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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951195
Clone id TST38A01NGRL0010_L24
Library
Length 649
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_L24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CCTTGATGATCTTACTGGATTTGAAATCACATACTTACTGGAGCTCCCAGAACCCTACAG
CTTTGTCTTCACATGGTTTGTGGTGTTGCCCATCACATTCTTCATCGCCCAGTTTCTTAC
CAATGCAATTCTGAAAGAGTTTATCATTCTCAAGGGTCCCTGCCCCAACTGTGGAGCTTA
TAACAACTCCTTTTTTGGTACAATCCTAACAATTCCAAGTGGTGGTGATGCCAACATTGT
CAAATGTGAAAAGTGTAACTCAATGCTGAAGTTTGAACTCAATACTCGCTTAATTACATT
AGAGAGCACAGCTACAGATAAGGGCAAGGCACCCAAAAAAGTCGCATCAAGTGCAAGAGC
CAACTGATCTGTACTCTCAACACCTTTTTCACAATGGCCGAGGAAGATTTGTCGTTTGAA
ATATATGCTGGACTTGCTGCTTGAAAATGTAAGGGGCTTGCCAGACCTTTGTAGCAGTAG
CAGAAATAGGTATCTTTAGTAAGGAGTATCAAGTATTTGACCACGGCACTATGCCTGGCC
CGAAATGGTGCTTTGACATGCAAAGCAACTCGGTAGCTCAAGTGTACAGACATTGGGCAA
TTCAATTGAACTTCTGGAGGTGAGAAGTGAAGCTCCAAAGTAGTTTGCT
■■Homology search results ■■ -
sp_hit_id Q8H112
Definition sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana
Align length 100
Score (bit) 141.0
E-value 3.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951195|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_L24, 5'
         (649 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Ara...   141   3e-33
sp|Q8GYC7|PGL1B_ARATH PGR5-like protein 1B, chloroplastic OS=Ara...   136   1e-31
sp|Q6FRU8|PNG1_CANGA Peptide-N(4)-(N-acetyl-beta-glucosaminyl)as...    33   1.7  
sp|A0LLH3|OXAA_SYNFM Inner membrane protein oxaA OS=Syntrophobac...    32   3.8  
sp|Q60347|Y042_METJA Uncharacterized protein MJ0042 OS=Methanoca...    31   4.9  

>sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic
           OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1
          Length = 324

 Score =  141 bits (355), Expect = 3e-33
 Identities = 60/100 (60%), Positives = 78/100 (78%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDD+TGFEITY++ELPEPYSF+FTWF  +P+  ++A  +T  I+K+F+ILKGPCPNCG  
Sbjct: 219 LDDITGFEITYIMELPEPYSFIFTWFAAVPVIVYLALSITKLIIKDFLILKGPCPNCGTE 278

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITL 301
           N SFFGTIL+I SGG  N VKC  C + + ++  +RLITL
Sbjct: 279 NTSFFGTILSISSGGKTNTVKCTNCGTAMVYDSGSRLITL 318


>sp|Q8GYC7|PGL1B_ARATH PGR5-like protein 1B, chloroplastic
           OS=Arabidopsis thaliana GN=PGRL1B PE=1 SV=1
          Length = 313

 Score =  136 bits (342), Expect = 1e-31
 Identities = 61/100 (61%), Positives = 77/100 (77%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDD+TGFEITYLLELPEP+SF+FTWF  +P   ++A  LT  ILK+F+ILKGPCPNCG  
Sbjct: 208 LDDITGFEITYLLELPEPFSFIFTWFAAVPAIVYLALSLTKLILKDFLILKGPCPNCGTE 267

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITL 301
           N SFFGTIL+IP+  + N VKC  C + + ++  +RLITL
Sbjct: 268 NVSFFGTILSIPNDSNTNNVKCSGCGTEMVYDSGSRLITL 307


>sp|Q6FRU8|PNG1_CANGA
           Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine
           amidase OS=Candida glabrata GN=PNG1 PE=3 SV=1
          Length = 348

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
 Frame = +2

Query: 152 KGPCPNCGAYNNSFFGTILTIPSG-------GDANIVKCEKCNSMLKFELNTRLITLEST 310
           K  C +CGA  +   G  +  P+        G   +  C+KCNS ++F      I L  T
Sbjct: 113 KPVCKSCGASGDDINGAAIQAPTNEEAKFNCGSVEVYHCQKCNSEVRFPRYNDPIKLLET 172

Query: 311 ATDK 322
            T +
Sbjct: 173 RTGR 176


>sp|A0LLH3|OXAA_SYNFM Inner membrane protein oxaA OS=Syntrophobacter
           fumaroxidans (strain DSM 10017 / MPOB) GN=oxaA PE=3 SV=1
          Length = 553

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
 Frame = +2

Query: 104 IAQFLTNAILKEFIILKGPCPNCGAYNNSFFGTILTIPSGGDANIVK-CEKCNSMLKFEL 280
           +  F T  + K  ++LK P       NN F   I+ +  GG   + +  +    +L+   
Sbjct: 236 LKNFTTKDLSKSDLVLKPPMTWVAYENNFFINAIIPVAEGGYQFVPRILDATKGLLQLVY 295

Query: 281 NTRLITLESTATDKGK-----APKKVASSARAN*SVLSTPFSQWPRKICR-LKYMLD 433
            T    LE   T   K      PK++++ ARA   + S     W   I + L Y+LD
Sbjct: 296 LTDPFQLEGNETKSFKLRFYIGPKELSTLARAEHQLASAVDYGWFTFIAKPLVYVLD 352


>sp|Q60347|Y042_METJA Uncharacterized protein MJ0042
           OS=Methanocaldococcus jannaschii GN=MJ0042 PE=4 SV=1
          Length = 215

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 161 CPNCGAYNNSFFGTILTIPSGGDANIVKCEKCNSML 268
           CP CGA+       ++   SGGDA  VKC KC + +
Sbjct: 5   CPECGAWIY-----VVEEDSGGDAMEVKCPKCGTSI 35
tr_hit_id A9NWM0
Definition tr|A9NWM0|A9NWM0_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 122
Score (bit) 164.0
E-value 4.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951195|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_L24, 5'
         (649 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NWM0|A9NWM0_PICSI Putative uncharacterized protein OS=Picea...   164   4e-39
tr|A9T0F2|A9T0F2_PHYPA Predicted protein OS=Physcomitrella paten...   162   1e-38
tr|Q7F1E4|Q7F1E4_ORYSJ Os08g0526300 protein OS=Oryza sativa subs...   154   6e-36
tr|B8B8V8|B8B8V8_ORYSI Putative uncharacterized protein OS=Oryza...   154   6e-36
tr|B7E6T2|B7E6T2_ORYSJ cDNA clone:001-038-D09, full insert seque...   154   6e-36
tr|A3BV17|A3BV17_ORYSJ Putative uncharacterized protein OS=Oryza...   154   6e-36
tr|Q6UUH9|Q6UUH9_ORYSJ Putative uncharacterized protein OS=Oryza...   149   1e-34
tr|A9PGK5|A9PGK5_POPTR Putative uncharacterized protein OS=Popul...   146   9e-34
tr|A7QKC6|A7QKC6_VITVI Chromosome chr2 scaffold_112, whole genom...   137   4e-31
tr|Q84M73|Q84M73_ORYSJ Os03g0857400 protein OS=Oryza sativa subs...   133   1e-29
tr|B8ANS3|B8ANS3_ORYSI Putative uncharacterized protein OS=Oryza...   133   1e-29
tr|B4G1U4|B4G1U4_MAIZE Putative uncharacterized protein OS=Zea m...   129   2e-28
tr|B4FTA7|B4FTA7_MAIZE Putative uncharacterized protein OS=Zea m...   129   2e-28
tr|A8ITK6|A8ITK6_CHLRE Predicted protein OS=Chlamydomonas reinha...    91   8e-17
tr|A3APX8|A3APX8_ORYSJ Putative uncharacterized protein OS=Oryza...    91   8e-17
tr|B7FRN6|B7FRN6_PHATR Predicted protein OS=Phaeodactylum tricor...    43   0.015
tr|B8BZQ3|B8BZQ3_THAPS Putative uncharacterized protein OS=Thala...    39   0.27 
tr|A3M2G0|A3M2G0_ACIBT Putative efflux protein OS=Acinetobacter ...    36   2.3  
tr|A9RYD4|A9RYD4_PHYPA Predicted protein (Fragment) OS=Physcomit...    34   6.7  
tr|Q98R61|Q98R61_MYCPU Putative uncharacterized protein MYPU_149...    34   8.8  

>tr|A9NWM0|A9NWM0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 350

 Score =  164 bits (415), Expect = 4e-39
 Identities = 79/122 (64%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDDLTGFEITYLLELPEPYSF+FTWF+VLP T+ IA+ +TNAILK+F+ILKG CPNCG  
Sbjct: 228 LDDLTGFEITYLLELPEPYSFIFTWFIVLPATYLIARAITNAILKDFLILKGTCPNCGTE 287

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITLESTATD--KGKAPKKVASSA 355
           N SFFGTILT+PSGG  N VKCE C + L ++ +TRLITL     +  +   PKK A +A
Sbjct: 288 NISFFGTILTVPSGGPLNEVKCENCGTALMYDSDTRLITLAEKKQEGSQDSKPKKTARTA 347

Query: 356 RA 361
            A
Sbjct: 348 SA 349


>tr|A9T0F2|A9T0F2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_138266 PE=4 SV=1
          Length = 287

 Score =  162 bits (411), Expect = 1e-38
 Identities = 79/119 (66%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDD+TGFEITYLLELPEPYSF+FTWFVVLP TF +AQ LTN +LK+ +IL GPCPNCGA 
Sbjct: 161 LDDITGFEITYLLELPEPYSFLFTWFVVLPTTFLMAQSLTNIVLKDALILNGPCPNCGAG 220

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITLESTATD-KGKAPKKVASSA 355
            NS+FG+ILTIPSGG +N VKCE C S + F+ +TRLITL+ +  + K   PKK A  A
Sbjct: 221 VNSYFGSILTIPSGGPSNNVKCEACGSSMIFDKDTRLITLDDSPPEKKAPRPKKPAKPA 279


>tr|Q7F1E4|Q7F1E4_ORYSJ Os08g0526300 protein OS=Oryza sativa subsp.
           japonica GN=OJ1191_A10.128 PE=4 SV=1
          Length = 329

 Score =  154 bits (388), Expect = 6e-36
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDDLTGFEITYLLELPEP+SF+FTWF  LP+ F++AQ +T+AI+K+F+ILKGPCPNCG  
Sbjct: 224 LDDLTGFEITYLLELPEPFSFIFTWFAALPLIFWVAQAITSAIVKDFLILKGPCPNCGNE 283

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITLESTA 313
           N SFFGTIL++PSGG  N VKC  C+S L ++  +RLITL  TA
Sbjct: 284 NLSFFGTILSVPSGGARNSVKCANCSSSLVYDSASRLITLPETA 327


>tr|B8B8V8|B8B8V8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_29970 PE=4 SV=1
          Length = 326

 Score =  154 bits (388), Expect = 6e-36
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDDLTGFEITYLLELPEP+SF+FTWF  LP+ F++AQ +T+AI+K+F+ILKGPCPNCG  
Sbjct: 221 LDDLTGFEITYLLELPEPFSFIFTWFAALPLIFWVAQAITSAIVKDFLILKGPCPNCGNE 280

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITLESTA 313
           N SFFGTIL++PSGG  N VKC  C+S L ++  +RLITL  TA
Sbjct: 281 NLSFFGTILSVPSGGARNSVKCANCSSSLVYDSASRLITLPETA 324


>tr|B7E6T2|B7E6T2_ORYSJ cDNA clone:001-038-D09, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 177

 Score =  154 bits (388), Expect = 6e-36
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDDLTGFEITYLLELPEP+SF+FTWF  LP+ F++AQ +T+AI+K+F+ILKGPCPNCG  
Sbjct: 72  LDDLTGFEITYLLELPEPFSFIFTWFAALPLIFWVAQAITSAIVKDFLILKGPCPNCGNE 131

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITLESTA 313
           N SFFGTIL++PSGG  N VKC  C+S L ++  +RLITL  TA
Sbjct: 132 NLSFFGTILSVPSGGARNSVKCANCSSSLVYDSASRLITLPETA 175


>tr|A3BV17|A3BV17_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_026889 PE=4 SV=1
          Length = 294

 Score =  154 bits (388), Expect = 6e-36
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDDLTGFEITYLLELPEP+SF+FTWF  LP+ F++AQ +T+AI+K+F+ILKGPCPNCG  
Sbjct: 189 LDDLTGFEITYLLELPEPFSFIFTWFAALPLIFWVAQAITSAIVKDFLILKGPCPNCGNE 248

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITLESTA 313
           N SFFGTIL++PSGG  N VKC  C+S L ++  +RLITL  TA
Sbjct: 249 NLSFFGTILSVPSGGARNSVKCANCSSSLVYDSASRLITLPETA 292


>tr|Q6UUH9|Q6UUH9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OSJNBa0003M24.13 PE=4 SV=1
          Length = 203

 Score =  149 bits (377), Expect = 1e-34
 Identities = 69/104 (66%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDDLTGFEITYLLELPEP+SF+FTWF  LP+ F++AQ +T+AI+K+F+ILKGPC NCG  
Sbjct: 98  LDDLTGFEITYLLELPEPFSFIFTWFAALPLIFWVAQAITSAIVKDFLILKGPCLNCGNE 157

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITLESTA 313
           N SFFGTIL++PSGG  N VKC  C S L ++  +RLITL  TA
Sbjct: 158 NLSFFGTILSVPSGGARNSVKCANCGSSLVYDSASRLITLPETA 201


>tr|A9PGK5|A9PGK5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 323

 Score =  146 bits (369), Expect = 9e-34
 Identities = 66/100 (66%), Positives = 82/100 (82%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDDLTGFEITYLLELPEP+SF+FTWF  +P+  ++A  LTNAI+K+F+ILKGPCPNCG  
Sbjct: 218 LDDLTGFEITYLLELPEPFSFLFTWFAAVPLIVWLALTLTNAIVKDFLILKGPCPNCGTE 277

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITL 301
           N SFFGTIL+I SGG +N +KC  C++ L ++  TRLITL
Sbjct: 278 NGSFFGTILSISSGGTSNTLKCSNCSTELVYDSKTRLITL 317


>tr|A7QKC6|A7QKC6_VITVI Chromosome chr2 scaffold_112, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00001064001
           PE=4 SV=1
          Length = 326

 Score =  137 bits (346), Expect = 4e-31
 Identities = 60/100 (60%), Positives = 79/100 (79%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           LDD+TGFEIT+LLEL EP+SF+FTWF  +P+ F+++Q +T  ILK+F+ILKGPCPNCG  
Sbjct: 221 LDDVTGFEITFLLELQEPFSFIFTWFAAVPLIFWLSQTITKFILKDFLILKGPCPNCGTE 280

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITL 301
           N SFFGTIL+I +GG  N +KC  C + + ++  TRLITL
Sbjct: 281 NVSFFGTILSISNGGTTNNLKCSNCETQMVYDSKTRLITL 320


>tr|Q84M73|Q84M73_ORYSJ Os03g0857400 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0059G06.17 PE=2 SV=1
          Length = 324

 Score =  133 bits (334), Expect = 1e-29
 Identities = 59/100 (59%), Positives = 79/100 (79%)
 Frame = +2

Query: 2   LDDLTGFEITYLLELPEPYSFVFTWFVVLPITFFIAQFLTNAILKEFIILKGPCPNCGAY 181
           +D+LTGFEI  + +LPEP+ F+FTWF  LP+  FIAQ +TNAI+ +F+ILKGPCPNCGA 
Sbjct: 221 IDELTGFEIN-IFQLPEPFGFIFTWFAALPLILFIAQSITNAIVNDFLILKGPCPNCGAE 279

Query: 182 NNSFFGTILTIPSGGDANIVKCEKCNSMLKFELNTRLITL 301
           N SFFGTIL++ SGG+ N VKC  C++ + ++  +RLITL
Sbjct: 280 NLSFFGTILSVSSGGETNKVKCADCSTEMVYDSKSRLITL 319