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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951155
Clone id TST38A01NGRL0010_K08
Library
Length 623
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_K08. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AGCAGACCAAAGTTTTGTATCTCTAGGGTTTTCTGCTTGCCATAAAAGTTCAAGACAAGC
TTGGCTACTTCCATGGCTGCCTCGACTTGCGATTCTCTCCTGCGCCTTCACTCATCTTCG
CTTGTATCCGACTCACATGATCTCAACCATGGCGGCAGAGGCAGCTTCCTTGGGGCAAGG
CTCTCCACAGATCTCATGGGTTCTACAGAGCTTGCAAGCAAAGGACAACATTCTGTTCGA
AGGAACTATGAAGTTTTTGCAGTTTCTTCTGCTCCCACTCCGTTGAGAAATACGACCTCA
ACAAAACGAACTCTCTTGAAGCGCCGCGATTCTTTGGAAAATGCATATGTGAATAGTCCT
ATGGTTTTATTAGTCTACCACACCTATGGATGTACTGGACTTGGAGAGAGGAGTGTGTAT
TCCATTTAGGAAGTACACACCAGAAGGGGTTCGGCAAAAGGTTTTAGATACACCAGGGGC
TTTTTTCTCTGTGGTCTCACGTGGTGCAGAGATTCTGTTGAAAATGGGTTATTATTGGGC
CAGCCTTTCTTATGACTGTCTTATTGGGAAAGGTGAAGAAATGGTGCCCTACAGGGCTGA
GCAGCTGAGGAACTTGCTGTGTG
■■Homology search results ■■ -
sp_hit_id Q8RWG1
Definition sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana
Align length 83
Score (bit) 113.0
E-value 9.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951155|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_K08, 5'
         (623 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing pro...   113   9e-25
sp|Q29527|C11B1_PAPHU Cytochrome P450 11B1, mitochondrial OS=Pap...    32   2.0  
sp|Q6XZ05|MRAZ_SPIKU Protein mraZ OS=Spiroplasma kunkelii GN=mra...    32   3.4  
sp|A3CTG3|EF1A_METMJ Elongation factor 1-alpha OS=Methanoculleus...    32   3.4  
sp|Q8N8Z3|CJ108_HUMAN Putative uncharacterized protein C10orf108...    31   4.5  
sp|Q6EVY7|YCF2_NYMAL Protein ycf2 OS=Nymphaea alba GN=ycf2-A PE=...    30   7.7  

>sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing
           protein kinase At4g31390, chloroplastic OS=Arabidopsis
           thaliana GN=At4g31390 PE=1 SV=1
          Length = 682

 Score =  113 bits (282), Expect = 9e-25
 Identities = 50/83 (60%), Positives = 69/83 (83%)
 Frame = +2

Query: 374 STTPMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSY 553
           S++ ++ LD+ERGVC+PFRKY+PE VR KVL++ GA  S+VSRG EI+  +G YW++L+Y
Sbjct: 93  SSSALEQLDIERGVCVPFRKYSPETVRSKVLESRGAVVSLVSRGVEIVWTLGLYWSTLTY 152

Query: 554 DCLIGKGEEMVPYRAEQLRNLLC 622
           D L+G+ EE+VP+RA QLRNLLC
Sbjct: 153 DFLVGRDEEVVPFRARQLRNLLC 175


>sp|Q29527|C11B1_PAPHU Cytochrome P450 11B1, mitochondrial OS=Papio
           hamadryas ursinus GN=CYP11B1 PE=3 SV=1
          Length = 503

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 227 CPLLASSVEPMRSVESLAPRKLPLPPWL 144
           C +L   VE ++ V+SL PR++ L PW+
Sbjct: 90  CVMLPEDVEKLQQVDSLNPRRMSLEPWV 117


>sp|Q6XZ05|MRAZ_SPIKU Protein mraZ OS=Spiroplasma kunkelii GN=mraZ
           PE=3 SV=1
          Length = 143

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = +2

Query: 5   DQSFVSLGFSACHKSSRQAWLLPWLPRLAILSCAFTHLRLYPTHMISTMAAEAASLGQGS 184
           D+ F+SLGF  C     +A  L W  ++A    A    R   T  I +M+ E      G 
Sbjct: 30  DKVFISLGFDGCVDVRNEAEWLKWTEKVASTGQATAEGRAL-TRKIMSMSDETTFDNAGR 88

Query: 185 PQISWVLQS 211
            +IS +LQ+
Sbjct: 89  IKISSILQN 97


>sp|A3CTG3|EF1A_METMJ Elongation factor 1-alpha OS=Methanoculleus
           marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf
           PE=3 SV=1
          Length = 425

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 128 PTHMISTMAAEAASLGQGSPQISWVLQSLQ 217
           P H+I +   EA S G+GS + +WV+ SL+
Sbjct: 35  PPHIIESFRKEAESKGKGSFEFAWVMDSLK 64


>sp|Q8N8Z3|CJ108_HUMAN Putative uncharacterized protein C10orf108
           OS=Homo sapiens GN=C10orf108 PE=2 SV=1
          Length = 221

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 24/70 (34%), Positives = 29/70 (41%)
 Frame = -1

Query: 596 PCRAPFLHLSQ*DSHKKGWPNNNPFSTESLHHVRPQRKKPLVYLKPFAEPLLVCTS*MEY 417
           PCR P LH S   S K G   +       L    P  +KPL  L P   P LV  +  + 
Sbjct: 118 PCRTPRLHSSGCFSSKAGTALSPSLPVPGLRPQPPFLQKPLSILAPATPPALVSPTPPK- 176

Query: 416 TLLSPSPVHP 387
             LSP  + P
Sbjct: 177 --LSPGQLSP 184


>sp|Q6EVY7|YCF2_NYMAL Protein ycf2 OS=Nymphaea alba GN=ycf2-A PE=3
            SV=1
          Length = 2253

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
 Frame = -2

Query: 613  VPQLLSPVGHHFFTFPNKTVIRKAGPIITHFQQNLCTT*D--HREKSPWCI*NLLPNPFW 440
            +P  L+  G  +  F          PI++   Q +    D  H     W I   L  P W
Sbjct: 1196 MPWFLTSAGCKYINFILLDTFSDPLPILSSSHQFVSFFYDIMHGSDISWSI---LQIPLW 1252

Query: 439  CVLPKWNTHSS----------LQVQYIHRCGRLIKP*DYSHMHFPKNR 326
             +LP+WN  S           L  + IHR      P  ++H+  P  R
Sbjct: 1253 AILPRWNLISEISSKCLQNILLPEEMIHRNNESPVPLKWTHLRSPNAR 1300
tr_hit_id A9T844
Definition tr|A9T844|A9T844_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 79
Score (bit) 127.0
E-value 4.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951155|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_K08, 5'
         (623 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T844|A9T844_PHYPA Predicted protein OS=Physcomitrella paten...   127   4e-28
tr|A7P4Z2|A7P4Z2_VITVI Chromosome chr4 scaffold_6, whole genome ...   117   6e-25
tr|Q2V3D3|Q2V3D3_ARATH Uncharacterized protein At4g31390.2 OS=Ar...   113   1e-23
tr|Q2R8U3|Q2R8U3_ORYSJ ABC1 family protein, expressed OS=Oryza s...   110   7e-23
tr|Q0ITU3|Q0ITU3_ORYSJ Os11g0216300 protein (Fragment) OS=Oryza ...   110   7e-23
tr|B8BJP9|B8BJP9_ORYSI Putative uncharacterized protein OS=Oryza...   110   7e-23
tr|A3C9R5|A3C9R5_ORYSJ Putative uncharacterized protein OS=Oryza...   102   2e-20
tr|A8HTY7|A8HTY7_CHLRE Ser/thr kinase, ABC1 family OS=Chlamydomo...    48   5e-04
tr|Q01FN3|Q01FN3_OSTTA Predicted unusual protein kinase (ISS) OS...    36   1.6  
tr|A4RRY7|A4RRY7_OSTLU Predicted protein OS=Ostreococcus lucimar...    36   2.1  
tr|Q2JU93|Q2JU93_SYNJA ABC1 domain protein OS=Synechococcus sp. ...    35   2.8  
tr|B3P879|B3P879_DROER GG11518 OS=Drosophila erecta GN=GG11518 P...    35   4.7  
tr|A0BZA1|A0BZA1_PARTE Chromosome undetermined scaffold_139, who...    34   6.2  
tr|Q8DID0|Q8DID0_THEEB Tlr1660 protein OS=Thermosynechococcus el...    34   8.0  
tr|B8HWD2|B8HWD2_9CHRO ABC-1 domain protein OS=Cyanothece sp. PC...    34   8.0  

>tr|A9T844|A9T844_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_141723 PE=4 SV=1
          Length = 596

 Score =  127 bits (320), Expect = 4e-28
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = +2

Query: 386 MDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYDCLI 565
           M+ L+LERGVC PFRKYTP+ VRQ+VL TPGA FSVV RG EI+ K+G+YWA+LSYDCL+
Sbjct: 12  MEELELERGVCNPFRKYTPDRVRQRVLGTPGALFSVVGRGVEIITKLGFYWANLSYDCLV 71

Query: 566 GKGEEMVPYRAEQLRNLLC 622
           G+GEEMVP RA QLR LLC
Sbjct: 72  GRGEEMVPKRAAQLRTLLC 90


>tr|A7P4Z2|A7P4Z2_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032339001
           PE=4 SV=1
          Length = 662

 Score =  117 bits (293), Expect = 6e-25
 Identities = 52/83 (62%), Positives = 66/83 (79%)
 Frame = +2

Query: 374 STTPMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSY 553
           S++ M+ LD+ERGVC PFRKYTPE VR KVL++ G   S+V RG EI+  +G YW++L Y
Sbjct: 65  SSSAMEQLDIERGVCFPFRKYTPETVRNKVLESRGQILSLVGRGVEIVWNLGLYWSTLMY 124

Query: 554 DCLIGKGEEMVPYRAEQLRNLLC 622
           DCL+G+ EE+VPYRA QLRNLLC
Sbjct: 125 DCLVGRDEEVVPYRARQLRNLLC 147


>tr|Q2V3D3|Q2V3D3_ARATH Uncharacterized protein At4g31390.2
           OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1
          Length = 657

 Score =  113 bits (282), Expect = 1e-23
 Identities = 50/83 (60%), Positives = 69/83 (83%)
 Frame = +2

Query: 374 STTPMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSY 553
           S++ ++ LD+ERGVC+PFRKY+PE VR KVL++ GA  S+VSRG EI+  +G YW++L+Y
Sbjct: 93  SSSALEQLDIERGVCVPFRKYSPETVRSKVLESRGAVVSLVSRGVEIVWTLGLYWSTLTY 152

Query: 554 DCLIGKGEEMVPYRAEQLRNLLC 622
           D L+G+ EE+VP+RA QLRNLLC
Sbjct: 153 DFLVGRDEEVVPFRARQLRNLLC 175


>tr|Q2R8U3|Q2R8U3_ORYSJ ABC1 family protein, expressed OS=Oryza
           sativa subsp. japonica GN=LOC_Os11g11000 PE=2 SV=1
          Length = 675

 Score =  110 bits (275), Expect = 7e-23
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = +2

Query: 377 TTPMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYD 556
           ++ ++ LD+ERGVCIPFRKYTPE VR +VL + G+  S+ SRG EI+ K+G YW++L YD
Sbjct: 77  SSALEQLDIERGVCIPFRKYTPEMVRNRVLGSRGSVLSLASRGVEIIWKLGLYWSALMYD 136

Query: 557 CLIGKGEEMVPYRAEQLRNLLC 622
            L+G+ EE+VP+RA QLRNLLC
Sbjct: 137 FLVGRDEEIVPFRARQLRNLLC 158


>tr|Q0ITU3|Q0ITU3_ORYSJ Os11g0216300 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os11g0216300 PE=4 SV=1
          Length = 734

 Score =  110 bits (275), Expect = 7e-23
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = +2

Query: 377 TTPMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYD 556
           ++ ++ LD+ERGVCIPFRKYTPE VR +VL + G+  S+ SRG EI+ K+G YW++L YD
Sbjct: 136 SSALEQLDIERGVCIPFRKYTPEMVRNRVLGSRGSVLSLASRGVEIIWKLGLYWSALMYD 195

Query: 557 CLIGKGEEMVPYRAEQLRNLLC 622
            L+G+ EE+VP+RA QLRNLLC
Sbjct: 196 FLVGRDEEIVPFRARQLRNLLC 217


>tr|B8BJP9|B8BJP9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35541 PE=4 SV=1
          Length = 709

 Score =  110 bits (275), Expect = 7e-23
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = +2

Query: 377 TTPMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYD 556
           ++ ++ LD+ERGVCIPFRKYTPE VR +VL + G+  S+ SRG EI+ K+G YW++L YD
Sbjct: 111 SSALEQLDIERGVCIPFRKYTPEMVRNRVLGSRGSVLSLASRGVEIIWKLGLYWSALMYD 170

Query: 557 CLIGKGEEMVPYRAEQLRNLLC 622
            L+G+ EE+VP+RA QLRNLLC
Sbjct: 171 FLVGRDEEIVPFRARQLRNLLC 192


>tr|A3C9R5|A3C9R5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_032037 PE=4 SV=1
          Length = 708

 Score =  102 bits (254), Expect = 2e-20
 Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 11/93 (11%)
 Frame = +2

Query: 377 TTPMDVLDLERGVCIPFRKYTPE-----------GVRQKVLDTPGAFFSVVSRGAEILLK 523
           ++ ++ LD+ERGVCIPFRKYTPE            VR +VL + G+  S+ SRG EI+ K
Sbjct: 129 SSALEQLDIERGVCIPFRKYTPEMVLNTSNGYIYRVRNRVLGSRGSVLSLASRGVEIIWK 188

Query: 524 MGYYWASLSYDCLIGKGEEMVPYRAEQLRNLLC 622
           +G YW++L YD L+G+ EE+VP+RA QLRNLLC
Sbjct: 189 LGLYWSALMYDFLVGRDEEIVPFRARQLRNLLC 221


>tr|A8HTY7|A8HTY7_CHLRE Ser/thr kinase, ABC1 family OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_113847 PE=4 SV=1
          Length = 596

 Score = 47.8 bits (112), Expect = 5e-04
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = +2

Query: 395 LDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYDCLIGKG 574
           L++E+ +C    KY+P+ V+ +VL  PG    V  R AEI  ++ ++ A+L  D L+G  
Sbjct: 16  LEMEKDICNIISKYSPDYVKSRVLRGPGDAALVALRIAEITARVSWFTATLYADRLMGHE 75

Query: 575 E--EMVPYRAEQLRNLL 619
           +  E V  RA +LR LL
Sbjct: 76  DTPERVRLRAAELRELL 92


>tr|Q01FN3|Q01FN3_OSTTA Predicted unusual protein kinase (ISS)
            OS=Ostreococcus tauri GN=Ot01g05460 PE=4 SV=1
          Length = 1592

 Score = 36.2 bits (82), Expect = 1.6
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = +2

Query: 386  MDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYDCLI 565
            ++ L ++ G C    KY+P  +R++ L  P        R AEIL+    + + L+ D   
Sbjct: 1025 VEELAMQSGACAIAPKYSPGEIRRRALRDPLEATKTALRCAEILMNAATFTSGLALDAFY 1084

Query: 566  GKGEEMVPYRAEQLR 610
               +E V  R+EQLR
Sbjct: 1085 --EQEKVVSRSEQLR 1097


>tr|A4RRY7|A4RRY7_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_86278 PE=4 SV=1
          Length = 620

 Score = 35.8 bits (81), Expect = 2.1
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = +2

Query: 404 ERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYDCLIGKGEEM 583
           + G C    KY+P  VR++ +  PG      +R  EI+     + + L YD L     E 
Sbjct: 59  QNGACAIAPKYSPAVVRERAMRGPGEAARTAARCGEIVFNATAFASGLLYDKL--NETER 116

Query: 584 VPYRAEQLR 610
           V  R+EQLR
Sbjct: 117 VVSRSEQLR 125