| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951178|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_L07, 5'
(602 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 192 1e-48
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 186 1e-46
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 179 1e-44
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 177 5e-44
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 177 5e-44
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 169 1e-41
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 168 2e-41
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 167 5e-41
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 164 3e-40
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 149 8e-36
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 146 7e-35
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 108 2e-23
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 99 1e-20
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 95 2e-19
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 95 3e-19
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05... 94 4e-19
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 92 2e-18
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ... 92 3e-18
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 92 3e-18
sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic ... 91 4e-18
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 91 6e-18
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15... 90 8e-18
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 90 8e-18
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ... 90 1e-17
sp|Q60900|ELAV3_MOUSE ELAV-like protein 3 OS=Mus musculus GN=Ela... 90 1e-17
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ... 89 1e-17
sp|Q14576|ELAV3_HUMAN ELAV-like protein 3 OS=Homo sapiens GN=ELA... 89 1e-17
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 88 3e-17
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ... 87 6e-17
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ... 87 6e-17
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 233
Score = 192 bits (488), Expect = 1e-48
Identities = 102/190 (53%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Frame = +2
Query: 35 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 208
+ G F E AKL+VGNLP+ +SE+LAG+F G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43 EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102
Query: 209 MSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPFLDPPPSNKLFVGNMEGG 388
MS+VE+ A+E L+G D GR L VN PR F PS +++VGN+
Sbjct: 103 MSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDF---EPSCRVYVGNLPWD 159
Query: 389 VDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRN 568
VD L LFSEHGKV+ ARVV+DRETGRSRGFGFVTMS+E+EVN A+ +DG ++GR
Sbjct: 160 VDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRA 219
Query: 569 LRVNMAGERP 598
+RVN+A ERP
Sbjct: 220 VRVNVAEERP 229
Score = 78.6 bits (192), Expect = 2e-14
Identities = 43/89 (48%), Positives = 54/89 (60%)
Frame = +2
Query: 335 FLDPPPSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEA 514
F +PP KLFVGN+ VD L +F G V A V+ +RET RSRGFGFVTMST
Sbjct: 48 FSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVE 107
Query: 515 EVNQALNKMDGAAIEGRNLRVNMAGERPS 601
E +A+ ++G ++GR L VN A R S
Sbjct: 108 EAEKAVELLNGYDMDGRQLTVNKAAPRGS 136
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 186 bits (471), Expect = 1e-46
Identities = 105/199 (52%), Positives = 139/199 (69%)
Frame = +2
Query: 2 GDSLDNGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 181
GD + S R P E AKL+VGNL + NS+ LA +F++ G+V++ EVIY++E+
Sbjct: 130 GDVSEGAVSERAEFPEPSEE-AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETD 188
Query: 182 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPFLDPPPSNK 361
+SRGFGFVTMSSV++ TA+EK + D GR L VN RG P RAP + P + +
Sbjct: 189 QSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGSRPE-RAPRVYEP-AFR 245
Query: 362 LFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKM 541
++VGN+ VD+G L LFSEHGKV+EARVV DRETGRSRGFGFVTMS E+N+A++ +
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 542 DGAAIEGRNLRVNMAGERP 598
DG +EGR +RVN+A ERP
Sbjct: 306 DGQNLEGRAIRVNVAEERP 324
Score = 72.4 bits (176), Expect = 2e-12
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Frame = +2
Query: 191 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPFLDPPP 352
G G V + E+ + + +G + G V+ + + GD A + RA F +P
Sbjct: 89 GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 148
Query: 353 SNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 532
KLFVGN+ V+ L LF + G V A V+ +RET +SRGFGFVTMS+ E A+
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208
Query: 533 NKMDGAAIEGRNLRVNMAGERPS 601
K + + GR L VN A R S
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGS 231
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 276
Score = 179 bits (454), Expect = 1e-44
Identities = 96/178 (53%), Positives = 128/178 (71%)
Frame = +2
Query: 65 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 244
AKL+VGNLP+ +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97 AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156
Query: 245 KLDGADYAGRTLRVNFPNRNRGDAPTPRAPFLDPPPSNKLFVGNMEGGVDDGMLHDLFSE 424
D GR L VN RG P RAP P + +++VGN+ +DD L +FSE
Sbjct: 157 LYSQYDLNGRLLTVN-KAAPRGSRPE-RAPRTFQP-TYRIYVGNIPWDIDDARLEQVFSE 213
Query: 425 HGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 598
HGKV+ ARVV DRE+GRSRGFGFVTMS+EAE+++A+ +DG ++GR +RVN A ERP
Sbjct: 214 HGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERP 271
Score = 83.6 bits (205), Expect = 7e-16
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Frame = +2
Query: 35 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 214
+ P + ++YVGN+PW + L VF + G V V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240
Query: 215 SVEDCNTAIEKLDGADYAGRTLRVNF----PNRN 304
S + + AI LDG GRT+RVN P RN
Sbjct: 241 SEAEMSEAIANLDGQTLDGRTIRVNAAEERPRRN 274
Score = 70.5 bits (171), Expect = 6e-12
Identities = 53/134 (39%), Positives = 70/134 (52%)
Frame = +2
Query: 200 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPFLDPPPSNKLFVGNM 379
FV++ S ED NT + LD + G +FP+ T + +P KLFVGN+
Sbjct: 55 FVSVLS-EDDNTLV--LDDQEQGG-----DFPSFVGEAGETEE--YQEPSEDAKLFVGNL 104
Query: 380 EGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIE 559
+D L LF + G V A V+ +RET RSRGFGFVTMST E ++A+ +
Sbjct: 105 PYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLN 164
Query: 560 GRNLRVNMAGERPS 601
GR L VN A R S
Sbjct: 165 GRLLTVNKAAPRGS 178
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 315
Score = 177 bits (448), Expect = 5e-44
Identities = 93/178 (52%), Positives = 129/178 (72%), Gaps = 1/178 (0%)
Frame = +2
Query: 65 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 244
AKL+VGNLP+ +SE LA +F++ G V++ EVIY++++ +SRGFGFVTMS+VE+ A+E
Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 195
Query: 245 KLDGADYAGRTLRVNFPNRNRGDAPT-PRAPFLDPPPSNKLFVGNMEGGVDDGMLHDLFS 421
+ D GR L VN R RG+ P P F S +++VGN+ G+DD L LFS
Sbjct: 196 MYNRYDVNGRLLTVNKAAR-RGERPERPPRTF---EQSYRIYVGNIPWGIDDARLEQLFS 251
Query: 422 EHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGER 595
EHGKV+ ARVV DRETGRSRGFGFVTM++EAE++ A+ +DG +++GR +RVN+A +R
Sbjct: 252 EHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR 309
Score = 81.6 bits (200), Expect = 3e-15
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +2
Query: 56 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 235
E ++YVGN+PW + L +F + G V V+YD+E+GRSRGFGFVTM+S + +
Sbjct: 227 EQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSD 286
Query: 236 AIEKLDGADYAGRTLRVN 289
AI LDG GRT+RVN
Sbjct: 287 AIANLDGQSLDGRTIRVN 304
Score = 73.2 bits (178), Expect = 1e-12
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = +2
Query: 311 DAPTPRAPFLDPPPSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 490
+A F +PP KLFVGN+ VD L LF + G V A V+ +R+T +SRGFG
Sbjct: 121 EADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFG 180
Query: 491 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMA---GERP 598
FVTMST E +A+ + + GR L VN A GERP
Sbjct: 181 FVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERP 219
>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
SV=1
Length = 289
Score = 177 bits (448), Expect = 5e-44
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 19/209 (9%)
Frame = +2
Query: 29 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 199
F D PP +S + KL+VGNLP++ +S +LA +F+ G+V+MVEVIYDK +GRSRGFG
Sbjct: 76 FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135
Query: 200 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNF----PNRNRGDAPTPRAPF---------- 337
FVTMSSV + A ++ +G + GR LRVN P R G + PR+ F
Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGG 195
Query: 338 --LDPPPSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTE 511
N+++VGN+ GVDD L LFSE GKV+EARV+ DR++GRS+GFGFVT +
Sbjct: 196 GGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSS 255
Query: 512 AEVNQALNKMDGAAIEGRNLRVNMAGERP 598
EV A+ +DGA ++GR +RV+ A RP
Sbjct: 256 QEVQNAIKSLDGADLDGRQIRVSEAEARP 284
Score = 79.3 bits (194), Expect = 1e-14
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Frame = +2
Query: 5 DSLDNGP--SFRDNGPPFGE-------SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVE 157
D GP SF +G +G S ++YVGNL W + L +F + G V
Sbjct: 175 DGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEAR 234
Query: 158 VIYDKESGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 289
VIYD++SGRS+GFGFVT S ++ AI+ LDGAD GR +RV+
Sbjct: 235 VIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVS 278
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 291
Score = 169 bits (428), Expect = 1e-41
Identities = 94/208 (45%), Positives = 133/208 (63%), Gaps = 23/208 (11%)
Frame = +2
Query: 44 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 223
P F E + KL+VGNLP+S +S LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81 PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139
Query: 224 DCNTAIEKLDGADYAGRTLRVNF-----------------PNRNRGDAPTPRAPF----- 337
+ A ++ +G + GR +RVN N + G + F
Sbjct: 140 EVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARG 199
Query: 338 -LDPPPSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEA 514
SN+++VGN+ GVDD L +LFSE G V++A+VV DR++GRSRGFGFVT S+
Sbjct: 200 GRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSK 259
Query: 515 EVNQALNKMDGAAIEGRNLRVNMAGERP 598
EVN A++ ++G ++GR++RV+ A ERP
Sbjct: 260 EVNDAIDSLNGVDLDGRSIRVSAAEERP 287
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 292
Score = 168 bits (425), Expect = 2e-41
Identities = 94/208 (45%), Positives = 133/208 (63%), Gaps = 23/208 (11%)
Frame = +2
Query: 44 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 223
P F E + KL+VGNLP+S +S LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82 PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140
Query: 224 DCNTAIEKLDGADYAGRTLRVNF-----------------PNRNRGDAPTPRAPF----- 337
+ A ++ +G + GR +RVN N + G + F
Sbjct: 141 EVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARG 200
Query: 338 -LDPPPSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEA 514
SN+++VGN+ GVDD L +LFSE G V++A+VV DR++GRSRGFGFVT S+
Sbjct: 201 GRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAK 260
Query: 515 EVNQALNKMDGAAIEGRNLRVNMAGERP 598
EVN A++ ++G ++GR++RV+ A ERP
Sbjct: 261 EVNDAIDSLNGIDLDGRSIRVSAAEERP 288
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 273
Score = 167 bits (422), Expect = 5e-41
Identities = 91/189 (48%), Positives = 122/189 (64%), Gaps = 12/189 (6%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
K++VGNLP+S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 248 LDGADYAGRTLRVN------------FPNRNRGDAPTPRAPFLDPPPSNKLFVGNMEGGV 391
+G + GR LRVN F +RG SN+++VGN+ GV
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDS--------SNRVYVGNLAWGV 199
Query: 392 DDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNL 571
D L LFSE GKV++A+VV DR++GRSRGFGFVT S+ EVN A+ +DG + GR +
Sbjct: 200 DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAI 259
Query: 572 RVNMAGERP 598
RV+ A RP
Sbjct: 260 RVSPAEARP 268
Score = 85.9 bits (211), Expect = 1e-16
Identities = 44/94 (46%), Positives = 59/94 (62%)
Frame = +2
Query: 56 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 235
+S ++YVGNL W + + L +F + G V +V+YD++SGRSRGFGFVT SS E+ N
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244
Query: 236 AIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPF 337
AIE LDG D GR +RV + +A PR F
Sbjct: 245 AIESLDGVDLNGRAIRV-----SPAEARPPRRQF 273
Score = 73.6 bits (179), Expect = 7e-13
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +2
Query: 350 PSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQA 529
P K+FVGN+ D L +LF G V V+ D+ TGRSRGFGFVTMS++ EV A
Sbjct: 85 PDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144
Query: 530 LNKMDGAAIEGRNLRVN 580
+ +G ++GR LRVN
Sbjct: 145 CQQFNGYELDGRALRVN 161
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 279
Score = 164 bits (415), Expect = 3e-40
Identities = 89/187 (47%), Positives = 122/187 (65%), Gaps = 10/187 (5%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
K++VGNL +S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 248 LDGADYAGRTLRVNF---PNRNRGDAPTPRAPFLDPP-------PSNKLFVGNMEGGVDD 397
+G + GR LRVN P + + + F SN+++VGN+ GVD
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQ 207
Query: 398 GMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRV 577
L LFSE GKV++A+VV DR++GRSRGFGFVT S+ EVN A+ +DG + GR +RV
Sbjct: 208 DALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRV 267
Query: 578 NMAGERP 598
+ A RP
Sbjct: 268 SPAEARP 274
Score = 86.7 bits (213), Expect = 8e-17
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Frame = +2
Query: 26 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 181
SFR+N G +S ++YVGNL W + + L +F + G V +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232
Query: 182 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPF 337
RSRGFGFVT SS E+ N AIE LDG D GR +RV + +A PR F
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRV-----SPAEARPPRRQF 279
Score = 72.8 bits (177), Expect = 1e-12
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +2
Query: 350 PSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQA 529
P K+FVGN+ D L +LF G V V+ D+ TGRSRGFGFVTMS++ EV A
Sbjct: 85 PDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144
Query: 530 LNKMDGAAIEGRNLRVN 580
+ +G ++GR LRVN
Sbjct: 145 CQQFNGYELDGRALRVN 161
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 324
Score = 149 bits (377), Expect = 8e-36
Identities = 78/184 (42%), Positives = 115/184 (62%), Gaps = 8/184 (4%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
+LYVGNLP+S S +L+ +F + G+V VE++YD+ + RSRGF FVTM SVE+ AI
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 248 LDGADYAGRTLRVNFPNRNRGDAPTPRAP--------FLDPPPSNKLFVGNMEGGVDDGM 403
DG+ GRT++VNFP RG + F+D P +KL+V N+ +
Sbjct: 175 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSP--HKLYVANLSWALTSQG 232
Query: 404 LHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNM 583
L D F++ + A+V+ DR +GRSRGFGF+T S+ +N AL+ M+ +EGR LR+N+
Sbjct: 233 LRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNV 292
Query: 584 AGER 595
AG++
Sbjct: 293 AGQK 296
Score = 77.8 bits (190), Expect = 4e-14
Identities = 41/103 (39%), Positives = 57/103 (55%)
Frame = +2
Query: 50 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 229
F +S KLYV NL W+ S+ L F +VIYD+ SGRSRGFGF+T SS E
Sbjct: 212 FVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAM 271
Query: 230 NTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPFLDPPPSN 358
N+A++ ++ + GR LR+N + AP P ++ P N
Sbjct: 272 NSALDTMNEVELEGRPLRLNVAGQK---APVSSPPVVETSPEN 311
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951178|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_L07, 5'
(602 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit... 208 2e-52
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten... 196 1e-48
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ... 192 1e-47
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea... 191 2e-47
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 188 2e-46
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 188 2e-46
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten... 187 5e-46
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra... 186 7e-46
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs... 186 9e-46
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 186 9e-46
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza... 186 9e-46
tr|Q94EH5|Q94EH5_ARATH AT4g24770/F22K18_30 OS=Arabidopsis thalia... 186 1e-45
tr|Q39209|Q39209_ARATH RNA binding protein (Fragment) OS=Arabido... 186 1e-45
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb... 184 3e-45
tr|Q40270|Q40270_MESCR RNA-binding protein OS=Mesembryanthemum c... 183 8e-45
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs... 181 3e-44
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome... 181 3e-44
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza... 181 3e-44
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ... 179 1e-43
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs... 179 1e-43
tr|Q0Q6S3|Q0Q6S3_LILLO GRSF OS=Lilium longiflorum GN=GRSF PE=2 SV=1 179 1e-43
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza... 179 1e-43
tr|Q41834|Q41834_MAIZE Putative uncharacterized protein OS=Zea m... 179 1e-43
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul... 179 1e-43
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea... 179 1e-43
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea... 179 1e-43
tr|Q650W6|Q650W6_ORYSJ Os09g0565200 protein OS=Oryza sativa subs... 178 2e-43
tr|B8BEL6|B8BEL6_ORYSI Putative uncharacterized protein OS=Oryza... 178 2e-43
tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m... 178 2e-43
tr|A6N0D0|A6N0D0_ORYSI Chloroplast 28 kDa ribonucleoprotein (Fra... 178 2e-43
>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_47163 PE=4 SV=1
Length = 192
Score = 208 bits (530), Expect = 2e-52
Identities = 106/190 (55%), Positives = 138/190 (72%), Gaps = 12/190 (6%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED IE+
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 248 LDGADYAGRTLRVNFP--NRNRGDAP----------TPRAPFLDPPPSNKLFVGNMEGGV 391
LDG D GR L+V+FP +NR P PR D P NK+FVGN+ GV
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQNRPSFPRGEGYQRSERAPRPAARDDP--NKVFVGNLSWGV 118
Query: 392 DDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNL 571
D+G L +LFS++GKV++ARVV DRE+GRSRGFGFVT S +EV+ A++ +DGA +GR L
Sbjct: 119 DNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDSLDGAEFDGREL 178
Query: 572 RVNMAGERPS 601
RVN+AG +P+
Sbjct: 179 RVNLAGNKPA 188
>tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_134646 PE=4 SV=1
Length = 224
Score = 196 bits (497), Expect = 1e-48
Identities = 103/201 (51%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Frame = +2
Query: 5 DSLDNGPSFRDNGPPFGESV---AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKE 175
DS+ +G S D P E KLYVGNLPW+C+S +LA + G+VD+VEVIYDK
Sbjct: 22 DSVADGGS-SDVAAPVAEEEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKI 80
Query: 176 SGRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPFLDPPPS 355
SGRSRGF FVTM++ ED I LDG D GR L+VN+P + D P +
Sbjct: 81 SGRSRGFAFVTMATPEDAQAVINALDGTDMGGRPLKVNYPQSQK-DKPRVERSERPRDDA 139
Query: 356 NKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALN 535
NKLFVGN+ G D+ L+ FSE+G V++A+VV DR++GRSRGFGFVTM + A N A+
Sbjct: 140 NKLFVGNLSWGCDEAALYSFFSEYGTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIE 199
Query: 536 KMDGAAIEGRNLRVNMAGERP 598
+DGA ++GR LRVN+AGE+P
Sbjct: 200 NLDGAELDGRRLRVNLAGEKP 220
>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
PE=4 SV=1
Length = 283
Score = 192 bits (489), Expect = 1e-47
Identities = 97/178 (54%), Positives = 128/178 (71%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
KLY GNLP+SC+S +LAG+ Q GS ++VEV+Y++++GRSRGF FVTMSSVEDCN IE
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171
Query: 248 LDGADYAGRTLRVNFPNRNRGDAPTPRAPFLDPPPSNKLFVGNMEGGVDDGMLHDLFSEH 427
LDG++Y GRTLRVNF D P P+ P L P KLFVGN+ V L+ +F E+
Sbjct: 172 LDGSEYGGRTLRVNF-----SDKPKPKLP-LYPETEYKLFVGNLSWSVTSESLNQVFQEY 225
Query: 428 GKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPS 601
G V+ ARV+ D ETGRSRG+GFV ST+AE++ AL ++G +EGR +R+++A R S
Sbjct: 226 GNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGRRS 283
Score = 82.4 bits (202), Expect = 2e-14
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = +2
Query: 44 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 223
P + E+ KL+VGNL WS SE L VFQ+ G+V V+YD E+GRSRG+GFV S+
Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254
Query: 224 DCNTAIEKLDGADYAGRTLRVNFPNRNR 307
+ +TA+E L+G + GR +R++ R
Sbjct: 255 EMDTALESLNGVELEGRAIRISLAQGRR 282
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +2
Query: 341 DPPPSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEV 520
+ P + KL+ GN+ D L + +G V+ +R+TGRSRGF FVTMS+ +
Sbjct: 106 ESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDC 165
Query: 521 NQALNKMDGAAIEGRNLRVNMA 586
N + +DG+ GR LRVN +
Sbjct: 166 NAVIENLDGSEYGGRTLRVNFS 187
>tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 299
Score = 191 bits (486), Expect = 2e-47
Identities = 95/184 (51%), Positives = 132/184 (71%), Gaps = 6/184 (3%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
K++VGNLPWS +S ELA +F+ G V MVEVIYD+++GRSRGF FVTM++ D + A+EK
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173
Query: 248 LDGADYAGRTLRVNFPNRNRGDAPTPRAPFLDPPPS------NKLFVGNMEGGVDDGMLH 409
+G +Y GRTLRVN D+ PR F + PS N++FVGN+ G DD L
Sbjct: 174 FNGYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLE 233
Query: 410 DLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAG 589
LFS+HGKV+EA+VV DRETGRSRGFGFVT+S+ E+ +A++ +DG+ ++GR ++V +A
Sbjct: 234 QLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISSLDGSDMDGRQIKVTLAE 293
Query: 590 ERPS 601
+P+
Sbjct: 294 TKPA 297
Score = 80.5 bits (197), Expect = 7e-14
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = +2
Query: 344 PPPSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVN 523
P + K+FVGN+ VD L +LF + G V V+ DR+TGRSRGF FVTM+T+A+ +
Sbjct: 109 PSANLKVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADAD 168
Query: 524 QALNKMDGAAIEGRNLRVNMAGERP 598
+A+ K +G +GR LRVN P
Sbjct: 169 EAVEKFNGYEYQGRTLRVNSGPPPP 193
Score = 79.3 bits (194), Expect = 2e-13
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 5 DSLDNGPSFRDNGPPFG-ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 181
DS FR+ P S +++VGNLPW + L +F G V +V+YD+E+G
Sbjct: 195 DSFAPRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETG 254
Query: 182 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRV 286
RSRGFGFVT+SS ++ AI LDG+D GR ++V
Sbjct: 255 RSRGFGFVTLSSPQEIEEAISSLDGSDMDGRQIKV 289
>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
Length = 268
Score = 188 bits (477), Expect = 2e-46
Identities = 98/198 (49%), Positives = 136/198 (68%), Gaps = 10/198 (5%)
Frame = +2
Query: 35 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 214
D F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70 DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128
Query: 215 SVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAP----------FLDPPPSNKL 364
S E+ A+E+ +G + GR LRVN D TPRAP F+D +NK+
Sbjct: 129 SAEEAEAAVEQFNGYAFQGRQLRVNCGPPPPRDESTPRAPRGGGGGGGGGFVD--SANKV 186
Query: 365 FVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMD 544
+VGN+ GVD+ L +LFSE G+VL+A+V+ DR++GRSRGFGFVT + EVN A++ +D
Sbjct: 187 YVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEVNNAISNLD 246
Query: 545 GAAIEGRNLRVNMAGERP 598
G ++GR +RV A +P
Sbjct: 247 GIDLDGRQIRVTAAESKP 264
>tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
Length = 264
Score = 188 bits (477), Expect = 2e-46
Identities = 98/192 (51%), Positives = 141/192 (73%), Gaps = 3/192 (1%)
Frame = +2
Query: 32 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 211
R G F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTM
Sbjct: 73 RSGGDEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 131
Query: 212 SSVEDCNTAIEKLDGADYAGRTLRVNF---PNRNRGDAPTPRAPFLDPPPSNKLFVGNME 382
SSVE+ A+++ +G GR+LRVN P R+R +P+P+ P D +N+++VGN+
Sbjct: 132 SSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRS-SPSPQRPRGD---ANRVYVGNLS 187
Query: 383 GGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEG 562
GVD+ L +LFSE G+VLEAR++ DRE+GRSRGFGFVT + EV A++ +DGA ++G
Sbjct: 188 WGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDG 247
Query: 563 RNLRVNMAGERP 598
R +RV +A +P
Sbjct: 248 RQIRVTVAESKP 259
>tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_147462 PE=4 SV=1
Length = 213
Score = 187 bits (474), Expect = 5e-46
Identities = 94/185 (50%), Positives = 126/185 (68%), Gaps = 7/185 (3%)
Frame = +2
Query: 65 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 244
+K+YVGNLPW+C+S +LA + + G+VD+VEVIYDK SGRSRGF FVTM+S +D I
Sbjct: 23 SKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALIN 82
Query: 245 KLDGADYAGRTLRVNFP----NRNRGDAPTPRAPFLDPPP---SNKLFVGNMEGGVDDGM 403
LDG+D GR L+VNFP ++ R + R P D P NKLFVGN+ G D+
Sbjct: 83 ALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADRRPRDDPNKLFVGNIPWGCDEAA 142
Query: 404 LHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNM 583
+ LFS +G V++A++V DR++GRSRGFGFVTM + A+ +DG ++GR LRVN
Sbjct: 143 MTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNF 202
Query: 584 AGERP 598
AGE+P
Sbjct: 203 AGEKP 207
Score = 67.0 bits (162), Expect = 8e-10
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +2
Query: 329 APFLDPPPSNKLFVGNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMST 508
AP + +K++VGN+ D L ++ S+HG V V+ D+ +GRSRGF FVTM++
Sbjct: 14 APVAEEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMAS 73
Query: 509 EAEVNQALNKMDGAAIEGRNLRVN 580
+ +N +DG+ + GR L+VN
Sbjct: 74 HDDAQALINALDGSDMGGRALKVN 97
>tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein
(Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
Length = 205
Score = 186 bits (473), Expect = 7e-46
Identities = 93/180 (51%), Positives = 131/180 (72%), Gaps = 3/180 (1%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ AIE+
Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81
Query: 248 LDGADYAGRTLRVNF---PNRNRGDAPTPRAPFLDPPPSNKLFVGNMEGGVDDGMLHDLF 418
+G + GR LRVN P R+ +PR + SNKL+VGN+ GVD+ L +LF
Sbjct: 82 FNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLF 141
Query: 419 SEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 598
SE G VL+A+V+ DRE+GRSRGFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 142 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 201
Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/85 (52%), Positives = 55/85 (64%)
Frame = +2
Query: 32 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 211
R G F +S KLYVGNL W ++ L +F + G+V +VIYD+ESGRSRGFGFVT
Sbjct: 111 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 169
Query: 212 SSVEDCNTAIEKLDGADYAGRTLRV 286
S E+ N AI LDG D GR +RV
Sbjct: 170 GSAEEVNNAISNLDGVDLDGRQIRV 194
>tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subsp.
japonica GN=P0519E12.113 PE=4 SV=1
Length = 264
Score = 186 bits (472), Expect = 9e-46
Identities = 92/180 (51%), Positives = 131/180 (72%), Gaps = 3/180 (1%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ A+E+
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140
Query: 248 LDGADYAGRTLRVNF---PNRNRGDAPTPRAPFLDPPPSNKLFVGNMEGGVDDGMLHDLF 418
+G + GR LRVN P R+ +PR + SNKL+VGN+ GVD+ L +LF
Sbjct: 141 FNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLF 200
Query: 419 SEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 598
SE G VL+A+V+ DRE+GRSRGFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 201 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 260
Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/85 (52%), Positives = 55/85 (64%)
Frame = +2
Query: 32 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 211
R G F +S KLYVGNL W ++ L +F + G+V +VIYD+ESGRSRGFGFVT
Sbjct: 170 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 228
Query: 212 SSVEDCNTAIEKLDGADYAGRTLRV 286
S E+ N AI LDG D GR +RV
Sbjct: 229 GSAEEVNNAISNLDGVDLDGRQIRV 253
>tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_34983 PE=4 SV=1
Length = 194
Score = 186 bits (472), Expect = 9e-46
Identities = 96/196 (48%), Positives = 132/196 (67%), Gaps = 19/196 (9%)
Frame = +2
Query: 68 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 247
KLYVGNLPW+C+S +LA + + SV+ V+V+YD++SGRSRGF FVTMS+ E + I++
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 248 LDGADYAGRTLRVNFP-------------NRNRGDAPTPRAP------FLDPPPSNKLFV 370
LDG+D+ GR L+V+FP N RGD + R P LD +NK+F+
Sbjct: 61 LDGSDFGGRPLKVSFPQPRENRDNKPRFGNNERGDRRSDRPPRQGSDRVLD--NTNKMFI 118
Query: 371 GNMEGGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGA 550
GN+ D L +FSE+G V++A+VV DR+TG+SRGFGFVTMS +EV+ A+ +DGA
Sbjct: 119 GNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGA 178
Query: 551 AIEGRNLRVNMAGERP 598
EGR +RV+ AGERP
Sbjct: 179 EFEGREMRVSEAGERP 194
Score = 89.0 bits (219), Expect = 2e-16
Identities = 36/78 (46%), Positives = 60/78 (76%)
Frame = +2
Query: 56 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 235
++ K+++GNL WSC+++ L VF + GSV +V+YD+++G+SRGFGFVTMS+ + +
Sbjct: 111 DNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSN 170
Query: 236 AIEKLDGADYAGRTLRVN 289
A++ LDGA++ GR +RV+
Sbjct: 171 AVQNLDGAEFEGREMRVS 188
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