DK951193 |
Clone id |
TST38A01NGRL0010_L22 |
Library |
TST38 |
Length |
642 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_L22. 5' end sequence. |
Accession |
DK951193 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1498Contig1 |
Sequence |
CTTCCTACTTACTATATCCAAGGATTTAAAGTGATGGCAACGAGGAGTTTGAGCCAGATC TGACAGTGCCGCATTGTTTGATTTGCGGCCGGCCGCGACTGTTTTCTCCATCTTCGTCCT GCAGCGGCTTCTTCCTTTCCAGACTCCAGGGTTCAGTATGGGGCAGACTCTTGGGTGCAT GCAAGTGGATCAGTCAACTGTAGCCATAAAAGAAAACTTTGGGAAGTTTGATCATGTTTT GGAGCCTGGTTGTCATTGTGTACCCTGGTGCCTTGGAAGTTATGTTGTTGGAGTATTATC AATGCGTGTGCAGCAATTAGATGTTCGATGTGAGACAAAAACAAAGGACAATGTATTTGT GAATGTTGTGGCATCTGTACAATATAGAGCTATTCAAACTAATGCTAAGGATGCCTTCTA CAAGCTCACAAATCCTCGCGAACAGATACAGTCTTATGTGTTTGATGTGGTGAGGGCTAC TGTGCCAAAGATGAACTTGGATGATGTCTTTGAGCAAAAAAGTGAGGTTGGAAAGGCGGT TGCTGATGAACTGGAAAAGGCCATGTCCAATTACGGATTTGAGATAGTGCAGACGTTGAT TGTTGACATTGTCCCAGACGATACGGTGAAGCGAGCAATGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P16148 |
Definition |
sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus |
Align length |
50 |
Score (bit) |
70.9 |
E-value |
5.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951193|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_L22, 5' (642 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus GN=P... 71 5e-12 sp|P0ABC7|HFLK_ECOLI Protein hflK OS=Escherichia coli (strain K1... 50 1e-05 sp|P0ABC8|HFLK_ECO57 Protein hflK OS=Escherichia coli O157:H7 GN... 50 1e-05 sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN... 45 2e-04 sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=S... 45 2e-04 sp|Q89A39|HFLK_BUCBP Protein hflK OS=Buchnera aphidicola subsp. ... 45 2e-04 sp|Q58237|Y827_METJA Uncharacterized protein MJ0827 OS=Methanoca... 45 3e-04 sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus... 44 5e-04 sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN... 44 5e-04 sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizo... 44 0.001 sp|P40605|HFLK_VIBPA Protein hflK OS=Vibrio parahaemolyticus GN=... 43 0.001 sp|Q8K914|HFLK_BUCAP Protein hflK OS=Buchnera aphidicola subsp. ... 43 0.001 sp|P57631|HFLK_BUCAI Protein hflK OS=Buchnera aphidicola subsp. ... 41 0.005 sp|Q9VZA4|BND7A_DROME Band 7 protein CG32245 OS=Drosophila melan... 41 0.005 sp|Q9KV09|HFLK_VIBCH Protein hflK OS=Vibrio cholerae GN=hflK PE=... 40 0.013 sp|Q7PPU9|BND7A_ANOGA Band 7 protein AGAP004871 OS=Anopheles gam... 39 0.018 sp|Q16TM5|BND7A_AEDAE Band 7 protein AAEL010189 OS=Aedes aegypti... 39 0.018 sp|O28852|Y1420_ARCFU Uncharacterized protein AF_1420 OS=Archaeo... 36 0.19 sp|P24156|L2CC_DROME Protein l(2)37Cc OS=Drosophila melanogaster... 35 0.33 sp|O83151|HFLK_TREPA Protein hflK OS=Treponema pallidum GN=hflK ... 34 0.74 sp|Q0VAA2|CN16B_HUMAN Uncharacterized protein C14orf166B OS=Homo... 33 0.96 sp|P61243|YCF2_PHYPA Protein ycf2 OS=Physcomitrella patens GN=yc... 32 2.8 sp|Q97FI7|HCP1_CLOAB Hydroxylamine reductase 1 OS=Clostridium ac... 32 2.8 sp|Q6XP49|GLIS3_MOUSE Zinc finger protein GLIS3 OS=Mus musculus ... 30 8.1
>sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1 Length = 184
Score = 70.9 bits (172), Expect = 5e-12 Identities = 32/50 (64%), Positives = 40/50 (80%) Frame = +2
Query: 491 MNLDDVFEQKSEVGKAVADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAM 640 MNLDD+FEQK EV K+V +ELEK M YG+ I L+VDI+PDD+V+RAM Sbjct: 1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAM 50
>sp|P0ABC7|HFLK_ECOLI Protein hflK OS=Escherichia coli (strain K12) GN=hflK PE=1 SV=1 Length = 419
Score = 49.7 bits (117), Expect = 1e-05 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 3/158 (1%) Frame = +2
Query: 173 GCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETKTKDN 352 G + ++ + FGKF H++EPG + P + V V V++L T D Sbjct: 96 GFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDE-VKPVNVEAVRELAASGVMLTSDE 154
Query: 353 VFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVF-EQKSEV 529 V V +VQYR TN + Y +T+P + ++ +R + K +D + E ++ + Sbjct: 155 NVVRVEMNVQYRV--TNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVI 212
Query: 530 GKAVADELEKAMSNY--GFEIVQTLIVDIVPDDTVKRA 637 ELE+ + Y G ++ P + VK A Sbjct: 213 RSDTQRELEETIRPYDMGITLLDVNFQAARPPEEVKAA 250
>sp|P0ABC8|HFLK_ECO57 Protein hflK OS=Escherichia coli O157:H7 GN=hflK PE=3 SV=1 Length = 419
Score = 49.7 bits (117), Expect = 1e-05 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 3/158 (1%) Frame = +2
Query: 173 GCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETKTKDN 352 G + ++ + FGKF H++EPG + P + V V V++L T D Sbjct: 96 GFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDE-VKPVNVEAVRELAASGVMLTSDE 154
Query: 353 VFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVF-EQKSEV 529 V V +VQYR TN + Y +T+P + ++ +R + K +D + E ++ + Sbjct: 155 NVVRVEMNVQYRV--TNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVI 212
Query: 530 GKAVADELEKAMSNY--GFEIVQTLIVDIVPDDTVKRA 637 ELE+ + Y G ++ P + VK A Sbjct: 213 RSDTQRELEETIRPYDMGITLLDVNFQAARPPEEVKAA 250
>sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN=STOML2 PE=1 SV=1 Length = 356
Score = 45.4 bits (106), Expect = 2e-04 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Frame = +2
Query: 185 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 361 V Q + E G+F +LEPG + + L + V S++ ++V ++ T DNV + Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNILIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 362 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 541 + V Y I K A Y + +P + +R+ + K++LD VF ++ + ++ Sbjct: 100 Q-IDGVLYLRIMDPYK-ASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 157
Query: 542 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAM 640 D + +A +G ++ I DI VK +M Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESM 190
>sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=STOML2 PE=2 SV=1 Length = 356
Score = 45.4 bits (106), Expect = 2e-04 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Frame = +2
Query: 185 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 361 V Q + E G+F +LEPG + + L + V S++ ++V ++ T DNV + Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNILIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 362 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 541 + V Y I K A Y + +P + +R+ + K++LD VF ++ + ++ Sbjct: 100 Q-IDGVLYLRIMDPYK-ASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 157
Query: 542 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAM 640 D + +A +G ++ I DI VK +M Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESM 190
>sp|Q89A39|HFLK_BUCBP Protein hflK OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=hflK PE=3 SV=1 Length = 417
Score = 45.4 bits (106), Expect = 2e-04 Identities = 32/125 (25%), Positives = 59/125 (47%) Frame = +2
Query: 128 LLPFQTPGFSMGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMR 307 ++ F T F +G G + +S + FGKF ++ PG H P L V+ + Sbjct: 74 MIIFTTIIFLIGS--GFYFIQESEYGVVTCFGKFSYLANPGLHWKP-ILIQKVIPIDVST 130
Query: 308 VQQLDVRCETKTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVP 487 V++++ T FV V +VQYR + + K + +TNP ++ + +R+ + Sbjct: 131 VREINTSGTILTYSEHFVQVNMTVQYRIV--DPKKYLFSVTNPDNCLRQSINSALRSVIS 188
Query: 488 KMNLD 502 + N+D Sbjct: 189 RSNID 193
>sp|Q58237|Y827_METJA Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii GN=MJ0827 PE=3 SV=1 Length = 199
Score = 45.1 bits (105), Expect = 3e-04 Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 1/116 (0%) Frame = +2
Query: 296 LSMRVQQLDVRC-ETKTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVV 472 + MR + D+ E TKDN V V A V YR I + + A ++ + I + + Sbjct: 63 VDMRTRVTDIPPQEMITKDNAVVKVDAVVYYRVI--DVEKAILEVEDYEYAIINLAQTTL 120
Query: 473 RATVPKMNLDDVFEQKSEVGKAVADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAM 640 RA + M LD+V ++ + + + L++ +G I + + +I P + +K AM Sbjct: 121 RAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAM 176
>sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus GN=Stoml2 PE=1 SV=1 Length = 353
Score = 44.3 bits (103), Expect = 5e-04 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 1/153 (0%) Frame = +2
Query: 185 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 361 V Q + E G+F +LEPG + + L + V S++ ++V ++ T DNV + Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNVLIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 362 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 541 + V Y I K A Y + +P + +R+ + K++LD VF ++ + + Sbjct: 100 Q-IDGVLYLRIMDPYK-ASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANI 157
Query: 542 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAM 640 D + +A +G ++ I DI VK +M Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESM 190
>sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN=Stoml2 PE=1 SV=1 Length = 353
Score = 44.3 bits (103), Expect = 5e-04 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 1/153 (0%) Frame = +2
Query: 185 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 361 V Q + E G+F +LEPG + + L + V S++ ++V ++ T DNV + Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNVLIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 362 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 541 + V Y I K A Y + +P + +R+ + K++LD VF ++ + + Sbjct: 100 Q-IDGVLYLRIMDPYK-ASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANI 157
Query: 542 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAM 640 D + +A +G ++ I DI VK +M Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESM 190
>sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizosaccharomyces pombe GN=SPBC16G5.07c PE=2 SV=1 Length = 354
Score = 43.5 bits (101), Expect = 0.001 Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 1/153 (0%) Frame = +2
Query: 185 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 361 V Q + E G+F +L PG + + + + S++ + L++ ++ T DNV + Sbjct: 56 VPQQVAYVVERMGRFSRILTPGVAFLAPIIDK-IAYIHSLKERALEIPTQSAITLDNVSL 114
Query: 362 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 541 + V Y + K A Y + + I +R+ + ++ LD V ++ + + Sbjct: 115 G-LDGVLYIQVYDPYK-ASYGVEDADYAISQLAQTTMRSEIGRLTLDHVLRERQSLNIHI 172
Query: 542 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAM 640 D + KA ++G ++ I DI P ++V AM Sbjct: 173 TDAINKAAESWGIRCLRHEIRDIRPPESVVMAM 205
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q94JS7 |
Definition |
tr|Q94JS7|Q94JS7_ORYSA Hypersensitive-induced response protein OS=Oryza sativa |
Align length |
161 |
Score (bit) |
263.0 |
E-value |
9.0e-69 |
Report |
|