putative uncharacterized protein OS=Zea m...    67   7e-10
tr|Q6Z2U3|Q6Z2U3_ORYSJ Os02g0744000 protein OS=Oryza sativa subs...    67   9e-10
tr|B8AIF7|B8AIF7_ORYSI Putative uncharacterized protein OS=Oryza...    67   9e-10
tr|A9PFW0|A9PFW0_POPTR Putative uncharacterized protein OS=Popul...    66   2e-09
tr|B7FML9|B7FML9_MEDTR Putative uncharacterized protein OS=Medic...    65   5e-09
tr|B6U6B2|B6U6B2_MAIZE Putative uncharacterized protein OS=Zea m...    64   6e-09
tr|Q8RXS1|Q8RXS1_ARATH Putative uncharacterized protein At1g1873...    62   2e-08
tr|Q9M9U4|Q9M9U4_ARATH F6A14.16 protein OS=Arabidopsis thaliana ...    62   3e-08
tr|B3H6Z4|B3H6Z4_ARATH Uncharacterized protein At1g18730.4 OS=Ar...    60   9e-08
tr|A8MRZ5|A8MRZ5_ARATH Uncharacterized protein At1g18730.2 OS=Ar...    60   9e-08
tr|A9SW72|A9SW72_PHYPA Predicted protein (Fragment) OS=Physcomit...    58   4e-07
tr|B6FXU0|B6FXU0_9CLOT Putative uncharacterized protein OS=Clost...    34   6.6  
tr|B0UYK5|B0UYK5_DANRE Novel protein similar to vertebrate ATP-b...    34   8.7  
tr|A3ABA5|A3ABA5_ORYSJ Putative uncharacterized protein OS=Oryza...    34   8.7  

>tr|A7PDK3|A7PDK3_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016315001
           PE=4 SV=1
          Length = 181

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
 Frame = +3

Query: 180 PLLSLAAEFTQQKVETIYND--WMIDEMTLKNIYLCFSLFFVWGCCVFGSMKDPFYDSDL 353
           PL+++  E  + + + I +   W +++ T+KN+Y  + +F  WGCC FGS KDP+YDS+ 
Sbjct: 69  PLMAVLVEHVEGQRDLITHKSIWHLNDETIKNVYTFYIMFTCWGCCFFGSTKDPYYDSEQ 128

Query: 354 YRGVFFYPPRHWLYQKXXXXXXXXXXXXXXXXXXXXXXXXVGELRESKEA 503
           YR        HW+Y+K                        VG LRE +EA
Sbjct: 129 YRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEA 178


>tr|A5BR34|A5BR34_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_038217 PE=4 SV=1
          Length = 209

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
 Frame = +3

Query: 180 PLLSLAAEFTQQKVETIYND--WMIDEMTLKNIYLCFSLFFVWGCCVFGSMKDPFYDSDL 353
           PL+++  E  + + + I +   W +++ T+KN+Y  + +F  WGCC FGS KDP+YDS+ 
Sbjct: 97  PLMAVLVEHVEGQRDLITHKSIWHLNDETIKNVYTFYIMFTCWGCCFFGSTKDPYYDSEQ 156

Query: 354 YRGVFFYPPRHWLYQKXXXXXXXXXXXXXXXXXXXXXXXXVGELRESKEA 503
           YR        HW+Y+K                        VG LRE +EA
Sbjct: 157 YRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEA 206


>tr|B6TFG6|B6TFG6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 181

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
 Frame = +3

Query: 129 KDNGSKRSNCSIPVAAMPLLSLAAEFTQQKVETIYND--WMIDEMTLKNIYLCFSLFFVW 302
           K +GS R      +  +PL+    E      + +     W + ++ LK++Y  +++F VW
Sbjct: 47  KRSGSARVGAFPSLDVVPLMVTMVEHVDMSRDYVVTKSIWHLSDVALKSVYTFYAMFTVW 106

Query: 303 GCCVFGSMKDPFYDSDLYRGVFFYPPRHWLYQKXXXXXXXXXXXXXXXXXXXXXXXXVGE 482
           G C F SMKDPFYDS+ YR        HW Y +                        VG 
Sbjct: 107 GVCFFASMKDPFYDSETYRSQGGDGTVHWYYDRQEDLEASAREELLREELLEEIEQRVGG 166

Query: 483 LRESKEAKE 509
           LRE +EA +
Sbjct: 167 LRELEEASK 175


>tr|Q6Z2U3|Q6Z2U3_ORYSJ Os02g0744000 protein OS=Oryza sativa subsp.
           japonica GN=OJ1734_E02.25 PE=2 SV=1
          Length = 181

 Score = 67.0 bits (162), Expect = 9e-10
 Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
 Frame = +3

Query: 138 GSKRSNCSIPVAAMPLLSLAAEFTQQKVETIYND--WMIDEMTLKNIYLCFSLFFVWGCC 311
           GS ++N S P+  + L+    E    + + + +   W + +  LK++Y  ++ F VWG C
Sbjct: 51  GSVKANAS-PLDVVTLMVTMVEHVDLQRDYVVHKSIWHLSDAALKSVYTFYAFFTVWGIC 109

Query: 312 VFGSMKDPFYDSDLYRGVFFYPPRHWLYQKXXXXXXXXXXXXXXXXXXXXXXXXVGELRE 491
            F SMKDPFYDS+ YRG       HW Y +                        VG LRE
Sbjct: 110 FFASMKDPFYDSEAYRGQGGDGTVHWYYDRQEDLEASAREELLREELLEEIEQRVGGLRE 169

Query: 492 SKEA 503
            +EA
Sbjct: 170 LEEA 173


>tr|B8AIF7|B8AIF7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08911 PE=4 SV=1
          Length = 181

 Score = 67.0 bits (162), Expect = 9e-10
 Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
 Frame = +3

Query: 138 GSKRSNCSIPVAAMPLLSLAAEFTQQKVETIYND--WMIDEMTLKNIYLCFSLFFVWGCC 311
           GS ++N S P+  + L+    E    + + + +   W + +  LK++Y  ++ F VWG C
Sbjct: 51  GSVKANAS-PLDVVTLMVTMVEHVDLQRDYVVHKSIWHLSDAALKSVYTFYAFFTVWGIC 109

Query: 312 VFGSMKDPFYDSDLYRGVFFYPPRHWLYQKXXXXXXXXXXXXXXXXXXXXXXXXVGELRE 491
            F SMKDPFYDS+ YRG       HW Y +                        VG LRE
Sbjct: 110 FFASMKDPFYDSEAYRGQGGDGTVHWYYDRQEDLEASAREELLREELLEEIEQRVGGLRE 169

Query: 492 SKEA 503
            +EA
Sbjct: 170 LEEA 173


>tr|A9PFW0|A9PFW0_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 180

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
 Frame = +3

Query: 180 PLLSLAAEFTQQKVETIYND--WMIDEMTLKNIYLCFSLFFVWGCCVFGSMKDPFYDSDL 353
           PL+++  E  + + + I +   W + +  +KN+Y+ + +F  WGC  FGSMKDP+YDS+ 
Sbjct: 68  PLMAVMVEHIEGQRDLITHKSIWHLSDRAIKNVYVFYLMFTCWGCLFFGSMKDPYYDSEA 127

Query: 354 YRGVFFYPPRHWLYQKXXXXXXXXXXXXXXXXXXXXXXXXVGELRESKEA 503
           YR        HW+Y K                        VG LRE +EA
Sbjct: 128 YRKDGGDGSGHWVYDKQDDIEESARAELWREELIEEIEQKVGGLRELEEA 177


>tr|B7FML9|B7FML9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 182

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
 Frame = +3

Query: 177 MPLLSLAAEFTQQKVETIYND--WMIDEMTLKNIYLCFSLFFVWGCCVFGSMKDPFYDSD 350
           +PL+++  E  + + + I     W + +  +KN+Y  + +F VWG   FGSMKDP+YDS+
Sbjct: 63  IPLMAILVEQLEGQRDLITEKTIWHLSDQQIKNVYAWYIMFTVWGVLFFGSMKDPYYDSE 122

Query: 351 LYRGVFFYPPRHWLYQKXXXXXXXXXXXXXXXXXXXXXXXXVGELRESKEA 503
            YRG       +W+Y+K                        VG LRE +EA
Sbjct: 123 TYRGDGGDGTGNWIYEKQEVMEAEAREALWREELIEEIEQKVGGLREIEEA 173


>tr|B6U6B2|B6U6B2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 116

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 31/90 (34%), Positives = 43/90 (47%)
 Frame = +3

Query: 240 WMIDEMTLKNIYLCFSLFFVWGCCVFGSMKDPFYDSDLYRGVFFYPPRHWLYQKXXXXXX 419
           W + ++ LK++Y  +++F VWG C F SMKDPFYDS+ YR        HW Y +      
Sbjct: 21  WHLSDVALKSVYTFYAMFTVWGVCFFASMKDPFYDSETYRSQGGDGTVHWYYDRQEDLEA 80

Query: 420 XXXXXXXXXXXXXXXXXXVGELRESKEAKE 509
                             VG LRE +EA +
Sbjct: 81  SAREELLREELLEEIEQRVGGLRELEEASK 110


>tr|Q8RXS1|Q8RXS1_ARATH Putative uncharacterized protein At1g18730
           OS=Arabidopsis thaliana GN=At1g18730 PE=2 SV=1
          Length = 175

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
 Frame = +3

Query: 177 MPLLSLAAEFTQ--QKVETIYNDWMIDEMTLKNIYLCFSLFFVWGCCVFGSMKDPFYDSD 350
           +PL+++  +  +  + + T  + W + +  +KN+Y+ + +F  WGC  FGS KDPFYDS+
Sbjct: 62  LPLMAVMVQQIEGMRDIITEKHVWHLSDKAIKNVYMFYIMFTCWGCLYFGSAKDPFYDSE 121

Query: 351 LYRGVFFYPPRHWLYQKXXXXXXXXXXXXXXXXXXXXXXXXVGELRESKEA 503
            YRG       +W+Y+                         VG LRE +EA
Sbjct: 122 EYRGDGGDGTGYWVYETQEDIEEKARAELWREELIEEIEQKVGGLRELEEA 172


>tr|Q9M9U4|Q9M9U4_ARATH F6A14.16 protein OS=Arabidopsis thaliana
           GN=F6A14.16 PE=4 SV=1
          Length = 108

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 30/88 (34%), Positives = 42/88 (47%)
 Frame = +3

Query: 240 WMIDEMTLKNIYLCFSLFFVWGCCVFGSMKDPFYDSDLYRGVFFYPPRHWLYQKXXXXXX 419
           W + +  +KN+Y+ + +F  WGC  FGS KDPFYDS+ YRG       +W+Y+       
Sbjct: 18  WHLSDKAIKNVYMFYIMFTCWGCLYFGSAKDPFYDSEEYRGDGGDGTGYWVYETQEDIEE 77

Query: 420 XXXXXXXXXXXXXXXXXXVGELRESKEA 503
                             VG LRE +EA
Sbjct: 78  KARAELWREELIEEIEQKVGGLRELEEA 105