DK951148 |
Clone id |
TST38A01NGRL0010_J24 |
Library |
TST38 |
Length |
673 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_J24. 5' end sequence. |
Accession |
DK951148 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GGTTGAATGCATCAGATGTTGGAGACAAAAGCAAGTGGCTGAAGGAAGGAATGGAGTGCA ATGTACTAACATGGAATGGAAGAGTAATAGATGTAGAGGTACCGTTGACAGTTAAGCTAC AAGTTAGTGAGACTGACCCGGGCATGAAGAGTGACACAGCACAAGGAGGGTCAAAGCCTG CTACACTTGAGACCGGGGCTGTCGTGAACGTGCCCCTCTTCATAAACATTGGAGAGGTGA TCGCAATAGATACAAGGTCCGGAACTTATTCGGGCCGTGCATAATGTGCAAGTCGACCGA CCACCCTTGAGCTTAATCTGCCGAGTCATCGAATGGAATCAACGAGGAGTTGCCTCTGGT GGAGGTCTTTTGAGGCATTCTTGGAGAGTGAAGACAGGAAGCTTTTGTTGATATTTACAA GCTGATATATTTGATCAAGGCTTGTTTTCCTCTTCACCACAAGCATACCAGCGTCCCGAG CTTTTTGACACGATTTCAAGTGAGCTTTACTTTGTAATAACGTTCTTTATACTTCTTTCT AGACAAGGCACTAACTTTACAAGAGCGTTTTTTCTCTCTCCATTTTCCTAAGGAGAAGCC TCTTTTGTATCAAGTATCTAGGGTATGCTGCCTTAATTCTTTCTTCCAATGACAACAAGG GTTCTTCTCTTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5N1T5 |
Definition |
sp|Q5N1T5|EFP_SYNP6 Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) |
Align length |
92 |
Score (bit) |
124.0 |
E-value |
4.0e-28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QFN9 |
Definition |
tr|A7QFN9|A7QFN9_VITVI Chromosome chr8 scaffold_88, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
93 |
Score (bit) |
147.0 |
E-value |
8.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951148|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_J24, 5' (673 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QFN9|A7QFN9_VITVI Chromosome chr8 scaffold_88, whole genome... 147 8e-34 tr|A9S5H7|A9S5H7_PHYPA Predicted protein OS=Physcomitrella paten... 137 8e-31 tr|B6UC94|B6UC94_MAIZE Elongation factor P OS=Zea mays PE=2 SV=1 134 7e-30 tr|Q9C9Y5|Q9C9Y5_ARATH Putative elongation factor P (EF-P); 6683... 133 9e-30 tr|Q8VZW6|Q8VZW6_ARATH Putative elongation factor P (EF-P) OS=Ar... 133 9e-30 tr|Q2RBC6|Q2RBC6_ORYSJ Elongation factor P, putative, expressed ... 133 9e-30 tr|Q2QYK4|Q2QYK4_ORYSJ Os12g0115900 protein OS=Oryza sativa subs... 133 9e-30 tr|B8BNX1|B8BNX1_ORYSI Putative uncharacterized protein OS=Oryza... 133 9e-30 tr|A3CEC8|A3CEC8_ORYSJ Putative uncharacterized protein OS=Oryza... 133 9e-30 tr|A2ZAT7|A2ZAT7_ORYSI Putative uncharacterized protein OS=Oryza... 133 9e-30 tr|A9P273|A9P273_PICSI Putative uncharacterized protein OS=Picea... 129 2e-28 tr|B4B801|B4B801_9CHRO Translation elongation factor P OS=Cyanot... 122 2e-26 tr|A0Y8S0|A0Y8S0_9GAMM Elongation factor P OS=marine gamma prote... 122 3e-26 tr|A3Z3X6|A3Z3X6_9SYNE Elongation factor P OS=Synechococcus sp. ... 120 6e-26 tr|A0YPV6|A0YPV6_9CYAN Elongation factor P OS=Lyngbya sp. PCC 81... 120 8e-26 tr|B1XKV1|B1XKV1_SYNP2 Translation elongation factor P OS=Synech... 120 1e-25 tr|B4WQQ8|B4WQQ8_9SYNE Translation elongation factor P OS=Synech... 119 2e-25 tr|A8YFW6|A8YFW6_MICAE Elongation factor P OS=Microcystis aerugi... 119 2e-25 tr|B5IIZ9|B5IIZ9_9CHRO Translation elongation factor P OS=Cyanob... 118 3e-25 tr|B4VZ25|B4VZ25_9CYAN Translation elongation factor P OS=Microc... 118 3e-25 tr|A4CWR1|A4CWR1_SYNPV Elongation factor P OS=Synechococcus sp. ... 117 5e-25 tr|A3YWJ1|A3YWJ1_9SYNE Elongation factor P OS=Synechococcus sp. ... 117 7e-25 tr|Q062J3|Q062J3_9SYNE Elongation factor P OS=Synechococcus sp. ... 116 1e-24 tr|B5W8H5|B5W8H5_SPIMA Translation elongation factor P OS=Arthro... 115 2e-24 tr|A4A8Q5|A4A8Q5_9GAMM Elongation factor P OS=Congregibacter lit... 115 2e-24 tr|B1X4J2|B1X4J2_PAUCH Elongation factor P OS=Paulinella chromat... 115 2e-24 tr|B8KJU7|B8KJU7_9GAMM Translation elongation factor P OS=gamma ... 114 4e-24 tr|B7KGU8|B7KGU8_9CHRO Translation elongation factor P OS=Cyanot... 114 4e-24 tr|A9B9I2|A9B9I2_PROM4 Elongation factor P OS=Prochlorococcus ma... 114 6e-24 tr|Q05US4|Q05US4_9SYNE Elongation factor P OS=Synechococcus sp. ... 114 6e-24
>tr|A7QFN9|A7QFN9_VITVI Chromosome chr8 scaffold_88, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037495001 PE=4 SV=1 Length = 193
Score = 147 bits (370), Expect = 8e-34 Identities = 65/93 (69%), Positives = 81/93 (87%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN SDVG+++KWLKEGM+CNVL WNG++ID E+P+T+KL V + DPG+K DTAQGGSKPA Sbjct: 101 LNESDVGERTKWLKEGMDCNVLFWNGKIIDFELPITIKLTVVDVDPGIKGDTAQGGSKPA 160
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 TL+TGAVVNVPLF+NIG+ I +DTR+G Y RA Sbjct: 161 TLDTGAVVNVPLFVNIGDQILVDTRTGEYRSRA 193
>tr|A9S5H7|A9S5H7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74849 PE=4 SV=1 Length = 239
Score = 137 bits (344), Expect = 8e-31 Identities = 60/92 (65%), Positives = 78/92 (84%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 + A ++GDK+KWLKEGMECNVLTWN +V+DV++P+TV ++V +TDPG+K DTAQGGSKPA Sbjct: 144 IGAKELGDKTKWLKEGMECNVLTWNDKVLDVDLPITVVVKVVQTDPGLKGDTAQGGSKPA 203
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGR 278 T ETGAVV+VPLF+N G++I +DTR Y R Sbjct: 204 TTETGAVVSVPLFVNEGDMIQVDTRKSEYMSR 235
>tr|B6UC94|B6UC94_MAIZE Elongation factor P OS=Zea mays PE=2 SV=1 Length = 234
Score = 134 bits (336), Expect = 7e-30 Identities = 60/93 (64%), Positives = 79/93 (84%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN +DVGDK KWLKEGM+CN+L WNG++ID ++P+TV+L V++TDPG SD+AQGG+KPA Sbjct: 143 LNEADVGDKQKWLKEGMDCNLLYWNGKIIDFDLPITVRLTVTDTDPG-ASDSAQGGTKPA 201
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 TLETGAVV VP F+N+G+ I +D+R+G Y RA Sbjct: 202 TLETGAVVTVPSFVNVGDDILVDSRTGQYMNRA 234
>tr|Q9C9Y5|Q9C9Y5_ARATH Putative elongation factor P (EF-P); 66839-65711 OS=Arabidopsis thaliana GN=F17O14.21 PE=4 SV=1 Length = 184
Score = 133 bits (335), Expect = 9e-30 Identities = 59/93 (63%), Positives = 77/93 (82%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN SD+G+K+KWLKEGM+C +L W +VID ++P+TVKL+V + DPG++ DT QGGSKPA Sbjct: 92 LNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPITVKLKVVDVDPGLRGDTVQGGSKPA 151
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 T+ETGA+V VPLFIN+GE I +DTR+G Y RA Sbjct: 152 TMETGAIVAVPLFINVGEEIFVDTRTGAYMNRA 184
>tr|Q8VZW6|Q8VZW6_ARATH Putative elongation factor P (EF-P) OS=Arabidopsis thaliana GN=At3g08740 PE=2 SV=1 Length = 236
Score = 133 bits (335), Expect = 9e-30 Identities = 59/93 (63%), Positives = 77/93 (82%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN SD+G+K+KWLKEGM+C +L W +VID ++P+TVKL+V + DPG++ DT QGGSKPA Sbjct: 144 LNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPITVKLKVVDVDPGLRGDTVQGGSKPA 203
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 T+ETGA+V VPLFIN+GE I +DTR+G Y RA Sbjct: 204 TMETGAIVAVPLFINVGEEIFVDTRTGAYMNRA 236
>tr|Q2RBC6|Q2RBC6_ORYSJ Elongation factor P, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0116400 PE=2 SV=1 Length = 229
Score = 133 bits (335), Expect = 9e-30 Identities = 60/93 (64%), Positives = 79/93 (84%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN SDVGD+ KWLKEGM+CN+L WNGR+ID ++P+TV+L V++TDPG + D+AQGG+KPA Sbjct: 138 LNESDVGDRQKWLKEGMDCNLLYWNGRIIDFDLPITVRLTVTDTDPG-QGDSAQGGTKPA 196
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 T+ETGAVV VP F+N+G+ I ID+R+G Y RA Sbjct: 197 TVETGAVVTVPSFVNVGDDILIDSRTGQYMNRA 229
>tr|Q2QYK4|Q2QYK4_ORYSJ Os12g0115900 protein OS=Oryza sativa subsp. japonica GN=Os12g0115900 PE=2 SV=2 Length = 229
Score = 133 bits (335), Expect = 9e-30 Identities = 60/93 (64%), Positives = 79/93 (84%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN SDVGD+ KWLKEGM+CN+L WNGR+ID ++P+TV+L V++TDPG + D+AQGG+KPA Sbjct: 138 LNESDVGDRQKWLKEGMDCNLLYWNGRIIDFDLPITVRLTVTDTDPG-QGDSAQGGTKPA 196
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 T+ETGAVV VP F+N+G+ I ID+R+G Y RA Sbjct: 197 TVETGAVVTVPSFVNVGDDILIDSRTGQYMNRA 229
>tr|B8BNX1|B8BNX1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37231 PE=4 SV=1 Length = 228
Score = 133 bits (335), Expect = 9e-30 Identities = 60/93 (64%), Positives = 79/93 (84%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN SDVGD+ KWLKEGM+CN+L WNGR+ID ++P+TV+L V++TDPG + D+AQGG+KPA Sbjct: 137 LNESDVGDRQKWLKEGMDCNLLYWNGRIIDFDLPITVRLTVTDTDPG-QGDSAQGGTKPA 195
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 T+ETGAVV VP F+N+G+ I ID+R+G Y RA Sbjct: 196 TVETGAVVTVPSFVNVGDDILIDSRTGQYMNRA 228
>tr|A3CEC8|A3CEC8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033650 PE=4 SV=1 Length = 241
Score = 133 bits (335), Expect = 9e-30 Identities = 60/93 (64%), Positives = 79/93 (84%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN SDVGD+ KWLKEGM+CN+L WNGR+ID ++P+TV+L V++TDPG + D+AQGG+KPA Sbjct: 150 LNESDVGDRQKWLKEGMDCNLLYWNGRIIDFDLPITVRLTVTDTDPG-QGDSAQGGTKPA 208
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 T+ETGAVV VP F+N+G+ I ID+R+G Y RA Sbjct: 209 TVETGAVVTVPSFVNVGDDILIDSRTGQYMNRA 241
>tr|A2ZAT7|A2ZAT7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34873 PE=4 SV=1 Length = 229
Score = 133 bits (335), Expect = 9e-30 Identities = 60/93 (64%), Positives = 79/93 (84%) Frame = +3
Query: 3 LNASDVGDKSKWLKEGMECNVLTWNGRVIDVEVPLTVKLQVSETDPGMKSDTAQGGSKPA 182 LN SDVGD+ KWLKEGM+CN+L WNGR+ID ++P+TV+L V++TDPG + D+AQGG+KPA Sbjct: 138 LNESDVGDRQKWLKEGMDCNLLYWNGRIIDFDLPITVRLTVTDTDPG-QGDSAQGGTKPA 196
Query: 183 TLETGAVVNVPLFINIGEVIAIDTRSGTYSGRA 281 T+ETGAVV VP F+N+G+ I ID+R+G Y RA Sbjct: 197 TVETGAVVTVPSFVNVGDDILIDSRTGQYMNRA 229
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