DK951160
Clone id TST38A01NGRL0010_K13
Library
Length 552
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_K13. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GATCCTGTTTGGGTCATGAATGTGGTGTCATCATATGCTGCAAATTCTTTAGGGGCAGTG
TTCGACCGAGGATTGATTGGCACAGTTAGCGACTGGTGCGAAGCCTTTTCTACTTATCCC
AGAACTTATGATCTGCTGCATGTGGAGGGCCTGTTTACAGCAGAGAGTCACAGGTGTGAG
ATGAAGGTGGTGCTGCTTGAAATGGACCGTATCTTAAGACCAGAGGGTTATGTCATTTTG
CGTGACGCAGCCAATTTCGTCGACAATGCTCAAGCGATTGGAGAAGCCATGCGATGGAAG
TGCCAGAAGTATGAAGTTGAGAAGCCTTTAACAGATAGTGAACAGTTATTGCTCTGCCAA
AAGATTTTTTGGAGGTCACCTGAGGATCAATTGCAGGAACCGTGAGGAGATTGTTTTTCT
ATTTTAGCAATCTGGAAAAGTTGCAGAGTAGATATGCTCAACTGTTTTTGGGCTGGCTTA
TCAATTAATGTCATGCGGCGAATATTACCTTAGCTCCACTTGATATTAGATGTCATACAA
TGAAGGAGCAGA
■■Homology search results ■■ -
sp_hit_id Q5TYW1
Definition sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens
Align length 93
Score (bit) 32.7
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951160|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_K13, 5'
(552 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens GN... 33 1.2
sp|A6NF34|ANTRL_HUMAN Anthrax toxin receptor-like OS=Homo sapien... 32 1.6
sp|P04275|VWF_HUMAN von Willebrand factor OS=Homo sapiens GN=VWF... 31 4.6
sp|P46358|RFAY_XANCP Probable RNA polymerase sigma factor rfaY O... 31 4.6
sp|Q4R7B7|ANTRL_MACFA Anthrax toxin receptor-like OS=Macaca fasc... 30 6.0

>sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens
GN=ZNF658 PE=2 SV=2
Length = 1059

Score = 32.7 bits (73), Expect = 1.2
Identities = 18/93 (19%), Positives = 45/93 (48%)
Frame = +1

Query: 115 YPRTYDLLHVEGLFTAESHRCEMKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMR 294
YP + + H++G+ + ++ + + D+ L EG +L N ++ A + E +
Sbjct: 78 YPGYFKVDHIKGIREKQEKPLWQEIFISDADKTLSKEGQKVLEKPFN-LEIAPELSEKIS 136

Query: 295 WKCQKYEVEKPLTDSEQLLLCQKIFWRSPEDQL 393
KC + + P+ + QL++ ++ + R + +
Sbjct: 137 CKCDSHRMNLPV--ASQLIISERKYSRKKTEYM 167


>sp|A6NF34|ANTRL_HUMAN Anthrax toxin receptor-like OS=Homo sapiens
GN=ANTXRL PE=2 SV=2
Length = 565

Score = 32.3 bits (72), Expect = 1.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2

Query: 104 PFLLIPELMICCMWRACLQQRV 169
P LL+ L++CC+WR C +Q V
Sbjct: 359 PLLLLVPLLLCCVWRLCRKQTV 380


>sp|P04275|VWF_HUMAN von Willebrand factor OS=Homo sapiens GN=VWF
PE=1 SV=2
Length = 2813

Score = 30.8 bits (68), Expect = 4.6
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2

Query: 407 PHGSCN*SSGDLQKIFWQSNNCSLSVKGFSTSYFWHFHRMASP 279
P SCN SSG++QK W+ C L STS F H + P
Sbjct: 206 PSSSCNISSGEMQKGLWE--QCQLLK---STSVFARCHPLVDP 243


>sp|P46358|RFAY_XANCP Probable RNA polymerase sigma factor rfaY
OS=Xanthomonas campestris pv. campestris GN=rfaY PE=3
SV=2
Length = 400

Score = 30.8 bits (68), Expect = 4.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -3

Query: 403 TVPAIDPQVTSKKSFGRAITVHYLLKA----SQLHTSGTSIAWLLQSLEHCRRNWLRHAK 236
TV AI +T + I L+A +QLH + + WL Q + R+WLR +
Sbjct: 35 TVTAIALAITRDVAASEDIAQEAFLRAWQRLAQLHQPASFLPWLRQITRNLARDWLRSHR 94

Query: 235 *HNPL 221
H PL
Sbjct: 95 -HRPL 98


>sp|Q4R7B7|ANTRL_MACFA Anthrax toxin receptor-like OS=Macaca
fascicularis GN=ANTXRL PE=2 SV=1
Length = 557

Score = 30.4 bits (67), Expect = 6.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2

Query: 104 PFLLIPELMICCMWRACLQQRV 169
P LL+P L++CC+WR C ++ V
Sbjct: 358 PLLLLP-LLLCCLWRLCRKKTV 378


tr_hit_id A9S2J8
Definition tr|A9S2J8|A9S2J8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 126
Score (bit) 196.0
E-value 7.0e-49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951160|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_K13, 5'
(552 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S2J8|A9S2J8_PHYPA Predicted protein OS=Physcomitrella paten... 196 7e-49
tr|A3AR68|A3AR68_ORYSJ Putative uncharacterized protein OS=Oryza... 188 2e-46
tr|A2XQK0|A2XQK0_ORYSI Putative uncharacterized protein OS=Oryza... 187 2e-46
tr|Q7XX36|Q7XX36_ORYSJ Os04g0218400 protein OS=Oryza sativa subs... 186 7e-46
tr|B2CBZ1|B2CBZ1_PINEL Early response to drought 3 (Fragment) OS... 186 9e-46
tr|A7LHN1|A7LHN1_PINPS Early response to drought 3 (Fragment) OS... 184 2e-45
tr|A7QQ45|A7QQ45_VITVI Chromosome chr2 scaffold_140, whole genom... 184 3e-45
tr|Q5EKH8|Q5EKH8_PINTA Early response to drought 3 (Fragment) OS... 184 4e-45
tr|B2CBZ2|B2CBZ2_PINEL Early response to drought 3 (Fragment) OS... 184 4e-45
tr|B2CBY9|B2CBY9_PINRA Early response to drought 3 (Fragment) OS... 184 4e-45
tr|Q5EKF4|Q5EKF4_PINTA Early response to drought 3 (Fragment) OS... 183 5e-45
tr|A9PF07|A9PF07_POPTR Putative uncharacterized protein OS=Popul... 183 6e-45
tr|Q5EKG3|Q5EKG3_PINTA Early response to drought 3 (Fragment) OS... 182 1e-44
tr|B8A0D9|B8A0D9_MAIZE Putative uncharacterized protein OS=Zea m... 182 1e-44
tr|B6UBQ9|B6UBQ9_MAIZE Ankyrin protein kinase-like OS=Zea mays P... 182 1e-44
tr|Q9C6S7|Q9C6S7_ARATH Putative uncharacterized protein F5M6.14 ... 178 1e-43
tr|Q8H7B2|Q8H7B2_ARATH Putative uncharacterized protein OS=Arabi... 178 1e-43
tr|Q94II3|Q94II3_ARATH ERD3 protein OS=Arabidopsis thaliana GN=E... 178 2e-43
tr|A9SWV7|A9SWV7_PHYPA Predicted protein OS=Physcomitrella paten... 177 3e-43
tr|O49670|O49670_ARATH Putative uncharacterized protein T18B16.9... 161 2e-38
tr|B7FLC4|B7FLC4_MEDTR Putative uncharacterized protein OS=Medic... 146 8e-34
tr|Q8H636|Q8H636_ORYSJ Os06g0128100 protein OS=Oryza sativa subs... 137 4e-31
tr|A9S2L0|A9S2L0_PHYPA Predicted protein OS=Physcomitrella paten... 137 4e-31
tr|A3B7Z4|A3B7Z4_ORYSJ Putative uncharacterized protein OS=Oryza... 137 4e-31
tr|A2Y8T3|A2Y8T3_ORYSI Putative uncharacterized protein OS=Oryza... 137 4e-31
tr|Q9SZX8|Q9SZX8_ARATH Putative uncharacterized protein AT4g1044... 137 5e-31
tr|A9NXM2|A9NXM2_PICSI Putative uncharacterized protein OS=Picea... 136 7e-31
tr|Q9LP29|Q9LP29_ARATH T9L6.6 protein OS=Arabidopsis thaliana GN... 136 9e-31
tr|Q9C884|Q9C884_ARATH Putative uncharacterized protein T16O9.7 ... 136 9e-31
tr|Q8L8Z6|Q8L8Z6_ARATH Putative uncharacterized protein OS=Arabi... 136 9e-31

>tr|A9S2J8|A9S2J8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_162466 PE=4 SV=1
Length = 600

Score = 196 bits (498), Expect = 7e-49
Identities = 91/126 (72%), Positives = 104/126 (82%)
Frame = +1

Query: 7 VWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCEMK 186
VWVMNVVSSY+AN+LG V+DRGLIG V DWCEAFSTYPRTYD +HV GLFTAESHRCEMK
Sbjct: 471 VWVMNVVSSYSANTLGIVYDRGLIGAVHDWCEAFSTYPRTYDWIHVAGLFTAESHRCEMK 530

Query: 187 VVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQKI 366
VLLE+DRILRPEG V+LRDA NF +NA+ +GEAMRWKC ++ E D+E LL C+K
Sbjct: 531 DVLLEIDRILRPEGIVVLRDALNFRENAKVLGEAMRWKCSSHDTEVGPADTEGLLFCKKT 590

Query: 367 FWRSPE 384
FW S E
Sbjct: 591 FWESSE 596


>tr|A3AR68|A3AR68_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_013290 PE=4 SV=1
Length = 565

Score = 188 bits (477), Expect = 2e-46
Identities = 88/130 (67%), Positives = 100/130 (76%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DPVWVMNVVSSY NSLG VFDRGLIGT DWCEAFSTYPRTYDLLH++GLFTAESHRCE
Sbjct: 436 DPVWVMNVVSSYGPNSLGVVFDRGLIGTNHDWCEAFSTYPRTYDLLHLDGLFTAESHRCE 495

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GY I+R+ A F+D+ I + MRW C K++ E D E++L+CQ
Sbjct: 496 MKFVLLEMDRILRPTGYAIIRENAYFLDSVATIAKGMRWNCDKHDTEHK-ADKEKVLICQ 554

Query: 361 KIFWRSPEDQ 390
K W Q
Sbjct: 555 KKLWSGKNTQ 564


>tr|A2XQK0|A2XQK0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14912 PE=4 SV=1
Length = 610

Score = 187 bits (476), Expect = 2e-46
Identities = 88/130 (67%), Positives = 100/130 (76%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DPVWVMNVVSSY NSLG VFDRGLIGT DWCEAFSTYPRTYDLLH++GLFTAESHRCE
Sbjct: 481 DPVWVMNVVSSYGPNSLGVVFDRGLIGTNHDWCEAFSTYPRTYDLLHLDGLFTAESHRCE 540

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GY I+R+ A F+D+ I + MRW C K++ E D E++L+CQ
Sbjct: 541 MKFVLLEMDRILRPTGYAIIRENAYFLDSVATIAKGMRWNCDKHDTEYK-ADKEKVLICQ 599

Query: 361 KIFWRSPEDQ 390
K W Q
Sbjct: 600 KKLWSGKNTQ 609


>tr|Q7XX36|Q7XX36_ORYSJ Os04g0218400 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0060B20.12 PE=4 SV=1
Length = 280

Score = 186 bits (472), Expect = 7e-46
Identities = 88/130 (67%), Positives = 100/130 (76%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DPVWVMNVVSSY NSLG VFDRGLIGT DWCEAFSTYPRTYDLLH++GLFTAESHRCE
Sbjct: 151 DPVWVMNVVSSYGPNSLGVVFDRGLIGTNHDWCEAFSTYPRTYDLLHLDGLFTAESHRCE 210

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GY I+R+ A F+D+ I + MRW C K++ E D E++L+CQ
Sbjct: 211 MKFVLLEMDRILRPTGYAIIRENAYFLDSVAIIVKGMRWNCDKHDTEYK-ADKEKVLICQ 269

Query: 361 KIFWRSPEDQ 390
K W Q
Sbjct: 270 KKLWSGKNTQ 279


>tr|B2CBZ1|B2CBZ1_PINEL Early response to drought 3 (Fragment)
OS=Pinus elliottii GN=erd3 PE=4 SV=1
Length = 207

Score = 186 bits (471), Expect = 9e-46
Identities = 84/126 (66%), Positives = 101/126 (80%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DP+WVMNVVSSY NSL V+DRGLIGT +DWCEAFSTYPRTYDLLHV+GLF+AESHRCE
Sbjct: 76 DPLWVMNVVSSYGLNSLNVVYDRGLIGTYNDWCEAFSTYPRTYDLLHVDGLFSAESHRCE 135

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GYVI+R++ +FVD+ + + MRW C + + E ++LL+CQ
Sbjct: 136 MKYVLLEMDRILRPAGYVIMRESPHFVDSVKNLATGMRWNCHQRDTEDAKNGDQKLLICQ 195

Query: 361 KIFWRS 378
K WRS
Sbjct: 196 KKDWRS 201


>tr|A7LHN1|A7LHN1_PINPS Early response to drought 3 (Fragment)
OS=Pinus pinaster GN=erd3 PE=4 SV=1
Length = 183

Score = 184 bits (468), Expect = 2e-45
Identities = 84/126 (66%), Positives = 101/126 (80%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DP+WVMNVVSSY NSL V+DRGLIGT +DWCEAFSTYPRTYDLLHV+GLF+AESHRCE
Sbjct: 52 DPLWVMNVVSSYGLNSLNVVYDRGLIGTYNDWCEAFSTYPRTYDLLHVDGLFSAESHRCE 111

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GYVI+R++ +FV++ + + MRW C + + E E+LL+CQ
Sbjct: 112 MKYVLLEMDRILRPAGYVIMRESPHFVNSVKNLATGMRWNCHQRDTEDANNGDEKLLICQ 171

Query: 361 KIFWRS 378
K WRS
Sbjct: 172 KKDWRS 177


>tr|A7QQ45|A7QQ45_VITVI Chromosome chr2 scaffold_140, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00003202001
PE=4 SV=1
Length = 600

Score = 184 bits (467), Expect = 3e-45
Identities = 86/126 (68%), Positives = 102/126 (80%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DP+WVMNVVSSYAAN+L VFDRGLIGT DWCEAFSTYPRTYDLLH++GLFTAESHRC+
Sbjct: 470 DPLWVMNVVSSYAANTLPVVFDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHRCD 529

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GY I+R+++ FVD I + MRW C+K E E + + E++L+CQ
Sbjct: 530 MKYVLLEMDRILRPNGYAIIRESSYFVDAVATIAKGMRWGCRKEETEYGI-EKEKILICQ 588

Query: 361 KIFWRS 378
K W S
Sbjct: 589 KKIWYS 594


>tr|Q5EKH8|Q5EKH8_PINTA Early response to drought 3 (Fragment)
OS=Pinus taeda GN=erd3 PE=4 SV=1
Length = 207

Score = 184 bits (466), Expect = 4e-45
Identities = 83/126 (65%), Positives = 101/126 (80%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DP+WVMNVVSSY NSL V+DRGLIGT +DWCEAFSTYPRTYDLLHV+GLF+AESHRCE
Sbjct: 76 DPLWVMNVVSSYGLNSLNVVYDRGLIGTYNDWCEAFSTYPRTYDLLHVDGLFSAESHRCE 135

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GYVI+R++ +FV++ + + MRW C + + E ++LL+CQ
Sbjct: 136 MKYVLLEMDRILRPAGYVIMRESPHFVNSVKNLATGMRWNCHQRDTEDAKNGDQKLLICQ 195

Query: 361 KIFWRS 378
K WRS
Sbjct: 196 KKDWRS 201


>tr|B2CBZ2|B2CBZ2_PINEL Early response to drought 3 (Fragment)
OS=Pinus elliottii GN=erd3 PE=4 SV=1
Length = 207

Score = 184 bits (466), Expect = 4e-45
Identities = 83/126 (65%), Positives = 101/126 (80%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DP+WVMNVVSSY NSL V+DRGLIGT +DWCEAFSTYPRTYDLLHV+GLF+AESHRCE
Sbjct: 76 DPLWVMNVVSSYGLNSLNVVYDRGLIGTYNDWCEAFSTYPRTYDLLHVDGLFSAESHRCE 135

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GYVI+R++ +FV++ + + MRW C + + E ++LL+CQ
Sbjct: 136 MKYVLLEMDRILRPAGYVIMRESPHFVNSVKNLATGMRWNCHQRDTEDAKNGDQKLLICQ 195

Query: 361 KIFWRS 378
K WRS
Sbjct: 196 KKDWRS 201


>tr|B2CBY9|B2CBY9_PINRA Early response to drought 3 (Fragment)
OS=Pinus radiata GN=erd3 PE=4 SV=1
Length = 207

Score = 184 bits (466), Expect = 4e-45
Identities = 83/126 (65%), Positives = 101/126 (80%)
Frame = +1

Query: 1 DPVWVMNVVSSYAANSLGAVFDRGLIGTVSDWCEAFSTYPRTYDLLHVEGLFTAESHRCE 180
DP+WVMNVVSSY NSL V+DRGLIGT +DWCEAFSTYPRTYDLLHV+GLF+AESHRCE
Sbjct: 76 DPLWVMNVVSSYGLNSLNVVYDRGLIGTYNDWCEAFSTYPRTYDLLHVDGLFSAESHRCE 135

Query: 181 MKVVLLEMDRILRPEGYVILRDAANFVDNAQAIGEAMRWKCQKYEVEKPLTDSEQLLLCQ 360
MK VLLEMDRILRP GYVI+R++ +FV++ + + MRW C + + E ++LL+CQ
Sbjct: 136 MKYVLLEMDRILRPAGYVIMRESPHFVNSVKNLATGMRWNCHQRDTEDAKNGDQKLLICQ 195

Query: 361 KIFWRS 378
K WRS
Sbjct: 196 KKDWRS 201