DK951133 |
Clone id |
TST38A01NGRL0010_J08 |
Library |
TST38 |
Length |
654 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_J08. 5' end sequence. |
Accession |
DK951133 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL932Contig1 |
Sequence |
CCGGCGCTATGTGGAGATCGGACGAGTGGCCATGGTGAACTACGGCCCCAGCTATGGAAA GCTTGTTGTGATCGTCGATGTCGTTGATCAGAACAGGGCCCTTGTTGATGCCCCTGACAT GGTCCGCGGTGCTATGAATTTCAAGAGGCTTTCGTTAACTGATCTCGTAGTCGAGATACC TAGGATGCCCAAGAAGAAGCAGCTAGCTGATGCCGTTGAAGCTGCAGATATTCACAACAA ATGGGCTAACAGCTCGTGGGGAAGGAAACTAATTGTGCAAAAGAAGCGTGCTTCTCTTAA TGACTTTGATCGATTCAAGGTTATGGTGGCCCGGATCAAGAGAGGCTCCATCATCAAAAG AGAATTGGCAAAATTAAGAAAGGAGAAAGCTTAGCTTGCTTTTGCACTATCTCAAAGCAA ATACACTGGCTTTTTGGATAGTAGTTCTATATTGAACAACAGGCTGTAGTACAGCAGCAA AGTTTTTAAATGTAAAATAGGAGAGCCATTTAAGCTATACCATTTTTGGCATCGTGTCTG GTTGTGGGTTTGGGGTGGGGTATTTTCATTCTGGCATATTTGAAATTAAGCTGTGTATTT TCGAATGTGAATTGTCAAGGTCAATAAAGGAGCAATCTTAGTAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9T043 |
Definition |
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana |
Align length |
118 |
Score (bit) |
181.0 |
E-value |
3.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951133|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_J08, 5' (642 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis... 181 3e-45 sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis... 180 5e-45 sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum s... 176 1e-43 sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus G... 122 1e-27 sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RP... 122 2e-27 sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=... 122 2e-27 sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicu... 121 4e-27 sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens G... 120 6e-27 sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rube... 110 6e-24 sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia ja... 105 2e-22 sp|O94238|RL14_SCHPO 60S ribosomal protein L14 OS=Schizosaccharo... 102 2e-21 sp|P38754|RL14B_YEAST 60S ribosomal protein L14-B OS=Saccharomyc... 92 2e-18 sp|P36105|RL14A_YEAST 60S ribosomal protein L14-A OS=Saccharomyc... 92 2e-18 sp|Q54Z09|RL14_DICDI 60S ribosomal protein L14 OS=Dictyostelium ... 83 1e-15 sp|P55841|RL14_DROME 60S ribosomal protein L14 OS=Drosophila mel... 82 2e-15 sp|Q95ZE8|RL14_DROVI 60S ribosomal protein L14 OS=Drosophila vir... 80 1e-14 sp|P55843|RL14_TRYCO Probable 60S ribosomal protein L14 OS=Trypa... 62 2e-09 sp|Q25278|RL14_LEIDO Probable 60S ribosomal protein L14 OS=Leish... 62 3e-09 sp|P55842|RL14_TRYBB Probable 60S ribosomal protein L14 OS=Trypa... 61 4e-09 sp|A4WH36|RL14E_PYRAR 50S ribosomal protein L14e OS=Pyrobaculum ... 49 2e-05 sp|Q8ZYB4|RL14E_PYRAE 50S ribosomal protein L14e OS=Pyrobaculum ... 47 6e-05 sp|A1RTL6|RL14E_PYRIL 50S ribosomal protein L14e OS=Pyrobaculum ... 47 1e-04 sp|P54054|RL14E_METJA 50S ribosomal protein L14e OS=Methanocaldo... 47 1e-04 sp|Q8TX43|RL14E_METKA 50S ribosomal protein L14e OS=Methanopyrus... 46 2e-04 sp|Q4JAJ9|RL14E_SULAC 50S ribosomal protein L14e OS=Sulfolobus a... 45 3e-04 sp|Q8U2L5|RL14E_PYRFU 50S ribosomal protein L14e OS=Pyrococcus f... 45 4e-04 sp|A3MS76|RL14E_PYRCJ 50S ribosomal protein L14e OS=Pyrobaculum ... 45 4e-04 sp|Q9YDD7|RL14E_AERPE 50S ribosomal protein L14e OS=Aeropyrum pe... 44 7e-04 sp|A8ABY5|RL14E_IGNH4 50S ribosomal protein L14e OS=Ignicoccus h... 44 0.001 sp|P59937|RL14E_PYRHO 50S ribosomal protein L14e OS=Pyrococcus h... 43 0.001
>sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1 Length = 134
Score = 181 bits (459), Expect = 3e-45 Identities = 86/118 (72%), Positives = 104/118 (88%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDLVVEIP 181 +RYVEIGRVA+VNYG +GKLVVIVDVVDQNRALVDAPDM R MNFKRLSLTD+V++I Sbjct: 4 KRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDIN 63
Query: 182 RMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 R+PKKK L +A+E AD+ NKW SSWGRKLIVQK+RA+LNDFDRFK+M+A+IK+ ++ Sbjct: 64 RVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVV 121
>sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1 Length = 134
Score = 180 bits (457), Expect = 5e-45 Identities = 87/118 (73%), Positives = 103/118 (87%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDLVVEIP 181 +R+VEIGRVA+VNYG YGKLVVIVDVVDQNRALVDAPDM R MN KRLSLTD+V++I Sbjct: 4 KRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDIN 63
Query: 182 RMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 R+PKKK L +A+E AD+ NKW SSWGRKLIVQK+RA+LNDFDRFK+M+A+IKR I+ Sbjct: 64 RVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIV 121
>sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1 Length = 133
Score = 176 bits (445), Expect = 1e-43 Identities = 83/116 (71%), Positives = 101/116 (87%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDLVVEIP 181 +R+VEIGRVA++NYG YG+LVVIVDV+DQ RALVDAPDM R +NFKRLSLTDL ++I Sbjct: 4 KRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKIDIK 63
Query: 182 RMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGS 349 R+PKKK L A+EAAD+ NKWA SSWGRKLIV+K RA+LNDFDRFK+M+A+IKR + Sbjct: 64 RVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAA 119
>sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3 Length = 217
Score = 122 bits (307), Expect = 1e-27 Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 2/120 (1%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDLVVE 175 RRYVE+GRVA +++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD +++ Sbjct: 4 RRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILK 63
Query: 176 IPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 P ++K + A E ADI+ KWA + W +K+ ++++A + DFDRFKVM A+ R II Sbjct: 64 FPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRII 123
>sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1 Length = 213
Score = 122 bits (305), Expect = 2e-27 Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 2/120 (1%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDLVVE 175 RR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD +++ Sbjct: 4 RRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILK 63
Query: 176 IPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 P ++K + A E ADI+ KWA + W +K+ ++K+A + DFDR+KVM AR R +I Sbjct: 64 FPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRLI 123
>sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3 Length = 214
Score = 122 bits (305), Expect = 2e-27 Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 2/120 (1%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDLVVE 175 RR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD +++ Sbjct: 4 RRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILK 63
Query: 176 IPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 P ++K + A E ADI+ KWA + W +K+ ++K+A + DFDR+KVM AR R +I Sbjct: 64 FPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRLI 123
>sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3 Length = 214
Score = 121 bits (303), Expect = 4e-27 Identities = 60/120 (50%), Positives = 84/120 (70%), Gaps = 2/120 (1%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDLVVE 175 RR+VE+GRVA +++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD +++ Sbjct: 4 RRFVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILK 63
Query: 176 IPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 P ++K + A E ADI+ KWA + W +K+ ++++A + DFDRFKVM A+ R II Sbjct: 64 FPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRII 123
>sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4 Length = 215
Score = 120 bits (301), Expect = 6e-27 Identities = 60/120 (50%), Positives = 83/120 (69%), Gaps = 2/120 (1%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDLVVE 175 RR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD +++ Sbjct: 4 RRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILK 63
Query: 176 IPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 P +K + A + ADI+ KWA + W +K+ ++++A + DFDRFKVM A+ R II Sbjct: 64 FPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRII 123
>sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1 Length = 152
Score = 110 bits (275), Expect = 6e-24 Identities = 59/120 (49%), Positives = 76/120 (63%), Gaps = 2/120 (1%) Frame = +2
Query: 2 RRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDLVVE 175 RR+VEIGRVA YGP GKLV IVDV+DQNRALVD P + R +MNFK L LT+L + Sbjct: 4 RRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNLKAK 63
Query: 176 IPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 P K + A E +I KW S +K+ ++KR +L DF+RFK+M A+ R +I Sbjct: 64 FPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLI 123
>sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1 Length = 133
Score = 105 bits (263), Expect = 2e-22 Identities = 58/120 (48%), Positives = 81/120 (67%), Gaps = 3/120 (2%) Frame = +2
Query: 5 RYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPD--MVRGAMNFKRLSLTDLVV-E 175 R+VE GRVA+V+YG KLVVIVD++DQNR LVD+P + R +N KR++LT + V + Sbjct: 5 RFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSIKVDD 64
Query: 176 IPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSII 355 I R ++ AA + +A S WG+KL ++KRA+L+DF RFKVMVAR+K+ I Sbjct: 65 IARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSKAI 124
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRN0 |
Definition |
tr|B8LRN0|B8LRN0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
118 |
Score (bit) |
191.0 |
E-value |
2.0e-47 |
Report |
|