DK951199 |
Clone id |
TST38A01NGRL0010_M05 |
Library |
TST38 |
Length |
634 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_M05. 5' end sequence. |
Accession |
DK951199 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL183Contig1 |
Sequence |
GCGCAGGCGCAAGTCCGTGAGGGGGTGCATTGTGAGCCCTGATCTATCCGTTCTGAACCT TGTGATTGTGAAGCAAGGGAGGGAGCGTGGGAGCGACCTGAAGCGCGAGCAGCCCTTCTC GTCACAATGAAGCTCAACATAGCTAATCCGACTACTGGGTGTCAGAAAAAATTGGAGATT GATGATGACTCCAAACTACGGGCCTTCTATAACAAGCGCCTCTCACAAGAAGTCCTTGGT GATGCACTTGGCGATGAGTTCAAAGGTTACATGTTCAAGATCATGGGGGGCTGTGATAAG CAAGGTTTTCCTATGAAGCAAGGAGTTCTCATCCCTGGCCGTGCTCGACTCTTAATGCAC CGAGGTACTTCCTGTTTCCGAGGGTATGGAAGGAGAAAGGGTGAGCGCAGGCGCAAGTCC GTGAGGGGGTGCATTGTGAGCCCTGATCTATCCGTTCTGAACCTTGTGATTGTGAAGCAA GGGGAGCAACATCTACCTGGTCTCACTGACACTGAGAAGCCTAGGATGAGGGGCCCAAAG AGGGCTAGCAAGATCAGAAAGCTTTTCAATTTGTCCAAGGAGGATGATGTTAGAAAGTAC GTTAACACCTACAGGCGAACTTTCACATCTGCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M3V8 |
Definition |
sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 OS=Asparagus officinalis |
Align length |
168 |
Score (bit) |
275.0 |
E-value |
2.0e-73 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951199|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_M05, 5' (634 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 OS=Asparagus offici... 275 2e-73 sp|P51430|RS62_ARATH 40S ribosomal protein S6-2 OS=Arabidopsis t... 271 2e-72 sp|O48549|RS61_ARATH 40S ribosomal protein S6-1 OS=Arabidopsis t... 268 2e-71 sp|P62755|RS6_RAT 40S ribosomal protein S6 OS=Rattus norvegicus ... 194 2e-49 sp|P62754|RS6_MOUSE 40S ribosomal protein S6 OS=Mus musculus GN=... 194 2e-49 sp|Q4R4K6|RS6_MACFA 40S ribosomal protein S6 OS=Macaca fascicula... 194 2e-49 sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens GN=... 194 2e-49 sp|Q5E995|RS6_BOVIN 40S ribosomal protein S6 OS=Bos taurus GN=RP... 194 2e-49 sp|Q90YR8|RS6_ICTPU 40S ribosomal protein S6 OS=Ictalurus puncta... 191 3e-48 sp|Q9YGF2|RS6_ONCMY 40S ribosomal protein S6 OS=Oncorhynchus myk... 191 4e-48 sp|P47838|RS6_CHICK 40S ribosomal protein S6 OS=Gallus gallus GN... 190 5e-48 sp|P39017|RS6_XENLA 40S ribosomal protein S6 OS=Xenopus laevis G... 189 8e-48 sp|O01727|RS6_BRAFL 40S ribosomal protein S6 OS=Branchiostoma fl... 189 1e-47 sp|Q9BMX5|RS6_APLCA 40S ribosomal protein S6 OS=Aplysia californ... 187 3e-47 sp|Q95V32|RS6_SPOFR 40S ribosomal protein S6 OS=Spodoptera frugi... 184 3e-46 sp|Q94624|RS6_MANSE 40S ribosomal protein S6 OS=Manduca sexta GN... 184 4e-46 sp|P29327|RS6_DROME 40S ribosomal protein S6 OS=Drosophila melan... 181 2e-45 sp|Q9NEN6|RS6_CAEEL 40S ribosomal protein S6 OS=Caenorhabditis e... 181 3e-45 sp|Q2PQM1|RS6_GLOMM 40S ribosomal protein S6 OS=Glossina morsita... 180 5e-45 sp|P02365|RS6_YEAST 40S ribosomal protein S6 OS=Saccharomyces ce... 179 8e-45 sp|Q6FJH3|RS6_CANGA 40S ribosomal protein S6 OS=Candida glabrata... 179 8e-45 sp|Q9C0Z7|RS6B_SCHPO 40S ribosomal protein S6-B OS=Schizosacchar... 179 1e-44 sp|P41798|RS6_KLUMA 40S ribosomal protein S6 OS=Kluyveromyces ma... 179 1e-44 sp|P05752|RS6A_SCHPO 40S ribosomal protein S6-A OS=Schizosacchar... 179 1e-44 sp|Q9U761|RS6_AEDAE 40S ribosomal protein S6 OS=Aedes aegypti GN... 177 4e-44 sp|Q74ZK3|RS6_ASHGO 40S ribosomal protein S6 OS=Ashbya gossypii ... 176 7e-44 sp|Q9U762|RS6_AEDAL 40S ribosomal protein S6 OS=Aedes albopictus... 175 2e-43 sp|Q6CM04|RS6_KLULA 40S ribosomal protein S6 OS=Kluyveromyces la... 174 4e-43 sp|Q6BXH8|RS6_DEBHA 40S ribosomal protein S6 OS=Debaryomyces han... 174 4e-43 sp|Q6C169|RS6_YARLI 40S ribosomal protein S6 OS=Yarrowia lipolyt... 173 8e-43
>sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1 Length = 251
Score = 275 bits (702), Expect = 2e-73 Identities = 135/168 (80%), Positives = 142/168 (84%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIANPTTGCQKKLEIDDD KLRAFY+KR+SQEV GDALG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+ Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTN 168
Score = 52.0 bits (123), Expect = 3e-06 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>sp|P51430|RS62_ARATH 40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=2 SV=3 Length = 249
Score = 271 bits (693), Expect = 2e-72 Identities = 133/168 (79%), Positives = 141/168 (83%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK N+ANPTTGCQKKLEIDDD KLRAF++KRLSQEV GDALG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNLVIVK+G Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT+ Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTN 168
Score = 52.0 bits (123), Expect = 3e-06 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>sp|O48549|RS61_ARATH 40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2 Length = 250
Score = 268 bits (684), Expect = 2e-71 Identities = 131/168 (77%), Positives = 139/168 (82%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK N+ANPTTGCQKKLEIDDD KLRAFY+KR+SQEV GDALG+EFKGY+FKI GGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT+ Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTN 168
Score = 52.0 bits (123), Expect = 3e-06 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>sp|P62755|RS6_RAT 40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1 Length = 249
Score = 194 bits (494), Expect = 2e-49 Identities = 99/159 (62%), Positives = 118/159 (74%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV DALG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL GR RLL+ +G SC+ CIV +LSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYV 603 + +PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
Score = 44.7 bits (104), Expect = 4e-04 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQGRE 85 R+RKSVRGCIV +LSVLNLVIVK+G + Sbjct: 92 RKRKSVRGCIVDANLSVLNLVIVKKGEK 119
>sp|P62754|RS6_MOUSE 40S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1 Length = 249
Score = 194 bits (494), Expect = 2e-49 Identities = 99/159 (62%), Positives = 118/159 (74%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV DALG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL GR RLL+ +G SC+ CIV +LSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYV 603 + +PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
Score = 44.7 bits (104), Expect = 4e-04 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQGRE 85 R+RKSVRGCIV +LSVLNLVIVK+G + Sbjct: 92 RKRKSVRGCIVDANLSVLNLVIVKKGEK 119
>sp|Q4R4K6|RS6_MACFA 40S ribosomal protein S6 OS=Macaca fascicularis GN=RPS6 PE=2 SV=1 Length = 249
Score = 194 bits (494), Expect = 2e-49 Identities = 99/159 (62%), Positives = 118/159 (74%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV DALG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL GR RLL+ +G SC+ CIV +LSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYV 603 + +PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
Score = 44.7 bits (104), Expect = 4e-04 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQGRE 85 R+RKSVRGCIV +LSVLNLVIVK+G + Sbjct: 92 RKRKSVRGCIVDANLSVLNLVIVKKGEK 119
>sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1 Length = 249
Score = 194 bits (494), Expect = 2e-49 Identities = 99/159 (62%), Positives = 118/159 (74%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV DALG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL GR RLL+ +G SC+ CIV +LSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYV 603 + +PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
Score = 44.7 bits (104), Expect = 4e-04 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQGRE 85 R+RKSVRGCIV +LSVLNLVIVK+G + Sbjct: 92 RKRKSVRGCIVDANLSVLNLVIVKKGEK 119
>sp|Q5E995|RS6_BOVIN 40S ribosomal protein S6 OS=Bos taurus GN=RPS6 PE=2 SV=1 Length = 249
Score = 194 bits (494), Expect = 2e-49 Identities = 99/159 (62%), Positives = 118/159 (74%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV DALG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL GR RLL+ +G SC+ CIV +LSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYV 603 + +PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
Score = 44.7 bits (104), Expect = 4e-04 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQGRE 85 R+RKSVRGCIV +LSVLNLVIVK+G + Sbjct: 92 RKRKSVRGCIVDANLSVLNLVIVKKGEK 119
>sp|Q90YR8|RS6_ICTPU 40S ribosomal protein S6 OS=Ictalurus punctatus GN=rps6 PE=2 SV=1 Length = 249
Score = 191 bits (485), Expect = 3e-48 Identities = 96/159 (60%), Positives = 117/159 (73%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV D LGDE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL GR RLL+ +G SC+ CIV +LSVLNLVI+++GE Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYV 603 + +PGLTD+ PR GPKRAS+IRKLFNLSKEDDVR+YV Sbjct: 119 KDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
Score = 43.1 bits (100), Expect = 0.001 Identities = 19/28 (67%), Positives = 25/28 (89%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQGRE 85 R+RKSVRGCIV +LSVLNLVI+++G + Sbjct: 92 RKRKSVRGCIVDANLSVLNLVIIRKGEK 119
>sp|Q9YGF2|RS6_ONCMY 40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1 Length = 249
Score = 191 bits (484), Expect = 4e-48 Identities = 97/159 (61%), Positives = 116/159 (72%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV D LGDE+KGYM +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL GR RLL+ +G SC+ CI +LSVLNLVI+K+GE Sbjct: 61 FPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGE 118
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYV 603 + +PGLTD+ PR GPKRASKIRKLFNL+KEDDVR+YV Sbjct: 119 KDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV 157
Score = 41.6 bits (96), Expect = 0.003 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQGRE 85 R+RKSVRGCI +LSVLNLVI+K+G + Sbjct: 92 RKRKSVRGCIGDANLSVLNLVIIKKGEK 119
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNX7 |
Definition |
tr|A9NNX7|A9NNX7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
168 |
Score (bit) |
275.0 |
E-value |
2.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951199|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_M05, 5' (634 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNX7|A9NNX7_PICSI Putative uncharacterized protein OS=Picea... 275 2e-72 tr|B3TM45|B3TM45_ELAGV S6 ribosomal protein OS=Elaeis guineensis... 273 8e-72 tr|Q3HVK4|Q3HVK4_SOLTU Ribosomal protein S6-like protein OS=Sola... 271 2e-71 tr|B3TLK9|B3TLK9_ELAGV S6 ribosomal protein OS=Elaeis guineensis... 271 2e-71 tr|Q6SPR3|Q6SPR3_SOYBN Ribosomal protein S6 OS=Glycine max GN=RP... 271 3e-71 tr|Q2VCJ5|Q2VCJ5_SOLTU Putative uncharacterized protein OS=Solan... 271 3e-71 tr|Q2HTS1|Q2HTS1_MEDTR Ribosomal protein S6e OS=Medicago truncat... 271 3e-71 tr|A9NU91|A9NU91_PICSI Putative uncharacterized protein OS=Picea... 270 7e-71 tr|Q4AC02|Q4AC02_BRACM 117M18_18 OS=Brassica campestris GN=117M1... 269 9e-71 tr|B2BF98|B2BF98_SOYBN Ribosomal protein S6 OS=Glycine max PE=4 ... 268 2e-70 tr|B7FIJ8|B7FIJ8_MEDTR Putative uncharacterized protein (Fragmen... 268 2e-70 tr|A9P9Y9|A9P9Y9_POPTR Putative uncharacterized protein OS=Popul... 268 2e-70 tr|A7R4H9|A7R4H9_VITVI Chromosome undetermined scaffold_690, who... 268 2e-70 tr|A9PE99|A9PE99_POPTR Putative uncharacterized protein OS=Popul... 268 3e-70 tr|A9P9D9|A9P9D9_POPTR Putative uncharacterized protein OS=Popul... 268 3e-70 tr|A7QT39|A7QT39_VITVI Chromosome undetermined scaffold_165, who... 267 3e-70 tr|Q8LH97|Q8LH97_ORYSJ Os07g0622100 protein OS=Oryza sativa subs... 267 5e-70 tr|A2YNT9|A2YNT9_ORYSI Putative uncharacterized protein OS=Oryza... 267 5e-70 tr|Q75LR5|Q75LR5_ORYSJ Os03g0390000 protein OS=Oryza sativa subs... 266 8e-70 tr|A9TT29|A9TT29_PHYPA Predicted protein OS=Physcomitrella paten... 266 8e-70 tr|A9TKT5|A9TKT5_PHYPA Predicted protein OS=Physcomitrella paten... 266 8e-70 tr|A9TKR6|A9TKR6_PHYPA Predicted protein OS=Physcomitrella paten... 266 8e-70 tr|A9RVN0|A9RVN0_PHYPA Predicted protein OS=Physcomitrella paten... 266 8e-70 tr|A2XHI9|A2XHI9_ORYSI Putative uncharacterized protein OS=Oryza... 266 8e-70 tr|A7NUV2|A7NUV2_VITVI Chromosome chr18 scaffold_1, whole genome... 265 2e-69 tr|Q9FYS0|Q9FYS0_MAIZE 40S ribosomal protein S6 OS=Zea mays GN=r... 265 2e-69 tr|O04014|O04014_MAIZE 40S ribosomal protein S6 OS=Zea mays GN=r... 265 2e-69 tr|B6T4E7|B6T4E7_MAIZE 40S ribosomal protein S6 OS=Zea mays PE=2... 265 2e-69 tr|B6T1H0|B6T1H0_MAIZE 40S ribosomal protein S6 OS=Zea mays PE=2... 265 2e-69 tr|A9TKT4|A9TKT4_PHYPA Predicted protein (Fragment) OS=Physcomit... 263 5e-69
>tr|A9NNX7|A9NNX7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 249
Score = 275 bits (702), Expect = 2e-72 Identities = 136/168 (80%), Positives = 142/168 (84%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIANPTTGCQKKLEIDDD KLRAFY+KRL+QEV GDALG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRLAQEVNGDALGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTF S Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFQS 168
Score = 52.0 bits (123), Expect = 3e-05 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>tr|B3TM45|B3TM45_ELAGV S6 ribosomal protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 249
Score = 273 bits (697), Expect = 8e-72 Identities = 134/168 (79%), Positives = 142/168 (84%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIANPTTGCQKKLEIDDD KLRAF++KR+SQEV GDALG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+ Sbjct: 121 NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTT 168
Score = 52.0 bits (123), Expect = 3e-05 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>tr|Q3HVK4|Q3HVK4_SOLTU Ribosomal protein S6-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 249
Score = 271 bits (694), Expect = 2e-71 Identities = 133/168 (79%), Positives = 142/168 (84%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIANPTTGCQKKLEIDDD KLRAFY+KR+SQEV GDALG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL++RGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLYRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFT+ Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLGKDDDVRKYVNTYRRTFTN 168
Score = 52.0 bits (123), Expect = 3e-05 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>tr|B3TLK9|B3TLK9_ELAGV S6 ribosomal protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 249
Score = 271 bits (694), Expect = 2e-71 Identities = 133/168 (79%), Positives = 142/168 (84%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIANPTTGCQKKLEIDDD KLRAF++KR+SQEV GD+LG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+ Sbjct: 121 NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTT 168
Score = 52.0 bits (123), Expect = 3e-05 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>tr|Q6SPR3|Q6SPR3_SOYBN Ribosomal protein S6 OS=Glycine max GN=RPS6 PE=2 SV=1 Length = 247
Score = 271 bits (692), Expect = 3e-71 Identities = 132/168 (78%), Positives = 142/168 (84%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIANPTTGCQKKLEIDDD KLRAF++KR+SQEV+GDALG+EFKGY+FKI GGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVIGDALGEEFKGYVFKITGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNL+IVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLIIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+ Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTT 168
Score = 51.6 bits (122), Expect = 4e-05 Identities = 24/26 (92%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNL+IVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLIIVKKG 119
>tr|Q2VCJ5|Q2VCJ5_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 249
Score = 271 bits (692), Expect = 3e-71 Identities = 133/168 (79%), Positives = 142/168 (84%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIANPTTGCQKKLEIDDD KLRAF++KR+SQEV GDALG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL++RGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLYRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR FT+ Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRNFTT 168
Score = 52.0 bits (123), Expect = 3e-05 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>tr|Q2HTS1|Q2HTS1_MEDTR Ribosomal protein S6e OS=Medicago truncatula GN=MtrDRAFT_AC149801g17v2 PE=4 SV=1 Length = 248
Score = 271 bits (692), Expect = 3e-71 Identities = 132/168 (78%), Positives = 142/168 (84%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK N+ANPTTGCQKKLEIDDD KLRAF++KR+SQEVLGDALG+EFKGY+FKI GGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDMKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTD EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT+ Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTT 168
Score = 52.0 bits (123), Expect = 3e-05 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
>tr|A9NU91|A9NU91_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 253
Score = 270 bits (689), Expect = 7e-71 Identities = 133/168 (79%), Positives = 141/168 (83%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIANPTTGCQKKLEIDDD KLRAFY+KRLSQEV GDALG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVNGDALGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVS DLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGFGRRKGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTDTEKPRMRGPKRASKIRKLFNL+K+DDVRKYVNTYRRTF + Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRTFVT 168
Score = 48.9 bits (115), Expect = 3e-04 Identities = 24/26 (92%), Positives = 25/26 (96%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVS DLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSQDLSVLNLVIVKKG 119
>tr|Q4AC02|Q4AC02_BRACM 117M18_18 OS=Brassica campestris GN=117M18_18 PE=4 SV=1 Length = 249
Score = 269 bits (688), Expect = 9e-71 Identities = 132/168 (78%), Positives = 141/168 (83%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK N+ANPTTGCQKKLEIDDD KLRAFY+KRLSQEV GDALG+EFKGY+FKIMGGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVS DLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 + LPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRR FT+ Sbjct: 121 KDLPGLTDTEKPRMRGPKRASKIRKLFNLGKDDDVRKYVNTYRRKFTN 168
Score = 49.3 bits (116), Expect = 2e-04 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQGRE 85 RRRKSVRGCIVS DLSVLNLVIVK+G + Sbjct: 94 RRRKSVRGCIVSQDLSVLNLVIVKKGEK 121
>tr|B2BF98|B2BF98_SOYBN Ribosomal protein S6 OS=Glycine max PE=4 SV=1 Length = 247
Score = 268 bits (686), Expect = 2e-70 Identities = 132/168 (78%), Positives = 141/168 (83%) Frame = +1
Query: 127 MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 306 MK NIA+PTTGCQKKLEIDDD KLRAF++KR+SQEV GDALG+EFKGY+FKI GGCDKQG Sbjct: 1 MKFNIASPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQG 60
Query: 307 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKQGE 486 FPMKQGVL PGR RLL+HRGT CF CIVSPDLSVLNLVIVK+GE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 487 QHLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTS 630 LPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+ Sbjct: 121 NDLPGLTDAEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTT 168
Score = 52.0 bits (123), Expect = 3e-05 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2
Query: 2 RRRKSVRGCIVSPDLSVLNLVIVKQG 79 RRRKSVRGCIVSPDLSVLNLVIVK+G Sbjct: 94 RRRKSVRGCIVSPDLSVLNLVIVKKG 119
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