DK951175 [AcEST]

DK951175
Clone id	TST38A01NGRL0010_L04
Library	TST38
Length	695
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_L04. 5' end sequence.
Accession	DK951175
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	-
Sequence	CTCTTCTCTTCTCTCCAATGCACTGGTCTTCTTCTTCCACATAAGTACCACTTTTCCACA AGACTTGTACATGGGGATGCAGAAAAGGCTAGGCTAATTGAGGCTGCCTGCAGGTACGTG CTCTTATCAATGCTCTTTTATGGCAAACTTCAAAGAGAGAAGGGGGCGTGCAGACGGTGC TGTACTTGTGAGCAAGCGGGTCCATAGCCATATTGCAGCAGTATGCAGCTAGCTGCCAGC CAGCATATCTGATTAACGCGGACTCTCTCGTACTAAGGTTGGCTGTTAACTTCTTCATTT TGCGCCCTCAGTGCCTCGAAATACAGGACAGGAGGGAGTGAGAGAGAGAGAGAGAGAATA TTGCCGCAAGGTGGCTGGCGTGGGCTAGTAACTGATTTGCCAATGCGCTGCACGTAAAAG AAATAAGGCTGCAGAATTCCAAGAATCGAACACACGACCAAAACAAGTTGGCTTTGGCCG CAACCAGAATTCCCCCTCACGCACTCAGATTCTCTCTCTCCGCTCTTGTCAGTGTGAGTT CACACCTCTTCTCTCTCTCTCTCTCGCTCTCTCTCTCTCATACTACAAGGAATCTCTCTC CTCATTCTCTCTCTGTCTCTCTCGGACCCTTTTGATTTGGAGTCTTGGCGAATTAAGCTG CAACAGGTGCGCGAGAGATGCCTTCCATCCAATGA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	A7XYJ6
Definition	sp\|A7XYJ6\|SOBPB_DANRE Sine oculis-binding protein homolog OS=Danio rerio
Align length	62
Score (bit)	31.6
E-value	4.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK951175\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_L04, 5' (695 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|A7XYJ6\|SOBPB_DANRE Sine oculis-binding protein homolog OS=Dan... 32 4.2 sp\|Q8BHH1\|AQP11_MOUSE Aquaporin-11 OS=Mus musculus GN=Aqp11 PE=2... 31 7.2 >sp\|A7XYJ6\|SOBPB_DANRE Sine oculis-binding protein homolog OS=Danio rerio GN=sobpb PE=2 SV=1 Length = 668 Score = 31.6 bits (70), Expect = 4.2 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%) Frame = -1 Query: 197 ACSQVQHRLHAPFSLSLPKSIDKSTYLQAASISLAFSA-------SPCTSLVEKWYLC 39 A + + R+ +P SL SL +ST +QAAS SL S+ S C + E YLC Sbjct: 514 ASASLDGRIVSPASLYSLA-----RSTAIQAASFSLDSSSGQIPSPLSDCEDVKENSYLC 568 Query: 38 GR 33 GR Sbjct: 569 GR 570 >sp\|Q8BHH1\|AQP11_MOUSE Aquaporin-11 OS=Mus musculus GN=Aqp11 PE=2 SV=1 Length = 271 Score = 30.8 bits (68), Expect = 7.2 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = +1 Query: 43 KYHFSTRL------VHGDAEKARLIEAACRYVLLSMLFYGKLQREK 162 KYH+ R+ +H D KA +IEA C ++ S L + + R K Sbjct: 145 KYHYDERILACRNPIHTDMSKAIIIEAICSFIFHSALLHFQEVRTK 190
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK951175\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_L04, 5' (695 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****