DK951170 |
Clone id |
TST38A01NGRL0010_K23 |
Library |
TST38 |
Length |
688 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_K23. 5' end sequence. |
Accession |
DK951170 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GAACACCCTCCTTCTTTCTTCCTCACAGCTTGCTCTCTCTGCAATTCCTATCAGTGCTTA CAGGAAAATGTCCAGAAAGGGCTCTCTGCAGGTTCAGGTCACAGTTCCCTCATTCTTCCT CTGCCCCATCTCCCTGGAGCTCATGCGCGACCCTGTCACCCTCAGCTCCGGCCAAACCTT CGACAGGTCCAGCATTCAGCAATGGCTCGATGACGGCCACCACACCTGCCCCGTCACCCG CCAGCCCATCCCTGACTCGGACCTCGAAGACCCCATCCCTAACCATGCCCTCCGCCGCAT GATCCAAGCCTGGTGCGTCCAGAACAAGAGCTGCGGTGTCGAGCGCATCCTCACCCCCCG CCAACCCCCTTCCCTCAGAGACATCCCCCACCTCCTCGACCTTCTCGCTCCCGCCCGCTC CTCTGCCTCGACCAATGCCCACGAGTCTCTGGATGCACTCCAGACATTGATCCGCATCGC CATCGAACGGCCCCACTCTCGACACACGATCCTCCTCTCTGGCACTCTCCCCTGCCTCAC GAAGCTCTTGTCCCGTTCCTACCCTGGCTTGGCCCCTCTTGCTGCTGCCAGCCCCACTCC CATGTCCTTTACCATTGCCGAAGAGGCCCTCAAGCTCCTTGACCTCTTGATTGATCCGGA GTTGTTTGCCGACTTCGATCAACAACAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FXA4 |
Definition |
sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana |
Align length |
148 |
Score (bit) |
123.0 |
E-value |
8.0e-28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SDB8 |
Definition |
tr|A9SDB8|A9SDB8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
165 |
Score (bit) |
142.0 |
E-value |
3.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951170|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_K23, 5' (688 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SDB8|A9SDB8_PHYPA Predicted protein OS=Physcomitrella paten... 142 3e-32 tr|A9TX73|A9TX73_PHYPA Predicted protein (Fragment) OS=Physcomit... 135 2e-30 tr|A9PAR6|A9PAR6_POPTR Putative uncharacterized protein OS=Popul... 132 2e-29 tr|A5B4U0|A5B4U0_VITVI Putative uncharacterized protein OS=Vitis... 127 7e-28 tr|A8IXJ0|A8IXJ0_BRACM U-box domain-containing protein OS=Brassi... 126 1e-27 tr|Q94G57|Q94G57_PETCR Immediate-early fungal elicitor protein C... 125 2e-27 tr|Q93VZ1|Q93VZ1_PETCR Immediate-early fungal elicitor protein C... 125 2e-27 tr|A7P9L6|A7P9L6_VITVI Chromosome chr3 scaffold_8, whole genome ... 125 3e-27 tr|B6UDD7|B6UDD7_MAIZE Immediate-early fungal elicitor protein C... 124 6e-27 tr|Q8S8Z6|Q8S8Z6_SOYBN Syringolide-induced protein 13-1-1 OS=Gly... 123 1e-26 tr|B6SVN8|B6SVN8_MAIZE Immediate-early fungal elicitor protein C... 122 2e-26 tr|B4G225|B4G225_MAIZE Putative uncharacterized protein OS=Zea m... 122 2e-26 tr|A9PHG0|A9PHG0_POPTR Putative uncharacterized protein OS=Popul... 122 3e-26 tr|Q7XTM1|Q7XTM1_ORYSJ Os04g0686000 protein OS=Oryza sativa subs... 121 5e-26 tr|Q654Q4|Q654Q4_ORYSJ Os06g0248500 protein OS=Oryza sativa subs... 120 8e-26 tr|A7QHS5|A7QHS5_VITVI Chromosome chr8 scaffold_99, whole genome... 120 8e-26 tr|A2YB97|A2YB97_ORYSI Putative uncharacterized protein OS=Oryza... 120 8e-26 tr|Q84QD5|Q84QD5_TOBAC Avr9/Cf-9 rapidly elicited protein 74 OS=... 120 1e-25 tr|Q2HVY1|Q2HVY1_MEDTR U box OS=Medicago truncatula GN=MtrDRAFT_... 120 1e-25 tr|Q259M5|Q259M5_ORYSA H0723C07.7 protein OS=Oryza sativa GN=H07... 120 1e-25 tr|B7FHN9|B7FHN9_MEDTR Putative uncharacterized protein (Fragmen... 120 1e-25 tr|B6SXP3|B6SXP3_MAIZE Ubiquitin-protein ligase OS=Zea mays PE=2... 120 1e-25 tr|A2XZ62|A2XZ62_ORYSI Putative uncharacterized protein OS=Oryza... 120 1e-25 tr|A9TBA4|A9TBA4_PHYPA Predicted protein OS=Physcomitrella paten... 119 2e-25 tr|A7P3Y9|A7P3Y9_VITVI Chromosome chr1 scaffold_5, whole genome ... 119 2e-25 tr|Q6YYF8|Q6YYF8_ORYSJ Putative immediate-early fungal elicitor ... 117 5e-25 tr|Q0E0I9|Q0E0I9_ORYSJ Os02g0548700 protein OS=Oryza sativa subs... 117 5e-25 tr|Q6Z5P5|Q6Z5P5_ORYSJ Os02g0738200 protein OS=Oryza sativa subs... 117 9e-25 tr|B7FA87|B7FA87_ORYSJ cDNA, clone: J100056J12, full insert sequ... 117 9e-25 tr|Q1WM08|Q1WM08_SOLLC Avr9/Cf-9 rapidly elicited protein OS=Sol... 116 2e-24
>tr|A9SDB8|A9SDB8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_127819 PE=4 SV=1 Length = 440
Score = 142 bits (357), Expect = 3e-32 Identities = 78/165 (47%), Positives = 101/165 (61%) Frame = +2
Query: 77 KGSLQVQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCPVTRQPIPD 256 K L QV VP+FFLCPISLELMRDPVTL +G TFDR+SI++WL GH+TCP T Q + Sbjct: 16 KLQLPHQVIVPAFFLCPISLELMRDPVTLCTGMTFDRASIERWLGLGHNTCPATNQILES 75
Query: 257 SDLEDPIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLLDLLAPARSSASTN 436 +L IPNH LRR+IQ WCV NK+ GVERI TP+ P D+ LL+ + Sbjct: 76 QEL---IPNHTLRRLIQNWCVANKAYGVERIPTPKAPAEPGDVKQLLEGIGQCE------ 126
Query: 437 AHESLDALQTLIRIAIERPHSRHTILLSGTLPCLTKLLSRSYPGL 571 D+L+ L +A E +R I G +P L K L++ + G+ Sbjct: 127 -EVGCDSLKNLWSLAKECERNRRCIEKVGAVPILAKALAQLWVGM 170
>tr|A9TX73|A9TX73_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_32641 PE=4 SV=1 Length = 388
Score = 135 bits (340), Expect = 2e-30 Identities = 73/154 (47%), Positives = 99/154 (64%) Frame = +2
Query: 95 QVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCPVTRQPIPDSDLEDP 274 QV VP+FFLCPISLELMRDPVTLS+G TFDRSSI++WL+ G++TCP T Q + + +L Sbjct: 2 QVVVPAFFLCPISLELMRDPVTLSTGMTFDRSSIERWLEFGNNTCPGTNQVLENQEL--- 58
Query: 275 IPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLLDLLAPARSSASTNAHESLD 454 IPNH LRR+IQ WCV NK+ GVERI TP+ P + LL + ++ + Sbjct: 59 IPNHTLRRLIQNWCVANKAYGVERIPTPKAPLQTEKVKQLLADIGQCETA-------GYN 111
Query: 455 ALQTLIRIAIERPHSRHTILLSGTLPCLTKLLSR 556 +L+ L +A E +R I G +P L + L++ Sbjct: 112 SLKKLWSLAKESERNRKCIEEIGAVPILAEALAQ 145
>tr|A9PAR6|A9PAR6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 132 bits (333), Expect = 2e-29 Identities = 72/142 (50%), Positives = 91/142 (64%) Frame = +2
Query: 86 LQVQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCPVTRQPIPDSDL 265 L + V +P F CPISLELM DPVT+S+GQT+DRSSI+ W+ G+ TCPVTR P+ D L Sbjct: 8 LDLTVQIPYHFRCPISLELMCDPVTVSTGQTYDRSSIESWVATGNTTCPVTRAPLTDFTL 67
Query: 266 EDPIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLLDLLAPARSSASTNAHE 445 IPNH LRR+IQ WCV N++ GVERI TP+QP P L+ L +SAS H Sbjct: 68 ---IPNHTLRRLIQDWCVANRAFGVERIPTPKQPAE----PSLVRSLLNQAASASNPTHS 120
Query: 446 SLDALQTLIRIAIERPHSRHTI 511 L AL+ L +A + +R I Sbjct: 121 RLSALRRLRGLARDSDKNRSVI 142
>tr|A5B4U0|A5B4U0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026443 PE=4 SV=1 Length = 476
Score = 127 bits (319), Expect = 7e-28 Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 3/153 (1%) Frame = +2
Query: 62 RKMSRKGSLQ---VQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCP 232 RK GSL+ V V +P F CPISLELM DPVT+S+GQT+DR+SI+ W+ G+ TCP Sbjct: 58 RKKKMPGSLEPLDVGVQIPYHFRCPISLELMCDPVTVSTGQTYDRASIEYWVGTGNTTCP 117
Query: 233 VTRQPIPDSDLEDPIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLLDLLAP 412 VTR + D L IPNH LRR+IQ WCV N+S GVERI TP+QP P + L Sbjct: 118 VTRSSLTDFTL---IPNHTLRRLIQDWCVANRSFGVERIPTPKQPAD----PASVRSLQT 170
Query: 413 ARSSASTNAHESLDALQTLIRIAIERPHSRHTI 511 SS S +H L A++ L +A + +R I Sbjct: 171 QVSSQSNPSHTRLSAVKRLRGLARDSDKNRSII 203
>tr|A8IXJ0|A8IXJ0_BRACM U-box domain-containing protein OS=Brassica campestris PE=2 SV=1 Length = 417
Score = 126 bits (316), Expect = 1e-27 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Frame = +2
Query: 86 LQVQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHH-TCPVTRQPIPDSD 262 L + + +P F CPISLELMRDPVT+ +GQT+DR+SI+ W+ G++ TCPVTR P+ D Sbjct: 8 LDLGIQIPYHFRCPISLELMRDPVTVCTGQTYDRTSIESWVSTGNNTTCPVTRAPLSDFT 67
Query: 263 LEDPIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLLDLLAPARSSASTNAH 442 L IPNH LRR+IQ WCV N+S GVERI TP+QP + LL A A S A +A Sbjct: 68 L---IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLS-QASATSGAHVSAR 123
Query: 443 ESLDALQTLIRIAIERPHSRHTILLSGTLPCLTKLL 550 AL+ L A + +R I L ++L Sbjct: 124 SRAAALRRLRGFARDSEKNRVLIAAHNAKEILIRIL 159
>tr|Q94G57|Q94G57_PETCR Immediate-early fungal elicitor protein CMPG1 (Fragment) OS=Petroselinum crispum GN=CMPG1 PE=4 SV=1 Length = 230
Score = 125 bits (315), Expect = 2e-27 Identities = 64/150 (42%), Positives = 99/150 (66%), Gaps = 1/150 (0%) Frame = +2
Query: 92 VQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCPVTRQPIPDSDLED 271 ++V++P+ F CPISL+LM+DPVTLS+G T+DR SI+ W++ G+ TCP+T+Q + S LE Sbjct: 26 MEVSIPNHFRCPISLDLMKDPVTLSTGITYDRHSIETWIEAGNKTCPITKQML--STLE- 82
Query: 272 PIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLLD-LLAPARSSASTNAHES 448 PIPNH +R+MIQ WCV N S G+ERI TPR P S + +L ++A R ++ E Sbjct: 83 PIPNHTIRKMIQDWCVDNSSYGIERIPTPRIPVSSHQVTEMLSKVVAACRREEASACREL 142
Query: 449 LDALQTLIRIAIERPHSRHTILLSGTLPCL 538 + ++ L++ E ++ + +GT+ L Sbjct: 143 VGKIKRLVK---ENERNKRCFVANGTVGVL 169
>tr|Q93VZ1|Q93VZ1_PETCR Immediate-early fungal elicitor protein CMPG1 OS=Petroselinum crispum GN=CMPG1 PE=2 SV=1 Length = 442
Score = 125 bits (315), Expect = 2e-27 Identities = 64/150 (42%), Positives = 99/150 (66%), Gaps = 1/150 (0%) Frame = +2
Query: 92 VQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCPVTRQPIPDSDLED 271 ++V++P+ F CPISL+LM+DPVTLS+G T+DR SI+ W++ G+ TCP+T+Q + S LE Sbjct: 26 MEVSIPNHFRCPISLDLMKDPVTLSTGITYDRHSIETWIEAGNKTCPITKQML--STLE- 82
Query: 272 PIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLLD-LLAPARSSASTNAHES 448 PIPNH +R+MIQ WCV N S G+ERI TPR P S + +L ++A R ++ E Sbjct: 83 PIPNHTIRKMIQDWCVDNSSYGIERIPTPRIPVSSHQVTEMLSKVVAACRREEASACQEL 142
Query: 449 LDALQTLIRIAIERPHSRHTILLSGTLPCL 538 + ++ L++ E ++ + +GT+ L Sbjct: 143 VGKIKRLVK---ENERNKRCFVANGTVGVL 169
>tr|A7P9L6|A7P9L6_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036615001 PE=4 SV=1 Length = 415
Score = 125 bits (314), Expect = 3e-27 Identities = 70/142 (49%), Positives = 89/142 (62%) Frame = +2
Query: 86 LQVQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCPVTRQPIPDSDL 265 L V V +P F CPISLELM DPVT+S+GQT+DR+SI+ W+ G+ TCPVTR + D L Sbjct: 8 LDVGVQIPYHFRCPISLELMCDPVTVSTGQTYDRASIEYWVGTGNTTCPVTRSSLTDFTL 67
Query: 266 EDPIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLLDLLAPARSSASTNAHE 445 IPNH LRR+IQ WCV N+S GVERI TP+QP P + L SS S +H Sbjct: 68 ---IPNHTLRRLIQDWCVANRSFGVERIPTPKQPAD----PASVRSLQTQVSSQSNPSHT 120
Query: 446 SLDALQTLIRIAIERPHSRHTI 511 L A++ L +A + +R I Sbjct: 121 RLSAVKRLRGLARDSDKNRSII 142
>tr|B6UDD7|B6UDD7_MAIZE Immediate-early fungal elicitor protein CMPG1 OS=Zea mays PE=2 SV=1 Length = 447
Score = 124 bits (311), Expect = 6e-27 Identities = 78/178 (43%), Positives = 105/178 (58%), Gaps = 2/178 (1%) Frame = +2
Query: 74 RKGSLQVQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCPVTRQPIP 253 R GS V++ +P+ F CPISL+LMRDPVT +G T+DR SI+ WLD G TCPVT P+ Sbjct: 22 RTGS--VELAIPAHFRCPISLDLMRDPVTAPAGITYDRESIEAWLDTGRATCPVTHAPLR 79
Query: 254 DSDLEDPIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDIPHLL-DLLAPA-RSSA 427 DL +PNHA+RR+IQ WCV N+S GVERI TP+ P + LL DL A R A Sbjct: 80 HEDL---VPNHAIRRVIQDWCVANRSRGVERIPTPKIPVTPVQASELLFDLAGSARRRDA 136
Query: 428 STNAHESLDALQTLIRIAIERPHSRHTILLSGTLPCLTKLLSRSYPGLAPLAAASPTP 601 + E + ++ L R + ER S + +G ++L+ +Y LA AA + P Sbjct: 137 AARCVEVVTKIKVLARDS-ERNRSCFASIGTG------RVLAAAYESLAAAAADAAAP 187
>tr|Q8S8Z6|Q8S8Z6_SOYBN Syringolide-induced protein 13-1-1 OS=Glycine max GN=13-1-1 PE=2 SV=1 Length = 431
Score = 123 bits (308), Expect = 1e-26 Identities = 57/108 (52%), Positives = 79/108 (73%) Frame = +2
Query: 62 RKMSRKGSLQVQVTVPSFFLCPISLELMRDPVTLSSGQTFDRSSIQQWLDDGHHTCPVTR 241 +K + L+V+V +P+ F CP+SLELM DPVTLS+G T+DR SI++W++ G+ TCPVT Sbjct: 15 KKEKSQTQLEVEVVIPNHFHCPVSLELMTDPVTLSTGITYDRVSIEKWIEGGNRTCPVTN 74
Query: 242 QPIPDSDLEDPIPNHALRRMIQAWCVQNKSCGVERILTPRQPPSLRDI 385 Q + D+ IPNHA+RRMIQ WCV+N S G++RI TPR P S ++ Sbjct: 75 QVLTTFDI---IPNHAIRRMIQDWCVENSSYGIDRIPTPRIPISAYEV 119
|