DK951207 |
Clone id |
TST38A01NGRL0010_M13 |
Library |
TST38 |
Length |
647 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_M13. 5' end sequence. |
Accession |
DK951207 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL698Contig1 |
Sequence |
CTTCTGTATAAAAACCTAATCGTCACTTCACCTGCATTTACAAGCGTTTTAATAGCGTTG CAGAGGACTGCGTTTCTGCAGTTGGACAACAGCTGGACATGGACTTCGGCAGCGTCAACA ACAACACCCAGAACACCCCTACCTCGCAGCAGGGGGAGGACGAGAAGAAGCCTCTGGACC AACATCTCAGCCTTAAAGTCAAAGGCCAGGATGGTAACGAGGTTTTCTTCAGAATCAAGC GGTCAACACAGTTGAGGAAGCTGATGAATGCATATTGTGAAAGGCAGTCTGTTGATCCAA ATTCTATTGCTTTCCTTTTTGATGGGAGACGATTAAGGGCTGAACAGACACCCGCAGAGC TGGAGATGGAAGAAGGAGATGAGATAGATGCTATGCTGCATCAGACTGGGGGTTTCTCTC CGTGAATGGGCTTGTCTTTATCTTGAATTTTCTGGTCAGATGTCAGAATTTTACCTGCAC TCCAATGGTGACTGAATTAAGTACCTGCTTTTGCTACATATATAAAGCCATAATGCACAT GTTTTGTCTATTCAAGTACTTTGTATGATTCTGGCGATCAAGGGTTTTGTACTCAAAAGC TTTAGTAATCATTCTGTAAAGCCTCAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P55852 |
Definition |
sp|P55852|SMT3_ARATH Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana |
Align length |
88 |
Score (bit) |
150.0 |
E-value |
7.0e-36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SMD1 |
Definition |
tr|Q9SMD1|Q9SMD1_SOLLC SUMO protein OS=Solanum lycopersicum |
Align length |
89 |
Score (bit) |
156.0 |
E-value |
8.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951207|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_M13, 5' (625 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SMD1|Q9SMD1_SOLLC SUMO protein OS=Solanum lycopersicum GN=s... 156 8e-37 tr|A9NQT9|A9NQT9_PICSI Putative uncharacterized protein OS=Picea... 156 1e-36 tr|A9NN85|A9NN85_PICSI Putative uncharacterized protein OS=Picea... 156 1e-36 tr|A9SAQ5|A9SAQ5_PHYPA Predicted protein OS=Physcomitrella paten... 152 2e-35 tr|A2TKE7|A2TKE7_PEA Ubiquitin-like protein (Fragment) OS=Pisum ... 152 2e-35 tr|B6T938|B6T938_MAIZE Ubiquitin-like protein SMT3 OS=Zea mays P... 151 3e-35 tr|B4FNC9|B4FNC9_MAIZE Putative uncharacterized protein OS=Zea m... 151 3e-35 tr|A5C9H9|A5C9H9_VITVI Putative uncharacterized protein (Chromos... 151 3e-35 tr|A7PX89|A7PX89_VITVI Chromosome chr12 scaffold_36, whole genom... 150 5e-35 tr|A7QZ01|A7QZ01_VITVI Chromosome undetermined scaffold_260, who... 150 6e-35 tr|A5BU70|A5BU70_VITVI Putative uncharacterized protein OS=Vitis... 150 6e-35 tr|Q547B9|Q547B9_ARATH Small ubiquitin-like modifier 1 OS=Arabid... 150 8e-35 tr|B8YBH5|B8YBH5_MAIZE SUMO1b protein OS=Zea mays GN=SUMO1b PE=4... 150 8e-35 tr|A9TTS3|A9TTS3_PHYPA Predicted protein OS=Physcomitrella paten... 150 8e-35 tr|Q9FLP6|Q9FLP6_ARATH Ubiquitin-like protein SMT3-like (AT5g551... 149 1e-34 tr|Q8LSH9|Q8LSH9_PHAVU Ubiquitin-like protein SMT3 (Fragment) OS... 149 1e-34 tr|Q0JGK7|Q0JGK7_ORYSJ cDNA clone:001-006-C03, full insert seque... 149 1e-34 tr|A2WYE1|A2WYE1_ORYSI Putative uncharacterized protein OS=Oryza... 149 1e-34 tr|Q8RZU9|Q8RZU9_ORYSJ cDNA clone:001-103-A02, full insert seque... 149 2e-34 tr|B8R520|B8R520_NICBE SUMO OS=Nicotiana benthamiana PE=4 SV=1 149 2e-34 tr|A2WYE0|A2WYE0_ORYSI Putative uncharacterized protein OS=Oryza... 149 2e-34 tr|O23759|O23759_CICAR Ubiquitin-like protein OS=Cicer arietinum... 144 3e-33 tr|B7FGG6|B7FGG6_MEDTR Putative uncharacterized protein OS=Medic... 144 4e-33 tr|A9PGM7|A9PGM7_POPTR Putative uncharacterized protein OS=Popul... 143 9e-33 tr|Q5TIQ0|Q5TIQ0_CANSA Ubiquitin-like protein SMT3 (Fragment) OS... 136 9e-31 tr|A3A0Y3|A3A0Y3_ORYSJ Putative uncharacterized protein OS=Oryza... 127 4e-28 tr|Q2VU49|Q2VU49_SCHMA Small ubiquitin modifier 2 OS=Schistosoma... 112 2e-23 tr|Q7XBP4|Q7XBP4_BIGNA Small ubiquitin-like modifier OS=Bigelowi... 106 1e-21 tr|B6K574|B6K574_SCHJP Ubiquitin-like protein pmt3/smt3 OS=Schiz... 105 2e-21 tr|Q2Q4H1|Q2Q4H1_PARTE Small ubiquitin-related modifier III (Chr... 101 4e-20
>tr|Q9SMD1|Q9SMD1_SOLLC SUMO protein OS=Solanum lycopersicum GN=sumo PE=4 SV=1 Length = 105
Score = 156 bits (395), Expect = 8e-37 Identities = 77/89 (86%), Positives = 84/89 (94%), Gaps = 2/89 (2%) Frame = +3
Query: 153 GEDEKKPLDQ--HLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDG 326 G+++KKP DQ H++LKVKGQDGNEVFFRIKRSTQ+RKLMNAYC+RQSVD NSIAFLFDG Sbjct: 8 GDEDKKPNDQMVHINLKVKGQDGNEVFFRIKRSTQMRKLMNAYCDRQSVDMNSIAFLFDG 67
Query: 327 RRLRAEQTPAELEMEEGDEIDAMLHQTGG 413 RRLRAEQTP ELEMEEGDEIDAMLHQTGG Sbjct: 68 RRLRAEQTPDELEMEEGDEIDAMLHQTGG 96
>tr|A9NQT9|A9NQT9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 102
Score = 156 bits (394), Expect = 1e-36 Identities = 77/88 (87%), Positives = 83/88 (94%), Gaps = 2/88 (2%) Frame = +3
Query: 156 EDEKKPLDQ--HLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDGR 329 E+E+KPLDQ H++LKVKGQDGNEVFFRIKRSTQLRKLMNAYC+RQS+D NSIAFLFDGR Sbjct: 13 EEERKPLDQGAHINLKVKGQDGNEVFFRIKRSTQLRKLMNAYCDRQSIDFNSIAFLFDGR 72
Query: 330 RLRAEQTPAELEMEEGDEIDAMLHQTGG 413 RLR EQTP ELEMEEGDEIDAMLHQTGG Sbjct: 73 RLRGEQTPDELEMEEGDEIDAMLHQTGG 100
>tr|A9NN85|A9NN85_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 105
Score = 156 bits (394), Expect = 1e-36 Identities = 77/88 (87%), Positives = 83/88 (94%), Gaps = 2/88 (2%) Frame = +3
Query: 156 EDEKKPLDQ--HLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDGR 329 E+EKKP+DQ H++LKVKGQDGNEVFFRIKRSTQLRKLMNAYC+RQSVD NSIAFLFDGR Sbjct: 16 EEEKKPMDQGAHINLKVKGQDGNEVFFRIKRSTQLRKLMNAYCDRQSVDFNSIAFLFDGR 75
Query: 330 RLRAEQTPAELEMEEGDEIDAMLHQTGG 413 RLR EQTP ELEME+GDEIDAMLHQTGG Sbjct: 76 RLRGEQTPEELEMEDGDEIDAMLHQTGG 103
>tr|A9SAQ5|A9SAQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163856 PE=4 SV=1 Length = 106
Score = 152 bits (384), Expect = 2e-35 Identities = 75/91 (82%), Positives = 83/91 (91%), Gaps = 3/91 (3%) Frame = +3
Query: 156 EDEKKPLD---QHLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDG 326 +DEKKPLD QH++LKVKGQDG EVFFRIK + LRKLMNAYC+RQSVDP+SIAFLFDG Sbjct: 15 QDEKKPLDGAGQHINLKVKGQDGGEVFFRIKSTATLRKLMNAYCDRQSVDPSSIAFLFDG 74
Query: 327 RRLRAEQTPAELEMEEGDEIDAMLHQTGGFS 419 RRLRAEQTPAEL+ME+GDEIDAMLHQTGG S Sbjct: 75 RRLRAEQTPAELDMEDGDEIDAMLHQTGGAS 105
>tr|A2TKE7|A2TKE7_PEA Ubiquitin-like protein (Fragment) OS=Pisum sativum PE=2 SV=1 Length = 94
Score = 152 bits (383), Expect = 2e-35 Identities = 78/90 (86%), Positives = 83/90 (92%), Gaps = 3/90 (3%) Frame = +3
Query: 153 GEDEKKPLDQ---HLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFD 323 GED KKP DQ H++LKVKGQDGNEVFFRIKRSTQL+KLMNAYC+RQSVD NSIAFLFD Sbjct: 3 GED-KKPTDQGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFD 61
Query: 324 GRRLRAEQTPAELEMEEGDEIDAMLHQTGG 413 GRRLRAEQTP ELEME+GDEIDAMLHQTGG Sbjct: 62 GRRLRAEQTPDELEMEDGDEIDAMLHQTGG 91
>tr|B6T938|B6T938_MAIZE Ubiquitin-like protein SMT3 OS=Zea mays PE=2 SV=1 Length = 130
Score = 151 bits (382), Expect = 3e-35 Identities = 77/99 (77%), Positives = 87/99 (87%), Gaps = 2/99 (2%) Frame = +3
Query: 153 GEDEKKPLD--QHLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDG 326 GE++KKP + H++LKVKGQDGNEVFFRIKRSTQL+KLMNAYC+RQSVD N+IAFLFDG Sbjct: 5 GEEDKKPAEGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDG 64
Query: 327 RRLRAEQTPAELEMEEGDEIDAMLHQTGGFSP*MGLSLS 443 RRLR EQTP ELEME+GDEIDAMLHQTG SP +G S S Sbjct: 65 RRLRGEQTPDELEMEDGDEIDAMLHQTGCCSP-IGFSFS 102
>tr|B4FNC9|B4FNC9_MAIZE Putative uncharacterized protein OS=Zea mays GN=SUMO1a PE=4 SV=1 Length = 99
Score = 151 bits (382), Expect = 3e-35 Identities = 74/92 (80%), Positives = 83/92 (90%), Gaps = 2/92 (2%) Frame = +3
Query: 153 GEDEKKPLD--QHLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDG 326 GE++KKP + H++LKVKGQDGNEVFFRIKRSTQL+KLMNAYC+RQSVD N+IAFLFDG Sbjct: 5 GEEDKKPAEGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDG 64
Query: 327 RRLRAEQTPAELEMEEGDEIDAMLHQTGGFSP 422 RRLR EQTP ELEME+GDEIDAMLHQTGG P Sbjct: 65 RRLRGEQTPDELEMEDGDEIDAMLHQTGGSVP 96
>tr|A5C9H9|A5C9H9_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_370, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00012332001 PE=4 SV=1 Length = 114
Score = 151 bits (382), Expect = 3e-35 Identities = 74/88 (84%), Positives = 83/88 (94%), Gaps = 2/88 (2%) Frame = +3
Query: 156 EDEKKPLDQ--HLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDGR 329 E++KKP+DQ H++LKVKGQDGNEVFFRIKRSTQLRKLM+AYC+RQSV+ NSIAFLFDGR Sbjct: 18 EEDKKPMDQGAHINLKVKGQDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLFDGR 77
Query: 330 RLRAEQTPAELEMEEGDEIDAMLHQTGG 413 RLR EQTP ELEME+GDEIDAMLHQTGG Sbjct: 78 RLRGEQTPDELEMEDGDEIDAMLHQTGG 105
>tr|A7PX89|A7PX89_VITVI Chromosome chr12 scaffold_36, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025945001 PE=4 SV=1 Length = 101
Score = 150 bits (380), Expect = 5e-35 Identities = 74/88 (84%), Positives = 82/88 (93%), Gaps = 2/88 (2%) Frame = +3
Query: 156 EDEKKPLDQ--HLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDGR 329 +++KKP DQ H++LKVKGQDGNEVFFRIKRSTQL+KLMNAYC+RQSVD NSIAFLFDGR Sbjct: 11 DEDKKPNDQSGHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 70
Query: 330 RLRAEQTPAELEMEEGDEIDAMLHQTGG 413 RLR EQTP ELEME+GDEIDAMLHQTGG Sbjct: 71 RLRGEQTPDELEMEDGDEIDAMLHQTGG 98
>tr|A7QZ01|A7QZ01_VITVI Chromosome undetermined scaffold_260, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010419001 PE=4 SV=1 Length = 103
Score = 150 bits (379), Expect = 6e-35 Identities = 74/88 (84%), Positives = 82/88 (93%), Gaps = 2/88 (2%) Frame = +3
Query: 156 EDEKKPLDQ--HLSLKVKGQDGNEVFFRIKRSTQLRKLMNAYCERQSVDPNSIAFLFDGR 329 E++KKP DQ H++LKVKGQDGNEVFFRIKRSTQLRKLM+AYC+RQSV+ NSIAFLFDGR Sbjct: 12 EEDKKPTDQGAHINLKVKGQDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLFDGR 71
Query: 330 RLRAEQTPAELEMEEGDEIDAMLHQTGG 413 RLR EQTP ELEME+GDEIDAMLHQTGG Sbjct: 72 RLRGEQTPDELEMEDGDEIDAMLHQTGG 99
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