DK951200 |
Clone id |
TST38A01NGRL0010_M06 |
Library |
TST38 |
Length |
649 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_M06. 5' end sequence. |
Accession |
DK951200 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL385Contig1 |
Sequence |
GGAACTTCTCCTGTTCGATTTGCTTCCTTGAGGAGTGGTTCTCCTGTGGGCTCTTGTGAA GCAGGCTCACCTTCTCTATCTGACTTGTCAGACCAACTTTCCCATCTGAGAACCCTTTTT CCTGAGATGGATGGGCAGCTAATTGAAAAGGTCTTGGAGTCTAGTGGAAACAACCTTGAC TCTGCAATACGAAGTCTCAATGAGCTTCGGCTTAGCTCTGATGTCGTGGCAAATGCCTTG AATTTCTCCAATGACAATAGTGCACCAAACCTGACTCTTGGGCAGGAAGGTGTGGCAAAT CAATCAGCTGTTTTGAATGCCGTGGAGGTTGATAAAGCGAATCAGGGTCAATCTGAAGGG AGTTTTTGGGCACACCTCTTTGTACGAGAAATGCTTAGTGCTGCCAATCTGGATGATGCC AAGGACAGAGCAACTAGAGCTTTGGAAGCCTTCGAGAAGACAGTGCTGTCCCGTAGTGGC TCTGTCTTTGAGGAGTTCCAAAAGGAAAATGCTTTGCTCAAGGAACAAATCCATAATCTG ATTCGTGAGAATCACATCTTGAAGCGGGCTGTGACAATTCAACATGAAAGGCATGCAGAG CATGAGAACTGCCCGCAGGAGATGCAGCGCTTGAAGCAGTTGATAGCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4K5I1 |
Definition |
sp|Q4K5I1|Y5434_PSEF5 Putative metalloprotease PFL_5434 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) |
Align length |
97 |
Score (bit) |
42.0 |
E-value |
0.003 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PBC1 |
Definition |
tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
184 |
Score (bit) |
155.0 |
E-value |
3.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951200|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_M06, 5' (649 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Popul... 155 3e-36 tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genom... 154 4e-36 tr|A9PHI2|A9PHI2_POPTR Putative uncharacterized protein OS=Popul... 150 5e-35 tr|A9U3T0|A9U3T0_PHYPA Predicted protein OS=Physcomitrella paten... 150 6e-35 tr|A3A3V8|A3A3V8_ORYSJ Putative uncharacterized protein OS=Oryza... 148 2e-34 tr|Q67WV6|Q67WV6_ORYSJ Os06g0642900 protein OS=Oryza sativa subs... 147 4e-34 tr|A9T5N7|A9T5N7_PHYPA Predicted protein OS=Physcomitrella paten... 147 4e-34 tr|A2X1Q4|A2X1Q4_ORYSI Putative uncharacterized protein OS=Oryza... 147 7e-34 tr|B6TIC6|B6TIC6_MAIZE CUE domain containing protein OS=Zea mays... 145 2e-33 tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea... 143 1e-32 tr|Q0E3B5|Q0E3B5_ORYSJ Os02g0184500 protein OS=Oryza sativa subs... 141 3e-32 tr|B4FYB7|B4FYB7_MAIZE Putative uncharacterized protein OS=Zea m... 140 7e-32 tr|Q6H880|Q6H880_ORYSJ Putative uncharacterized protein OJ1572_F... 140 9e-32 tr|B6TCB4|B6TCB4_MAIZE CUE domain containing protein OS=Zea mays... 139 2e-31 tr|B6T3P8|B6T3P8_MAIZE CUE domain containing protein OS=Zea mays... 138 3e-31 tr|B8B0S4|B8B0S4_ORYSI Putative uncharacterized protein OS=Oryza... 137 6e-31 tr|B4G1V5|B4G1V5_MAIZE Putative uncharacterized protein OS=Zea m... 137 7e-31 tr|Q94K99|Q94K99_ARATH Putative uncharacterized protein At5g3244... 133 8e-30 tr|Q8H1Q3|Q8H1Q3_ARATH Putative uncharacterized protein At5g3244... 133 8e-30 tr|Q6UUK2|Q6UUK2_ORYSJ Putative uncharacterized protein (Putativ... 123 1e-26 tr|A5B8J1|A5B8J1_VITVI Putative uncharacterized protein OS=Vitis... 123 1e-26 tr|Q0J3G0|Q0J3G0_ORYSJ Os09g0119100 protein OS=Oryza sativa subs... 119 2e-25 tr|A7PNK4|A7PNK4_VITVI Chromosome chr8 scaffold_23, whole genome... 118 4e-25 tr|A5C5J6|A5C5J6_VITVI Putative uncharacterized protein OS=Vitis... 111 4e-23 tr|A3BW42|A3BW42_ORYSJ Putative uncharacterized protein OS=Oryza... 110 1e-22 tr|A2YYJ3|A2YYJ3_ORYSI Putative uncharacterized protein OS=Oryza... 110 1e-22 tr|B8AP74|B8AP74_ORYSI Putative uncharacterized protein OS=Oryza... 102 2e-20 tr|B3SLB2|B3SLB2_ARALP At5g32440-like protein (Fragment) OS=Arab... 98 5e-19 tr|B3SL95|B3SL95_ARALY At5g32440-like protein (Fragment) OS=Arab... 98 5e-19 tr|B3SL85|B3SL85_ARALP At5g32440-like protein (Fragment) OS=Arab... 98 5e-19
>tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 286
Score = 155 bits (391), Expect = 3e-36 Identities = 90/184 (48%), Positives = 126/184 (68%), Gaps = 6/184 (3%) Frame = +1
Query: 115 LFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSS----DVVANALNFSNDNSAPNLTLG 282 +FP+MD QLIEKVLE G++LDSAIRSLN+LRL S A+ + ++++ P Sbjct: 70 IFPDMDKQLIEKVLEECGDDLDSAIRSLNDLRLGSAENFSAAADKSDVIDESNVP----- 124
Query: 283 QEGVANQSAVLNAVEVDKANQGQS-EGSFWAHLFVREMLSAANLDDAKDRATRALEAFEK 459 +GVA A E A+ S +G+ W LFVREM+SA+N+DDA+ RA+RALE EK Sbjct: 125 AQGVATTGAEAPPTEDLSASAHLSLDGAEWVELFVREMMSASNIDDARARASRALEVLEK 184
Query: 460 TVLSRSGS-VFEEFQKENALLKEQIHNLIRENHILKRAVTIQHERHAEHENCPQEMQRLK 636 ++ +R+G+ + F +E+ +LKEQ+ LI+EN ILKRAV+IQHER E+E QEMQ+LK Sbjct: 185 SICARAGAEAVKNFHQEHMILKEQVQALIQENTILKRAVSIQHERQKEYEERNQEMQQLK 244
Query: 637 QLIA 648 QL++ Sbjct: 245 QLVS 248
>tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016953001 PE=4 SV=1 Length = 283
Score = 154 bits (389), Expect = 4e-36 Identities = 97/220 (44%), Positives = 131/220 (59%), Gaps = 6/220 (2%) Frame = +1
Query: 4 TSPVRFASLRSGSPVGSCEAGXXXXXXXXXXXXXXRTLFPEMDGQLIEKVLESSGNNLDS 183 +SPVRF+ RS + + + R LFP+MD Q +EK LE GN+LDS Sbjct: 30 SSPVRFSPPRS---ISASPSQSQSTASQASVLDHLRALFPDMDKQFLEKALEECGNDLDS 86
Query: 184 AIRSLNELRLSSDVVANALNFSNDNSAPNLT----LGQEGVANQSAVLNAVEVDKANQGQ 351 I+SLNELRL S N L F S L L +GVA + + + E A + Sbjct: 87 TIKSLNELRLGS--AQNNLGFGAGTSDVGLETKVQLQSQGVAATNGEVVSSEDPSAPKNL 144
Query: 352 S-EGSFWAHLFVREMLSAANLDDAKDRATRALEAFEKTVLSR-SGSVFEEFQKENALLKE 525 S +G+ W LFVREM+SA+N+DDA+ RA+RALE EK++ +R S + F +EN +LKE Sbjct: 145 SMDGAEWVELFVREMMSASNMDDARARASRALEVLEKSICARASAEAAQSFHQENLMLKE 204
Query: 526 QIHNLIRENHILKRAVTIQHERHAEHENCPQEMQRLKQLI 645 Q+ L++EN ILKRAV+IQHER E E QE+Q LKQ++ Sbjct: 205 QVEALLQENIILKRAVSIQHERQKESEERNQELQHLKQVV 244
>tr|A9PHI2|A9PHI2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 285
Score = 150 bits (380), Expect = 5e-35 Identities = 95/219 (43%), Positives = 132/219 (60%), Gaps = 4/219 (1%) Frame = +1
Query: 4 TSPVRFASLRSGSPVGSCEAGXXXXXXXXXXXXXXRTL---FPEMDGQLIEKVLESSGNN 174 +SPVRF+ RS + + S A L FP+MD QL+EK LE G++ Sbjct: 31 SSPVRFSPPRSNT-IASNPASFNFSSSSSSSSAFVEQLAAIFPDMDKQLLEKALEECGDD 89
Query: 175 LDSAIRSLNELRLSSDVVANALNFSNDNSAPNLTLGQEGVANQSAVLNAVEVDKANQGQS 354 LD AIRSLNELRL+S +A +D + +G+A A + + Sbjct: 90 LDLAIRSLNELRLASVENFSAAAVKSD-VMDKANVPPQGLAPTDAEAPTEDPSASALLSM 148
Query: 355 EGSFWAHLFVREMLSAANLDDAKDRATRALEAFEKTVLSRSGS-VFEEFQKENALLKEQI 531 +G W LFVREM+SA+N+DDA+ RA+RALEA EK++ +R+G+ + F +EN +LKEQ+ Sbjct: 149 DGMEWVELFVREMMSASNIDDARARASRALEALEKSICTRAGAEAAKSFHQENMMLKEQM 208
Query: 532 HNLIRENHILKRAVTIQHERHAEHENCPQEMQRLKQLIA 648 LI+EN ILKRAV+IQHER E E QE+Q+LKQL++ Sbjct: 209 QALIQENTILKRAVSIQHERQKEFEESSQELQQLKQLVS 247
>tr|A9U3T0|A9U3T0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228060 PE=4 SV=1 Length = 285
Score = 150 bits (379), Expect = 6e-35 Identities = 96/220 (43%), Positives = 123/220 (55%), Gaps = 4/220 (1%) Frame = +1
Query: 1 GTSPVRFASLRSGSPVGSCEAGXXXXXXXXXXXXXXRTLFPEMDGQLIEKVLESSGNNLD 180 G SP+ FA+ S P GS LFP+M+ ++EKVL +S N+LD Sbjct: 30 GNSPLWFATATSTPPSGSSPC-FELRPEADLLLSQLHALFPDMEEHVVEKVLGASNNDLD 88
Query: 181 SAIRSLNELRLSSDVVANALNFSNDNSA----PNLTLGQEGVANQSAVLNAVEVDKANQG 348 AI+SLN LRLSS A A +D A P L + + S ++ Sbjct: 89 YAIKSLNLLRLSSSQQA-ATTLPSDQDATVLCPPLPIFSDCPDELSMQQQQQAESTSSPV 147
Query: 349 QSEGSFWAHLFVREMLSAANLDDAKDRATRALEAFEKTVLSRSGSVFEEFQKENALLKEQ 528 QSEG W L V +M +A+NLDDA+ RA LE FEK +LSRS V E+ +KEN LKEQ Sbjct: 148 QSEGGKWVELLVTQMQNASNLDDARARAMCTLEGFEKAILSRSARVIEDVEKENVALKEQ 207
Query: 529 IHNLIRENHILKRAVTIQHERHAEHENCPQEMQRLKQLIA 648 LI +N ILKRAVTIQHER +HE QE+Q++KQL+A Sbjct: 208 NRRLIHDNQILKRAVTIQHERQKQHEVRAQELQQMKQLLA 247
>tr|A3A3V8|A3A3V8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005480 PE=4 SV=1 Length = 279
Score = 148 bits (374), Expect = 2e-34 Identities = 87/182 (47%), Positives = 115/182 (63%), Gaps = 4/182 (2%) Frame = +1
Query: 112 TLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSAPNLTLGQEG 291 +LFP MD QL+E+ LE+SG+++DSAI+SLNEL L S V + SN L L EG Sbjct: 63 SLFPHMDPQLLERALEASGDDIDSAIKSLNELCLESAAVGD----SNSVLPAALKLSAEG 118
Query: 292 VANQSAVLNAVEVDKAN---QGQSEGSFWAHLFVREMLSAANLDDAKDRATRALEAFEKT 462 V N + E A Q GS W LFVREM+SA+++DDA+ RA+RALEA EK+ Sbjct: 119 VVNNGHLDVLTENPHATENFQTNHHGSEWVELFVREMMSASDIDDARARASRALEALEKS 178
Query: 463 VLSRSGS-VFEEFQKENALLKEQIHNLIRENHILKRAVTIQHERHAEHENCPQEMQRLKQ 639 ++ R+G+ KEN +LKEQ+ +REN +LKRAV IQHER E + QE+ LKQ Sbjct: 179 IMERAGTEAVHNLHKENVMLKEQLAIYLRENAVLKRAVAIQHERQKEFDERTQEVHSLKQ 238
Query: 640 LI 645 L+ Sbjct: 239 LV 240
>tr|Q67WV6|Q67WV6_ORYSJ Os06g0642900 protein OS=Oryza sativa subsp. japonica GN=P0416A11.21 PE=2 SV=1 Length = 275
Score = 147 bits (372), Expect = 4e-34 Identities = 85/184 (46%), Positives = 120/184 (65%), Gaps = 6/184 (3%) Frame = +1
Query: 112 TLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL-SSDVVANALNFSNDNSAPNLTLGQ- 285 +LFP MD QL+E L++SG++LDSAI+SLN LRL S++ + +A ++N P Sbjct: 53 SLFPGMDPQLLEGALDASGDDLDSAIKSLNNLRLESTEAILSATGCKSENGLPTAVYPSV 112
Query: 286 EGVANQSAVLNAVEVDKAN---QGQSEGSFWAHLFVREMLSAANLDDAKDRATRALEAFE 456 EG+ N V A E A Q + GS W LFVREM +A+++ DA+ RA+RALE E Sbjct: 113 EGIVNNGGVSTANEHPAAADSCQTGNNGSEWVELFVREMTNASDMGDARARASRALEVLE 172
Query: 457 KTVLSRSGS-VFEEFQKENALLKEQIHNLIRENHILKRAVTIQHERHAEHENCPQEMQRL 633 K+++ R+G+ + QKEN +LKEQ+ ++REN +LKRAV IQHER E + QE+Q L Sbjct: 173 KSIVERTGADAAQNLQKENMMLKEQLTVVLRENAVLKRAVAIQHERQKEFDERSQEVQSL 232
Query: 634 KQLI 645 KQL+ Sbjct: 233 KQLV 236
>tr|A9T5N7|A9T5N7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191879 PE=4 SV=1 Length = 287
Score = 147 bits (372), Expect = 4e-34 Identities = 94/220 (42%), Positives = 125/220 (56%), Gaps = 5/220 (2%) Frame = +1
Query: 1 GTSPVRFASLRSGSPVGSCEAGXXXXXXXXXXXXXXRTLFPEMDGQLIEKVLESSGNNLD 180 G SP+ FAS S P GS + LFP+M+ Q +EKVLE+S N+LD Sbjct: 30 GNSPIWFASATSSPPSGSSPS-FEPRLEAGLLLSQLHALFPDMEEQAVEKVLEASNNDLD 88
Query: 181 SAIRSLNELRLSSDVVANALNFSNDN---SAPNLTLGQEGV-ANQSAVLNAVEVDKANQG 348 AI+SLN LRL S A + + S+P+L+ + +S + E + N Sbjct: 89 YAIKSLNLLRLYSSQQATPPHPDEKDASGSSPSLSSFPSRLDEGRSQQVQQQEAEYTNST 148
Query: 349 -QSEGSFWAHLFVREMLSAANLDDAKDRATRALEAFEKTVLSRSGSVFEEFQKENALLKE 525 QSEG W L V +M +A++LDDA+ RA LE FEK VLSRS ++ ++ QKEN LKE Sbjct: 149 VQSEGVKWVELLVTQMQNASDLDDARARAMCTLEGFEKAVLSRSAAIIDDIQKENVALKE 208
Query: 526 QIHNLIRENHILKRAVTIQHERHAEHENCPQEMQRLKQLI 645 LI +N ILKRAV IQHERH +HE E+Q +KQL+ Sbjct: 209 HNRGLIHDNQILKRAVAIQHERHQDHEGRVLELQHVKQLL 248
>tr|A2X1Q4|A2X1Q4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06132 PE=4 SV=1 Length = 279
Score = 147 bits (370), Expect = 7e-34 Identities = 86/182 (47%), Positives = 114/182 (62%), Gaps = 4/182 (2%) Frame = +1
Query: 112 TLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSAPNLTLGQEG 291 +LFP MD QL+E+ LE+SG+++DSAI+SLNEL L S V + SN L L EG Sbjct: 63 SLFPHMDPQLLERALEASGDDIDSAIKSLNELCLESAAVGD----SNSVLPAALKLSAEG 118
Query: 292 VANQSAVLNAVEVDKAN---QGQSEGSFWAHLFVREMLSAANLDDAKDRATRALEAFEKT 462 V N + E A Q GS W LFVREM+SA+++DDA+ RA+RALEA EK+ Sbjct: 119 VVNNGHLDVLTENPHATENFQTNHHGSEWVELFVREMMSASDIDDARARASRALEALEKS 178
Query: 463 VLSRSGS-VFEEFQKENALLKEQIHNLIRENHILKRAVTIQHERHAEHENCPQEMQRLKQ 639 ++ R+G+ KEN +LKEQ+ +REN +LKR V IQHER E + QE+ LKQ Sbjct: 179 IMERAGTEAVHNLHKENVMLKEQLAIYLRENAVLKRGVAIQHERQKEFDERTQEVHSLKQ 238
Query: 640 LI 645 L+ Sbjct: 239 LV 240
>tr|B6TIC6|B6TIC6_MAIZE CUE domain containing protein OS=Zea mays PE=2 SV=1 Length = 282
Score = 145 bits (366), Expect = 2e-33 Identities = 84/183 (45%), Positives = 122/183 (66%), Gaps = 6/183 (3%) Frame = +1
Query: 115 LFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL-SSDVVANALNFSNDNSAPN-LTLGQE 288 LFP+MD QL+EK LE+SG++LDSAI+SLN LRL S++ + ++ F ++N + E Sbjct: 62 LFPDMDPQLLEKALEASGDDLDSAIKSLNLLRLESAEAILSSTGFKSENGQHTAIQPAVE 121
Query: 289 GVAN---QSAVLNAVEVDKANQGQSEGSFWAHLFVREMLSAANLDDAKDRATRALEAFEK 459 G++N + + VD Q GS W LFVREM +A+++DDA+ RA+RALEA EK Sbjct: 122 GISNGGVDTTTEHHPTVDNY-QTSKNGSEWVELFVREMTNASDIDDARARASRALEALEK 180
Query: 460 TVLSRSGS-VFEEFQKENALLKEQIHNLIRENHILKRAVTIQHERHAEHENCPQEMQRLK 636 +++ R+G+ + KEN +LKEQ+ ++REN +LKRAV IQHER E + E+Q LK Sbjct: 181 SIVERAGAEATQNLHKENMMLKEQLTVVLRENAVLKRAVAIQHERQKEFDERSHEVQSLK 240
Query: 637 QLI 645 QL+ Sbjct: 241 QLV 243
>tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 289
Score = 143 bits (360), Expect = 1e-32 Identities = 85/186 (45%), Positives = 116/186 (62%), Gaps = 6/186 (3%) Frame = +1
Query: 109 RTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSD---VVANALNFSNDNSAPNLTL 279 R LFP+MD Q +E VLES GN+L SAI+SLNELRL + + + +S S + T Sbjct: 66 RGLFPDMDEQHLEAVLESCGNDLASAIKSLNELRLGRERDSIPCKSTAYSIIASHVDQTT 125
Query: 280 GQE---GVANQSAVLNAVEVDKANQGQSEGSFWAHLFVREMLSAANLDDAKDRATRALEA 450 G+ + V N A GS W L ++EM +A+N+DDA+ RA+RALEA Sbjct: 126 EVNTDIGLPVEDRVANDQVGGAAAAIPVNGSDWVELLLQEMQNASNMDDARVRASRALEA 185
Query: 451 FEKTVLSRSGSVFEEFQKENALLKEQIHNLIRENHILKRAVTIQHERHAEHENCPQEMQR 630 EK ++SR+GS+ E QKEN +L++Q+ L R+N ILKRAV IQHER EH+ E+Q Sbjct: 186 LEKAIVSRTGSMAENLQKENVVLRQQVEGLSRDNSILKRAVAIQHERQKEHDERGNELQN 245
Query: 631 LKQLIA 648 LKQL++ Sbjct: 246 LKQLLS 251
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