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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951144
Clone id TST38A01NGRL0010_J19
Library
Length 569
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_J19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTCCATAG
CCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCT
TCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCT
CTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCG
AGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCA
TGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAG
AGTTTTTTTTTCCCCCCCCCCCCTACGATGGGCGGTACTGGGAAGAAAAAAAGAGGAGGG
GGGGGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGG
AGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCT
CCGGCTTCCTTGTCCAGAAGCCCTCTGTC
■■Homology search results ■■ -
sp_hit_id P17673
Definition sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens
Align length 158
Score (bit) 156.0
E-value 8.0e-38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951144|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_J19, 5'
         (569 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   156   8e-38
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   154   2e-37
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   154   2e-37
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   154   2e-37
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   153   7e-37
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   153   7e-37
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   153   7e-37
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   152   1e-36
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   152   1e-36
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   151   2e-36
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   150   3e-36
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   150   4e-36
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   150   4e-36
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   149   7e-36
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   149   1e-35
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   149   1e-35
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   149   1e-35
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   149   1e-35
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   148   2e-35
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   148   2e-35
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   148   2e-35
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   148   2e-35
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   148   2e-35
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   147   3e-35
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   147   3e-35
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   147   4e-35
sp|P04714|RBS1_PETHY Ribulose bisphosphate carboxylase small cha...   147   4e-35
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   147   5e-35
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   147   5e-35
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   146   6e-35

>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  156 bits (394), Expect = 8e-38
 Identities = 82/158 (51%), Positives = 106/158 (67%), Gaps = 4/158 (2%)
 Frame = +3

Query: 108 LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 278
           L+  F+GLK++  F   K  N +    SNGSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 279 IAKQVDFMVRKGWTPCIEFD-KIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVL 455
           + K+V++++RKGW PC+EF+ + G V+R++   P  YDGRYW    R   FG  DAA VL
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYW-TMWRLPLFGTTDAAQVL 139

Query: 456 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPSV 569
           +E+AEC  EYPEAFIR++GFD  RQVQ   F+   P V
Sbjct: 140 KEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  154 bits (390), Expect = 2e-37
 Identities = 78/149 (52%), Positives = 96/149 (64%)
 Frame = +3

Query: 117 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 296
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 297 FMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIAECA 476
           +++R GW PCIEF K+G VYRE+   P  YDGRYW   K    FGC D++ VL+E+ EC+
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWK-LPMFGCTDSSQVLKEVDECS 146

Query: 477 KEYPEAFIRVLGFDAKRQVQVSGFLVQKP 563
           K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 147 KAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  154 bits (390), Expect = 2e-37
 Identities = 81/153 (52%), Positives = 100/153 (65%), Gaps = 4/153 (2%)
 Frame = +3

Query: 120 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 287
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 288 QVDFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIA 467
           +VD+++R  W PCIEF K G VYRE    P  YDGRYW   K    FGC DA+ V+ E+ 
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWK-LPMFGCTDASQVIAEVE 144

Query: 468 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
           E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 145 EAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  154 bits (390), Expect = 2e-37
 Identities = 81/153 (52%), Positives = 100/153 (65%), Gaps = 4/153 (2%)
 Frame = +3

Query: 120 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 287
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 288 QVDFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIA 467
           +VD+++R  W PCIEF K G VYRE    P  YDGRYW   K    FGC DA+ V+ E+ 
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWK-LPMFGCTDASQVIAEVE 144

Query: 468 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
           E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 145 EAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  153 bits (386), Expect = 7e-37
 Identities = 79/150 (52%), Positives = 100/150 (66%), Gaps = 1/150 (0%)
 Frame = +3

Query: 123 SGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 302
           +GLKA              +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 303 VRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIAECAKE 482
           ++ GW PCIEFD  G+V RE    P  YDGRYW   K    FGC D+A+VLREI EC K 
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWK-LPMFGCTDSASVLREIEECKKL 150

Query: 483 Y-PEAFIRVLGFDAKRQVQVSGFLVQKPSV 569
           Y  + +IR LGFD  RQVQ + F+V +P++
Sbjct: 151 YGKKCYIRCLGFDNTRQVQCASFIVHQPTL 180


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  153 bits (386), Expect = 7e-37
 Identities = 80/157 (50%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
 Frame = +3

Query: 108 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 275
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 276 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAV 452
            ++K++D+++R  W PC+EF+ + G VYRE    P  YDGRYW   K    FGC D+A V
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWK-LPMFGCTDSAQV 140

Query: 453 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 563
           ++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  153 bits (386), Expect = 7e-37
 Identities = 82/153 (53%), Positives = 103/153 (67%), Gaps = 5/153 (3%)
 Frame = +3

Query: 120 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 287
           F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 288 QVDFMVRKGWTPCIEFD-KIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREI 464
           +VD+++RK   PC+EF+ + G VYRE    P  YDGRYW   K    FGC D++ VL+E+
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWK-LPMFGCNDSSQVLKEL 146

Query: 465 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 563
            EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 147 EECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  152 bits (384), Expect = 1e-36
 Identities = 78/151 (51%), Positives = 96/151 (63%), Gaps = 3/151 (1%)
 Frame = +3

Query: 120 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 290
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 291 VDFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIAE 470
           VD+++R GW PC+EF K+G VYRE    P  YDGRYW   K    FGC DA  V +E+ E
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWK-LPMFGCNDATQVYKELQE 135

Query: 471 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 563
             K YP+AF RV+GFD  +Q Q   F+  KP
Sbjct: 136 AIKSYPDAFHRVIGFDNIKQTQCVSFIAYKP 166


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  152 bits (383), Expect = 1e-36
 Identities = 79/157 (50%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
 Frame = +3

Query: 117 SFSGLKATTLFAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 272
           +F+GLK+T  F    K  N  A       SNG RV  M VW P+ N KFETLSYLP L+ 
Sbjct: 15  AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 273 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAV 452
           EQ+ K+V++++R  W PC+EFD  GS+ R++   P  YDGRYW   K    FGC +A+ V
Sbjct: 75  EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWK-LPMFGCTEASQV 133

Query: 453 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 563
           + E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 134 INEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  151 bits (382), Expect = 2e-36
 Identities = 80/154 (51%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
 Frame = +3

Query: 120 FSGLKATTLF-----APKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 284
           F+GL+++  F     A K+ + L  SNG +VS M VW P   KKFETLSYLPPLS E +A
Sbjct: 26  FNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 84

Query: 285 KQVDFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREI 464
           K+VD+++R  W PCIEF K G VYRE    P  YDGRYW   K    FGC DA+ V+ E+
Sbjct: 85  KEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWK-LPMFGCTDASQVIAEV 143

Query: 465 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 144 EEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 153
Score (bit) 246.0
E-value 6.0e-64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951144|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_J19, 5'
         (569 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   246   6e-64
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   169   1e-40
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   165   2e-39
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   165   2e-39
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   165   2e-39
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   162   9e-39
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   159   8e-38
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   159   1e-37
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   158   2e-37
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   158   2e-37
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   157   4e-37
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   157   4e-37
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   156   7e-37
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   154   3e-36
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   154   3e-36
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   154   4e-36
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   154   4e-36
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   153   6e-36
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...   153   7e-36
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   152   1e-35
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   152   1e-35
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   152   2e-35
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   152   2e-35
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   152   2e-35

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  246 bits (628), Expect = 6e-64
 Identities = 123/153 (80%), Positives = 133/153 (86%)
 Frame = +3

Query: 108 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 287
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 288 QVDFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIA 467
           QV++MVRKGWTPCIEFD IGSVYRE F     YDGRYW   K    FGC D+ +VLREIA
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWK-LPMFGCTDSGSVLREIA 140

Query: 468 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
           ECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 141 ECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  172 bits (435), Expect = 2e-41
 Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 3/154 (1%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPP---YDGRYWEEKKRRGGFGCQDAAAVLREI 464
           DFM+++   PCIEFD +GSV R  F  P     YDGRYW   K    FGC D+A VLREI
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWK-LPMFGCTDSAQVLREI 145

Query: 465 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 146 QECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  169 bits (427), Expect = 1e-40
 Identities = 86/154 (55%), Positives = 106/154 (68%), Gaps = 3/154 (1%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPP---YDGRYWEEKKRRGGFGCQDAAAVLREI 464
           DFM+++   PCIEFD +GSV R  F  P     YDGRYW   K    FGC D+A VLREI
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWK-LPMFGCTDSAQVLREI 145

Query: 465 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 146 QECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  165 bits (417), Expect = 2e-39
 Identities = 82/154 (53%), Positives = 106/154 (68%), Gaps = 3/154 (1%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPP---YDGRYWEEKKRRGGFGCQDAAAVLREI 464
           D+M+++   PCIEFD +GSV R  F        YDGRYW   K    FGC D++ VLREI
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWK-LPMFGCTDSSQVLREI 180

Query: 465 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 181 QECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  165 bits (417), Expect = 2e-39
 Identities = 83/154 (53%), Positives = 104/154 (67%), Gaps = 3/154 (1%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPP---YDGRYWEEKKRRGGFGCQDAAAVLREI 464
           D+M+++   PCIEFD +G+V R  F        YDGRYW   K    FGC D++ VLREI
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWK-LPMFGCTDSSQVLREI 150

Query: 465 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            EC   YP  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 151 QECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  165 bits (417), Expect = 2e-39
 Identities = 83/154 (53%), Positives = 105/154 (68%), Gaps = 3/154 (1%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPP---YDGRYWEEKKRRGGFGCQDAAAVLREI 464
           D+M+++   PCIEFD +GSV R  F        YDGRYW   K    FGC D++ VLREI
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWK-LPMFGCTDSSQVLREI 150

Query: 465 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 151 QECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  162 bits (411), Expect = 9e-39
 Identities = 81/151 (53%), Positives = 102/151 (67%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIAEC 473
           ++M+++   PC+EFD    V R     P  YDGRYW   K    FGCQD+A VLREI EC
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWK-LPMFGCQDSAQVLREIEEC 150

Query: 474 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 151 KKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  162 bits (410), Expect = 1e-38
 Identities = 80/154 (51%), Positives = 106/154 (68%), Gaps = 3/154 (1%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPP---YDGRYWEEKKRRGGFGCQDAAAVLREI 464
           D+M+++   PCIEFD +GSV R  F        YDGRYW   K    FGC D++ VLREI
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWK-LPMFGCTDSSQVLREI 149

Query: 465 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 150 QECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  162 bits (410), Expect = 1e-38
 Identities = 82/151 (54%), Positives = 102/151 (67%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIAEC 473
           D+M+++   PC+EFD    V R     P  YDGRYW   K    FGCQD A VLREI EC
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWK-LPMFGCQDPAQVLREIEEC 150

Query: 474 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 151 KKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  162 bits (410), Expect = 1e-38
 Identities = 82/151 (54%), Positives = 103/151 (68%)
 Frame = +3

Query: 114 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 293
           K+FSGLK+ TLF+ +S    ++ NGSRV+ M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 294 DFMVRKGWTPCIEFDKIGSVYREFFFPPPPYDGRYWEEKKRRGGFGCQDAAAVLREIAEC 473
           ++M+++   PC+EFD    V RE    P  YDGRYW   K    FGCQD+A VLREI EC
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWK-LPMFGCQDSAQVLREIEEC 150

Query: 474 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 566
            K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 151 KKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181