DK951152 |
Clone id |
TST38A01NGRL0010_K05 |
Library |
TST38 |
Length |
651 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_K05. 5' end sequence. |
Accession |
DK951152 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
AATCAAGACCCTAGGTGCATGATGCTCTTGCTCTATCAACGGAGCTAGCATTGATTGATA GTTTAGAGATGAGCTGAGCCCAAAGGAAAAGACAACACCGATGGCCTTCGAGGGGACAAC TGCAAAGGTGGCCGATAGGCTTTCTCAGAGTGTCCTCTCCGTCCACAACCTTGCAGAGCT CATCCGTAACACCTCCCCTATCCAGGCTAATGCTAAGCTGCCCAAGGAACTATTGGCAAA AGCTTCAAGCATCAAGAATATAGGAGTGCTTCTGCAGCAAATGCCAGGGGTTATTGCTGC CTTGGATGCTCATTCAGATAAGTCTCTTGTAAGCTTCTCAGAACTAGAGACGATCCTTTC GCTTTTGAACCAGCAGACGAATGCAGACAAGCAGTCAAATCCTTGAAAAGATGGAAATCA GCAAGATCTTTGATTACTTGTCAACTATTGCGTTCAGCCCTTGTTCCATCTATTATTTTT GTACATTCGGATAGTTTAACATGCTTTACCTTCCACTTGTACATTACAAATTGAGCTTTA AGATTGCTTTTTCAGTTCCTTGGTACTGCGTACTGCTGAGACCTTGGGACCGCTGAAGAC TATAAATGACTTTGGAAAAATTGTATTTTTATATGAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8YVT9 |
Definition |
sp|Q8YVT9|TGT_ANASP Queuine tRNA-ribosyltransferase OS=Anabaena sp. (strain PCC 7120) |
Align length |
56 |
Score (bit) |
31.6 |
E-value |
3.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ET30 |
Definition |
tr|Q6ET30|Q6ET30_ORYSJ Putative tobamovirus multiplication protein 2B (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica |
Align length |
96 |
Score (bit) |
84.7 |
E-value |
4.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951152|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_K05, 5' (635 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ET30|Q6ET30_ORYSJ Putative tobamovirus multiplication prote... 85 4e-15 tr|Q0E223|Q0E223_ORYSJ Os02g0279600 protein OS=Oryza sativa subs... 85 4e-15 tr|A2X3G0|A2X3G0_ORYSI Putative uncharacterized protein OS=Oryza... 85 4e-15 tr|A7PCE6|A7PCE6_VITVI Chromosome chr2 scaffold_11, whole genome... 81 6e-14 tr|B6UD52|B6UD52_MAIZE TOM2B OS=Zea mays PE=2 SV=1 77 1e-12 tr|B6TGV7|B6TGV7_MAIZE TOM2B OS=Zea mays PE=2 SV=1 77 1e-12 tr|B6SX44|B6SX44_MAIZE TOM2B OS=Zea mays PE=2 SV=1 76 2e-12 tr|Q9LQM1|Q9LQM1_ARATH F5D14.14 protein OS=Arabidopsis thaliana ... 72 4e-11 tr|Q8L9F1|Q8L9F1_ARATH Putative uncharacterized protein OS=Arabi... 72 4e-11 tr|Q8H960|Q8H960_ARATH Tobamovirus multiplication 2B (At1g32370)... 72 4e-11 tr|Q682B7|Q682B7_ARATH Putative uncharacterized protein At1g3237... 72 4e-11 tr|Q2V4J7|Q2V4J7_ARATH Uncharacterized protein At1g32370.3 OS=Ar... 72 4e-11 tr|A5APS0|A5APS0_VITVI Putative uncharacterized protein OS=Vitis... 36 2.2 tr|B7ANT4|B7ANT4_9BACE Putative uncharacterized protein OS=Bacte... 35 5.0 tr|Q9BIF4|Q9BIF4_CAEEL EHS-1 OS=Caenorhabditis elegans GN=ehs-1 ... 35 5.0 tr|Q8IFX4|Q8IFX4_CAEEL Eps15 (Endocytosis protein) homologous se... 35 5.0 tr|Q23418|Q23418_CAEEL Eps15 (Endocytosis protein) homologous se... 35 5.0 tr|Q7RJV4|Q7RJV4_PLAYO Putative uncharacterized protein PY03152 ... 34 6.5 tr|B2Q1S8|B2Q1S8_PROST Putative uncharacterized protein OS=Provi... 34 8.4
>tr|Q6ET30|Q6ET30_ORYSJ Putative tobamovirus multiplication protein 2B (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0444A09.25 PE=4 SV=1 Length = 130
Score = 84.7 bits (208), Expect = 4e-15 Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%) Frame = +2
Query: 113 GTTAKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPG 289 G A VA++++Q+V S NL +L+ +SP QA+ AKLPK+LLAKAS KN G +L Q+P Sbjct: 13 GAQAAVAEQIAQAVQSTSNLLQLMEESSPAQAHLAKLPKKLLAKASLAKNTGQVLHQLPS 72
Query: 290 VIAALDAHSDKSLVSFSELETILSLLNQQTNADKQS 397 VI++LDA+ D SL S S+++T+ LL+ N +S Sbjct: 73 VISSLDAYMDASLQSASQIKTVTQLLSNMENNQLRS 108
>tr|Q0E223|Q0E223_ORYSJ Os02g0279600 protein OS=Oryza sativa subsp. japonica GN=Os02g0279600 PE=4 SV=1 Length = 121
Score = 84.7 bits (208), Expect = 4e-15 Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%) Frame = +2
Query: 113 GTTAKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPG 289 G A VA++++Q+V S NL +L+ +SP QA+ AKLPK+LLAKAS KN G +L Q+P Sbjct: 13 GAQAAVAEQIAQAVQSTSNLLQLMEESSPAQAHLAKLPKKLLAKASLAKNTGQVLHQLPS 72
Query: 290 VIAALDAHSDKSLVSFSELETILSLLNQQTNADKQS 397 VI++LDA+ D SL S S+++T+ LL+ N +S Sbjct: 73 VISSLDAYMDASLQSASQIKTVTQLLSNMENNQLRS 108
>tr|A2X3G0|A2X3G0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06749 PE=4 SV=1 Length = 130
Score = 84.7 bits (208), Expect = 4e-15 Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%) Frame = +2
Query: 113 GTTAKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPG 289 G A VA++++Q+V S NL +L+ +SP QA+ AKLPK+LLAKAS KN G +L Q+P Sbjct: 13 GAQAAVAEQIAQAVQSTSNLLQLMEESSPAQAHLAKLPKKLLAKASLAKNTGQVLHQLPS 72
Query: 290 VIAALDAHSDKSLVSFSELETILSLLNQQTNADKQS 397 VI++LDA+ D SL S S+++T+ LL+ N +S Sbjct: 73 VISSLDAYMDASLQSASQIKTVTQLLSNMENNQLRS 108
>tr|A7PCE6|A7PCE6_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015831001 PE=4 SV=1 Length = 182
Score = 80.9 bits (198), Expect = 6e-14 Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 1/95 (1%) Frame = +2
Query: 122 AKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPGVIA 298 A +AD++SQSV S NL L++ +SP A KLPK LLAK S+IKN G LL+QMP VI+ Sbjct: 30 ATMADQISQSVQSTSNLLHLMQQSSPSHAQLTKLPKNLLAKTSTIKNTGQLLEQMPRVIS 89
Query: 299 ALDAHSDKSLVSFSELETILSLLNQQTNADKQSNP 403 +LDAH + L S L+T++ LL + Q NP Sbjct: 90 SLDAHIESGLQSVPHLKTVIQLLANMESC--QLNP 122
>tr|B6UD52|B6UD52_MAIZE TOM2B OS=Zea mays PE=2 SV=1 Length = 125
Score = 76.6 bits (187), Expect = 1e-12 Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 1/96 (1%) Frame = +2
Query: 113 GTTAKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPG 289 G A VA++++Q+V S NL +L+ +SP Q + AKLPK LL KAS KN +L Q+P Sbjct: 12 GANAAVAEQIAQAVRSTSNLLQLMEQSSPAQVHLAKLPKNLLEKASFAKNTDHVLHQLPQ 71
Query: 290 VIAALDAHSDKSLVSFSELETILSLLNQQTNADKQS 397 VI++LDA+ D+SL S S+++T+ LL+ +S Sbjct: 72 VISSLDAYLDRSLQSASQIKTVTQLLSNMEKTQLKS 107
>tr|B6TGV7|B6TGV7_MAIZE TOM2B OS=Zea mays PE=2 SV=1 Length = 128
Score = 76.6 bits (187), Expect = 1e-12 Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 1/96 (1%) Frame = +2
Query: 113 GTTAKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPG 289 G A VA++++Q+V S NL +L+ +SP Q + AKLPK LL KAS KN +L Q+P Sbjct: 12 GANAAVAEQIAQAVRSTSNLLQLMEQSSPAQVHLAKLPKNLLEKASFAKNTEHVLHQLPQ 71
Query: 290 VIAALDAHSDKSLVSFSELETILSLLNQQTNADKQS 397 VI++LDA+ D+SL S S+++T+ LL+ +S Sbjct: 72 VISSLDAYMDRSLQSASQIKTVTQLLSNMEKTQLKS 107
>tr|B6SX44|B6SX44_MAIZE TOM2B OS=Zea mays PE=2 SV=1 Length = 123
Score = 75.9 bits (185), Expect = 2e-12 Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 1/91 (1%) Frame = +2
Query: 113 GTTAKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPG 289 G A V ++++Q+V S NL +L+ +SP Q + AKLPK LL KAS KN +L Q+P Sbjct: 12 GAKAAVTEQIAQAVRSTSNLLQLMEQSSPAQVHLAKLPKNLLEKASFAKNTKHVLHQLPQ 71
Query: 290 VIAALDAHSDKSLVSFSELETILSLLNQQTN 382 VI++LDA+ D+SL S S+++T+ LL+ N Sbjct: 72 VISSLDAYMDRSLQSASQIKTVTQLLSNMEN 102
>tr|Q9LQM1|Q9LQM1_ARATH F5D14.14 protein OS=Arabidopsis thaliana GN=F5D14.14 PE=4 SV=1 Length = 536
Score = 71.6 bits (174), Expect = 4e-11 Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%) Frame = +2
Query: 122 AKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPGVIA 298 A VAD++SQ+V S NL L+R +S QA AKLPK LLAKAS K G L Q+P VI+ Sbjct: 20 AVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQALAQLPQVIS 79
Query: 299 ALDAHSDKSLVSFSELETILSLL----NQQTNADKQSN 400 +LDAH + L S L T+ LL + Q A +QSN Sbjct: 80 SLDAHIESGLHSGVHLNTVTQLLENMESTQLRALRQSN 117
>tr|Q8L9F1|Q8L9F1_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 131
Score = 71.6 bits (174), Expect = 4e-11 Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%) Frame = +2
Query: 122 AKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPGVIA 298 A VAD++SQ+V S NL L+R +S QA AKLPK LLAKAS K G L Q+P VI+ Sbjct: 20 AVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQALAQLPQVIS 79
Query: 299 ALDAHSDKSLVSFSELETILSLL----NQQTNADKQSN 400 +LDAH + L S L T+ LL + Q A +QSN Sbjct: 80 SLDAHIESGLHSGVHLNTVTQLLENMESTQLRALRQSN 117
>tr|Q8H960|Q8H960_ARATH Tobamovirus multiplication 2B (At1g32370) OS=Arabidopsis thaliana GN=TOM2B PE=2 SV=2 Length = 122
Score = 71.6 bits (174), Expect = 4e-11 Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%) Frame = +2
Query: 122 AKVADRLSQSVLSVHNLAELIRNTSPIQAN-AKLPKELLAKASSIKNIGVLLQQMPGVIA 298 A VAD++SQ+V S NL L+R +S QA AKLPK LLAKAS K G L Q+P VI+ Sbjct: 20 AVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQALAQLPQVIS 79
Query: 299 ALDAHSDKSLVSFSELETILSLL----NQQTNADKQSN 400 +LDAH + L S L T+ LL + Q A +QSN Sbjct: 80 SLDAHIESGLHSGVHLNTVTQLLENMESTQLRALRQSN 117
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