| DK951209 |
| Clone id |
TST38A01NGRL0010_M15 |
| Library |
TST38 |
| Length |
620 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_M15. 5' end sequence. |
| Accession |
DK951209 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
- |
| Sequence |
GGCTTATGGGCCTTCCCATGTGTCTGCACCTGCGTCGGGCGGGATATCCAGTTACAGTGT
TCAACCGCACACGCATCATCTCCAGAGGCCTTGTGCGAGGAGGGCGCCACCTTTGCCCCA
TCACCGTTGGCTGTGGCACAGCGATCCGATGTGGTTTTCACCATGCTTACAAGTGCGCGT
GACGTTCGGCAAGTGATGCTTGGACCTGAGGGTGTATTGGAGGGCCTCCGTCCAGGGAGC
ATTGTGGTGGACAGCACTAGCAGTGAACCCTCCTTGGCCCGCGAACTCTTCGAACTTGGC
CTCTCCAAAGACATCCACTGTGTAGATGCGCCTGTCTCGGGTGGAGATGTGGGTGCCAAA
GAAGGAACCCTAGCTTTCCTGGCGGGGGGAGCTGCGGAGACTGTGAAGGCGTTGGAGCCA
TTGTTCAATTGCATGGGGAAAGTCACCCATTTGGGCCCGGCAGGCTCAGGACAAACTTGC
AAGCTTGCAAATCAGATCATGGTCGGTGCGAATTTGACTGGCTTGTCTGAGGGTCTGATC
TATGCAGAGAAGGCTGGCCTTGAACCCAACCTGTTTTTTGAGGCAGTTTCGGGAGGTGCT
GCCTGGATCCAAATCAATGG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O34948 |
| Definition |
sp|O34948|YKWC_BACSU Uncharacterized oxidoreductase ykwC OS=Bacillus subtilis |
| Align length |
174 |
| Score (bit) |
147.0 |
| E-value |
1.0e-36 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951209|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_M15, 5'
(620 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O34948|YKWC_BACSU Uncharacterized oxidoreductase ykwC OS=Baci... 147 1e-36
sp|P0ABQ2|GARR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Esch... 134 6e-32
sp|P0ABQ3|GARR_ECOL6 2-hydroxy-3-oxopropionate reductase OS=Esch... 134 6e-32
sp|P77161|GLXR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Esch... 121 3e-27
sp|Q54CX6|3HIDH_DICDI Probable 3-hydroxyisobutyrate dehydrogenas... 121 3e-27
sp|O33730|Y1503_SHEFN Uncharacterized oxidoreductase Sfri_1503 O... 119 1e-26
sp|Q99L13|3HIDH_MOUSE 3-hydroxyisobutyrate dehydrogenase, mitoch... 110 1e-24
sp|P29266|3HIDH_RAT 3-hydroxyisobutyrate dehydrogenase, mitochon... 109 5e-24
sp|Q55702|Y229_SYNY3 Uncharacterized oxidoreductase slr0229 OS=S... 107 5e-24
sp|P28811|MMSB_PSEAE 3-hydroxyisobutyrate dehydrogenase OS=Pseud... 110 8e-24
sp|Q2HJD7|3HIDH_BOVIN 3-hydroxyisobutyrate dehydrogenase, mitoch... 102 2e-22
sp|Q5R5E7|3HIDH_PONAB 3-hydroxyisobutyrate dehydrogenase, mitoch... 102 3e-22
sp|P31937|3HIDH_HUMAN 3-hydroxyisobutyrate dehydrogenase, mitoch... 102 3e-22
sp|Q9V8M5|3HIDH_DROME Probable 3-hydroxyisobutyrate dehydrogenas... 103 7e-22
sp|P63935|MMSB_MYCTU Probable 3-hydroxyisobutyrate dehydrogenase... 103 9e-22
sp|P63936|MMSB_MYCBO Probable 3-hydroxyisobutyrate dehydrogenase... 103 9e-22
sp|Q9SUC0|3HIDH_ARATH Probable 3-hydroxyisobutyrate dehydrogenas... 89 2e-18
sp|Q9XTI0|3HIDH_CAEEL Probable 3-hydroxyisobutyrate dehydrogenas... 89 2e-17
sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase ygbJ OS=Esch... 87 5e-17
sp|Q5RKN4|NP60_DANRE Nuclear protein NP60 OS=Danio rerio GN=np60... 87 7e-17
sp|P0A9V9|YIHU_SHIFL Uncharacterized oxidoreductase yihU OS=Shig... 86 2e-16
sp|P0A9V8|YIHU_ECOLI Uncharacterized oxidoreductase yihU OS=Esch... 86 2e-16
sp|Q562D5|NP60_XENTR Nuclear protein NP60 OS=Xenopus tropicalis ... 84 4e-16
sp|Q5RKH0|NP60_RAT Nuclear protein NP60 OS=Rattus norvegicus GN=... 84 8e-16
sp|Q49A26|NP60_HUMAN Nuclear protein NP60 OS=Homo sapiens GN=NP6... 84 8e-16
sp|Q5ZLS7|NP60_CHICK Nuclear protein NP60 OS=Gallus gallus GN=NP... 84 8e-16
sp|A4FUF0|NP60_BOVIN Nuclear protein NP60 OS=Bos taurus GN=NP60 ... 84 8e-16
sp|Q922P9|NP60_MOUSE Nuclear protein NP60 OS=Mus musculus GN=Np6... 83 1e-15
sp|Q5R7T2|NP60_PONAB Nuclear protein NP60 OS=Pongo abelii GN=NP6... 80 6e-15
sp|Q9L7S0|YIHU_SALTY Uncharacterized oxidoreductase yihU OS=Salm... 80 1e-14
>sp|O34948|YKWC_BACSU Uncharacterized oxidoreductase ykwC
OS=Bacillus subtilis GN=ykwC PE=3 SV=1
Length = 288
Score = 147 bits (370), Expect(2) = 1e-36
Identities = 69/174 (39%), Positives = 116/174 (66%), Gaps = 1/174 (0%)
Frame = +1
Query: 85 EALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDSTSS 264
E++ ++GA + + +++ +DV+ TM+ DV +V G G++E + G+ ++D T+S
Sbjct: 39 ESILQKGAIWKDTVKDLSKEADVIITMVGYPSDVEEVYFGSNGIIENAKEGAYLIDMTTS 98
Query: 265 EPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCMGK- 441
+PSLA+++ E K + +DAPVSGGD+GA+ GTLA + GG E +A P+F+ MG+
Sbjct: 99 KPSLAKKIAEAAKEKALFALDAPVSGGDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGEN 158
Query: 442 VTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
+ + GPAGSGQ K+ NQI + A + G++E + YA+K+GLEP ++++ GAA
Sbjct: 159 IQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLEPENVLKSITTGAA 212
Score = 26.9 bits (58), Expect(2) = 1e-36
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNRTRIISRGLVRGG 104
+MG M H+ G+PV V+ RT+ + +++ G
Sbjct: 12 VMGKSMASHILNDGHPVLVYTRTKEKAESILQKG 45
>sp|P0ABQ2|GARR_ECOLI 2-hydroxy-3-oxopropionate reductase
OS=Escherichia coli (strain K12) GN=garR PE=1 SV=1
Length = 294
Score = 134 bits (337), Expect(2) = 6e-32
Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 4/179 (2%)
Frame = +1
Query: 79 SPEALCE---EGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVV 249
+PEA+ + GA A + A+A++ DV+ TML ++ V++V LG G++EG +PG++++
Sbjct: 32 NPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLI 91
Query: 250 DSTSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFN 429
D +S P +RE+ E +K I +DAPVSGG+ A +GTL+ + GG L
Sbjct: 92 DMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMK 151
Query: 430 CM-GKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
M G V H G G+G KLANQ++V N+ +SE L A KAG+ P+L ++A+ GG A
Sbjct: 152 AMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLA 210
Score = 23.9 bits (50), Expect(2) = 6e-32
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNR 68
+MG PM +L +AGY + V +R
Sbjct: 10 IMGKPMSKNLLKAGYSLVVADR 31
>sp|P0ABQ3|GARR_ECOL6 2-hydroxy-3-oxopropionate reductase
OS=Escherichia coli O6 GN=garR PE=3 SV=1
Length = 294
Score = 134 bits (337), Expect(2) = 6e-32
Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 4/179 (2%)
Frame = +1
Query: 79 SPEALCE---EGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVV 249
+PEA+ + GA A + A+A++ DV+ TML ++ V++V LG G++EG +PG++++
Sbjct: 32 NPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLI 91
Query: 250 DSTSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFN 429
D +S P +RE+ E +K I +DAPVSGG+ A +GTL+ + GG L
Sbjct: 92 DMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMK 151
Query: 430 CM-GKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
M G V H G G+G KLANQ++V N+ +SE L A KAG+ P+L ++A+ GG A
Sbjct: 152 AMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLA 210
Score = 23.9 bits (50), Expect(2) = 6e-32
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNR 68
+MG PM +L +AGY + V +R
Sbjct: 10 IMGKPMSKNLLKAGYSLVVADR 31
>sp|P77161|GLXR_ECOLI 2-hydroxy-3-oxopropionate reductase
OS=Escherichia coli (strain K12) GN=glxR PE=2 SV=1
Length = 292
Score = 121 bits (303), Expect = 3e-27
Identities = 74/206 (35%), Positives = 110/206 (53%), Gaps = 5/206 (2%)
Frame = +1
Query: 1 GLWAFPCVCTCVGRDIQLQCSTAHASSPEALCEEGATFAPSPLAVAQRSDVVFTMLTSAR 180
G+ P QL +T + E L GA + V + SD++F M+
Sbjct: 9 GIMGTPMAINLARAGHQLHVTTIGPVADELL-SLGAVSVETARQVTEASDIIFIMVPDTP 67
Query: 181 DVRQVMLGPEGVLEGLRPGSIVVDSTSSEP----SLARELFELGLSKDIHCVDAPVSGGD 348
V +V+ G G + G +VD +S P AR++ ELG +DAPVSGG+
Sbjct: 68 QVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDY----LDAPVSGGE 123
Query: 349 VGAKEGTLAFLAGGAAETVKALEPLFNCMGK-VTHLGPAGSGQTCKLANQIMVGANLTGL 525
+GA+EGTL+ + GG + ++PLF +GK +T +G G GQTCK+ANQI+V N+ +
Sbjct: 124 IGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAV 183
Query: 526 SEGLIYAEKAGLEPNLFFEAVSGGAA 603
SE L++A KAG +P +A+ GG A
Sbjct: 184 SEALLFASKAGADPVRVRQALMGGFA 209
>sp|Q54CX6|3HIDH_DICDI Probable 3-hydroxyisobutyrate dehydrogenase,
mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3
SV=1
Length = 321
Score = 121 bits (303), Expect = 3e-27
Identities = 58/160 (36%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Frame = +1
Query: 91 LCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDSTSSEP 270
L E+GA A SP VA+ +DV+ TML ++ V+ V G G+ + +RPG++++DS++ +P
Sbjct: 61 LKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDP 120
Query: 271 SLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCMGK-VT 447
+ ARE+ + +D PVSGG GA+ GTL F+ GG+ + + CMGK +
Sbjct: 121 ATAREVASIAKKHQSTMLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNIV 180
Query: 448 HLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEP 567
H G G+GQ K+ N +++G ++ +SE + K G++P
Sbjct: 181 HCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMDP 220
>sp|O33730|Y1503_SHEFN Uncharacterized oxidoreductase Sfri_1503
OS=Shewanella frigidimarina (strain NCIMB 400)
GN=Sfri_1503 PE=3 SV=2
Length = 291
Score = 119 bits (299), Expect = 1e-26
Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 3/204 (1%)
Frame = +1
Query: 1 GLWAFPCVCTCV--GRDIQLQCSTAHASSPEALCEEGATFAPSPLAVAQRSDVVFTMLTS 174
G+ FP V G D+ + T A + + + + G A +P AQ D+VFT + +
Sbjct: 10 GVMGFPMAGHLVKQGHDVTVYNRTG-AKATQWVEQYGGKKADTPKDAAQGQDIVFTCVGN 68
Query: 175 ARDVRQVMLGPEGVLEGLRPGSIVVDSTSSEPSLARELFELGLSKDIHCVDAPVSGGDVG 354
D+RQV+LG G++ G+ G+I+VD T++ +ARE+ +I +DAPVSGG G
Sbjct: 69 DDDLRQVVLGEHGIVHGMHAGAILVDHTTASADVAREIAAYIEPLNIAFLDAPVSGGQAG 128
Query: 355 AKEGTLAFLAGGAAETVKALEPLFNCMGKVTH-LGPAGSGQTCKLANQIMVGANLTGLSE 531
A+ G L + GG ++P+ + + LGP G+GQ K+ NQI + + GL+E
Sbjct: 129 AENGALTVMMGGDQAHFDTVKPVISAYSRCAELLGPVGAGQLTKMVNQICIAGVVQGLAE 188
Query: 532 GLIYAEKAGLEPNLFFEAVSGGAA 603
GL +A+ AGL+ E +S GAA
Sbjct: 189 GLHFAKSAGLDGLKVIEVISKGAA 212
>sp|Q99L13|3HIDH_MOUSE 3-hydroxyisobutyrate dehydrogenase,
mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1
Length = 335
Score = 110 bits (276), Expect(2) = 1e-24
Identities = 58/173 (33%), Positives = 100/173 (57%), Gaps = 3/173 (1%)
Frame = +1
Query: 97 EEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDSTSSEPSL 276
E G A SP VA+++D + TML S+ + +V G G+L+ ++ GS+++DS++ +PS+
Sbjct: 79 EAGEQVASSPAEVAEKADRIITMLPSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSV 138
Query: 277 ARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCMG-KVTHL 453
++EL + +DAPVSGG A+ G L F+ GG + A + L CMG V +
Sbjct: 139 SKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYC 198
Query: 454 GPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEA--VSGGAAW 606
G G+GQ+ K+ N +++ ++ G +E + ++GL+P L + +S G W
Sbjct: 199 GAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRCW 251
Score = 22.7 bits (47), Expect(2) = 1e-24
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 6 MGLPMCLHLRRAGYPVTVFN 65
MG PM +L + GYP+ +++
Sbjct: 49 MGNPMAKNLMKHGYPLILYD 68
>sp|P29266|3HIDH_RAT 3-hydroxyisobutyrate dehydrogenase,
mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3
Length = 335
Score = 109 bits (273), Expect(2) = 5e-24
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 3/173 (1%)
Frame = +1
Query: 97 EEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDSTSSEPSL 276
E G A SP VA+++D + TML S+ + +V G G+L+ ++ GS+++DS++ +PS+
Sbjct: 79 EAGEQVASSPADVAEKADRIITMLPSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSV 138
Query: 277 ARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCMG-KVTHL 453
++EL + +DAPVSGG A+ G L F+ GG A + L CMG V +
Sbjct: 139 SKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYC 198
Query: 454 GPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEA--VSGGAAW 606
G GSGQ+ K+ N +++ ++ G +E + ++GL+P L + +S G W
Sbjct: 199 GAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRCW 251
Score = 21.9 bits (45), Expect(2) = 5e-24
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 6 MGLPMCLHLRRAGYPVTVFN 65
MG PM +L + GYP+ +++
Sbjct: 49 MGNPMAKNLIKHGYPLILYD 68
>sp|Q55702|Y229_SYNY3 Uncharacterized oxidoreductase slr0229
OS=Synechocystis sp. (strain PCC 6803) GN=slr0229 PE=3
SV=1
Length = 290
Score = 107 bits (268), Expect(2) = 5e-24
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Frame = +1
Query: 64 TAHASSPEALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSI 243
T S + + G S A +D++ T + +DV+Q++LG G+ E +P ++
Sbjct: 35 TLERPSVQEAAKAGVKVVTSIAVAAANADIILTCVGDEKDVQQLILGSGGIAEYAKPQAL 94
Query: 244 VVDSTSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPL 423
++D ++ + A EL + + +DAPV+GGDVGA GTL + GG + P+
Sbjct: 95 IIDCSTIGKTAAYELATNLKLQGLRFLDAPVTGGDVGAINGTLTIMVGGDISDFEEALPV 154
Query: 424 FNCMG-KVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGA 600
+G K+ H GP+GSGQ KL NQ++ G + +E + +E+ G+ P L + GA
Sbjct: 155 LKSIGEKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQLGIAPELVIDTCGSGA 214
Query: 601 A 603
A
Sbjct: 215 A 215
Score = 23.9 bits (50), Expect(2) = 5e-24
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNRT 71
+MG PM +L + GY +NRT
Sbjct: 13 VMGSPMAQNLVKNGYQTVGYNRT 35
>sp|P28811|MMSB_PSEAE 3-hydroxyisobutyrate dehydrogenase
OS=Pseudomonas aeruginosa GN=mmsB PE=2 SV=1
Length = 298
Score = 110 bits (274), Expect = 8e-24
Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 3/175 (1%)
Frame = +1
Query: 91 LCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDSTSSEP 270
L E+GA A S L + ++VV +ML + + V + LG +G+L + +++D ++ P
Sbjct: 40 LVEQGAQGADSALQCCEGAEVVISMLPAGQHVESLYLGDDGLLARVAGKPLLIDCSTIAP 99
Query: 271 SLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCMGK-VT 447
AR++ E +K + +DAPVSGG GA+ GTL+F+ GG AE P+ MG+ +
Sbjct: 100 ETARKVAEAAAAKGLTLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIF 159
Query: 448 HLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAV--SGGAAW 606
H G G+GQ K+ N +++G + G +E L K GL+P + E + S G W
Sbjct: 160 HAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEVMKQSSGGNW 214
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9SA83 |
| Definition |
tr|A9SA83|A9SA83_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
| Align length |
176 |
| Score (bit) |
205.0 |
| E-value |
2.0e-51 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951209|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_M15, 5'
(620 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SA83|A9SA83_PHYPA Predicted protein (Fragment) OS=Physcomit... 205 2e-51
tr|A9NZ37|A9NZ37_PICSI Putative uncharacterized protein OS=Picea... 189 3e-50
tr|A7PYN7|A7PYN7_VITVI Chromosome chr12 scaffold_38, whole genom... 194 5e-48
tr|Q9C991|Q9C991_ARATH Putative dehydrogenase; 55429-56328 (Dehy... 178 5e-45
tr|Q949M8|Q949M8_ARATH Putative dehydrogenase OS=Arabidopsis tha... 174 3e-43
tr|Q9C990|Q9C990_ARATH Putative dehydrogenase; 57154-58047 OS=Ar... 174 3e-43
tr|Q9SZE1|Q9SZE1_ARATH Putative uncharacterized protein F19B15.1... 177 4e-43
tr|B6TZU3|B6TZU3_MAIZE Putative uncharacterized protein OS=Zea m... 174 5e-42
tr|Q0DFX0|Q0DFX0_ORYSJ Os05g0565500 protein OS=Oryza sativa subs... 172 1e-41
tr|B8AWR9|B8AWR9_ORYSI Putative uncharacterized protein OS=Oryza... 172 1e-41
tr|B7FA93|B7FA93_ORYSJ cDNA, clone: J100058A22, full insert sequ... 172 1e-41
tr|Q88UE9|Q88UE9_LACPL 3-hydroxyisobutyrate dehydrogenase OS=Lac... 171 3e-41
tr|A7PEG7|A7PEG7_VITVI Chromosome chr11 scaffold_13, whole genom... 169 2e-40
tr|Q1EPJ1|Q1EPJ1_MUSAC 6-phosphogluconate dehydrogenase NAD-bind... 166 8e-40
tr|A3ZMK4|A3ZMK4_9PLAN 3-hydroxyisobutyrate dehydrogenase OS=Bla... 153 1e-39
tr|B7YFF1|B7YFF1_9BACI 6-phosphogluconate dehydrogenase NAD-bind... 152 2e-39
tr|Q1AVA4|Q1AVA4_RUBXD 2-hydroxy-3-oxopropionate reductase OS=Ru... 155 2e-39
tr|Q1AS64|Q1AS64_RUBXD 2-hydroxy-3-oxopropionate reductase OS=Ru... 154 5e-39
tr|A7Z409|A7Z409_BACA2 YkwC OS=Bacillus amyloliquefaciens (strai... 154 8e-39
tr|Q92D17|Q92D17_LISIN Lin1004 protein OS=Listeria innocua GN=li... 156 1e-38
tr|Q2B5F4|Q2B5F4_9BACI YkwC OS=Bacillus sp. NRRL B-14911 GN=B149... 162 2e-38
tr|Q5L168|Q5L168_GEOKA 3-hydroxyisobutyrate dehydrogenase OS=Geo... 152 3e-38
tr|A0LMG6|A0LMG6_SYNFM 3-hydroxyisobutyrate dehydrogenase OS=Syn... 161 3e-38
tr|Q8LQ70|Q8LQ70_ORYSJ Putative D-threonine dehydrogenase (Os01g... 160 4e-38
tr|A2WUX7|A2WUX7_ORYSI Putative uncharacterized protein OS=Oryza... 160 4e-38
tr|A6C7B9|A6C7B9_9PLAN 3-hydroxyisobutyrate dehydrogenase OS=Pla... 160 6e-38
tr|B8DSA9|B8DSA9_DESVM 2-hydroxy-3-oxopropionate reductase OS=De... 148 1e-37
tr|Q585Q3|Q585Q3_9TRYP 2-hydroxy-3-oxopropionate reductase, puta... 159 2e-37
tr|A4ILR3|A4ILR3_GEOTN 3-hydroxyisobutyrate dehydrogenase OS=Geo... 149 4e-37
tr|A4BHZ8|A4BHZ8_9GAMM Putative 3-hydroxyisobutyrate dehydrogena... 142 4e-37
>tr|A9SA83|A9SA83_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_126629 PE=4 SV=1
Length = 292
Score = 205 bits (522), Expect = 2e-51
Identities = 100/176 (56%), Positives = 128/176 (72%)
Frame = +1
Query: 76 SSPEALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDS 255
S E LC++GA A SP AVA+ SDVVF ++ DVR+V+LG +G+L+ LRPG IVVD
Sbjct: 30 SKAEGLCQKGAVMADSPSAVAENSDVVFMIVGYPADVREVILGEKGILQTLRPGGIVVDM 89
Query: 256 TSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCM 435
T+SEPSLARE+F+ + VDAPVSGGD GAK GTLA +AGG ET+ L PLF CM
Sbjct: 90 TTSEPSLAREIFDAAQKRGCDAVDAPVSGGDKGAKAGTLAIMAGGRKETISTLGPLFMCM 149
Query: 436 GKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
G T +GPAG GQ+CKLANQ+ + + + GL EG++YA KAGL+ F +A++GGAA
Sbjct: 150 GTPTFMGPAGCGQSCKLANQVTIASTMVGLVEGMMYAHKAGLDVTTFLQAIAGGAA 205
Score = 34.3 bits (77), Expect = 6.1
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNRTRIISRGLVRGG 104
+MG MC H+ AG+ VTV+NRT + GL + G
Sbjct: 6 VMGQAMCGHILDAGFAVTVYNRTPSKAEGLCQKG 39
>tr|A9NZ37|A9NZ37_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 300
Score = 189 bits (479), Expect(2) = 3e-50
Identities = 91/176 (51%), Positives = 122/176 (69%)
Frame = +1
Query: 76 SSPEALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDS 255
S + LC+ GA SP +VA SD+VFT++ +DVR+V++G GVL+GL+PG VVD
Sbjct: 39 SKAQTLCDRGAIMVDSPKSVAAESDIVFTIVGYPQDVREVIIGENGVLQGLKPGGTVVDM 98
Query: 256 TSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCM 435
T+SEPSLARE+ + + VDAPVSGGD GAK G LA AGG V+ L+PLF+CM
Sbjct: 99 TTSEPSLAREIIDYAKQRGCESVDAPVSGGDKGAKAGALAIFAGGEETVVEGLKPLFDCM 158
Query: 436 GKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
GKVT++G G GQ KL NQI + + + GL EG++YA KAGL+ ++ +A+S GAA
Sbjct: 159 GKVTYMGGPGLGQCTKLGNQITIASTMVGLVEGMVYAHKAGLDVEMYIKAISAGAA 214
Score = 34.3 bits (77), Expect(2) = 3e-50
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNRT 71
+MG MC H+ AGY VTVFNRT
Sbjct: 15 VMGQAMCGHILSAGYSVTVFNRT 37
>tr|A7PYN7|A7PYN7_VITVI Chromosome chr12 scaffold_38, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00026517001
PE=4 SV=1
Length = 305
Score = 194 bits (492), Expect = 5e-48
Identities = 96/183 (52%), Positives = 132/183 (72%), Gaps = 3/183 (1%)
Frame = +1
Query: 64 TAHASSPE---ALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRP 234
T +A +P L +GA A SP ++A++SDVVFTML DVRQ++LGP G+L GL P
Sbjct: 40 TVYARNPSKALTLQSQGAQLADSPASLARQSDVVFTMLGHPSDVRQIVLGPNGILSGLNP 99
Query: 235 GSIVVDSTSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKAL 414
G ++VD+TSS P LARE++ K+ VD+PVSGGD+GA++G LA LAGG + V+ L
Sbjct: 100 GGVLVDTTSSHPGLAREIYAAAREKNCWSVDSPVSGGDIGARDGKLAILAGGDSGVVEWL 159
Query: 415 EPLFNCMGKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSG 594
PL+N MGK T++G G G +CK+ANQ++V AN+ GLSEGL++AE+AGL+ + +AV G
Sbjct: 160 TPLYNVMGKGTYVGAPGCGMSCKIANQMIVAANMLGLSEGLVFAERAGLDKQQWMDAVRG 219
Query: 595 GAA 603
GAA
Sbjct: 220 GAA 222
>tr|Q9C991|Q9C991_ARATH Putative dehydrogenase; 55429-56328
(Dehydrogenase like protein) OS=Arabidopsis thaliana
GN=At1g71170 PE=2 SV=1
Length = 299
Score = 178 bits (452), Expect(2) = 5e-45
Identities = 88/168 (52%), Positives = 119/168 (70%)
Frame = +1
Query: 100 EGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDSTSSEPSLA 279
+G A SP + + SDVVFT++ ++ DVR ++LG +GVL GL+PG + VD TSS+P LA
Sbjct: 55 KGGRTANSPKELGEMSDVVFTIVGNSNDVRSLLLGDDGVLSGLKPGGVTVDMTSSKPGLA 114
Query: 280 RELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCMGKVTHLGP 459
RE++ +D VDAPVSGGD GA+EG L AGG +E V+ L P+ MG V +G
Sbjct: 115 REIYAEARRRDCWAVDAPVSGGDAGAREGKLTIFAGGDSEIVEWLAPVMKTMGIVRFMGG 174
Query: 460 AGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
AGSGQ+CK+ NQI VG+N+ GL+EG+++AEKAGL+P + EAV GAA
Sbjct: 175 AGSGQSCKIGNQICVGSNMIGLAEGIVFAEKAGLDPVKWLEAVKDGAA 222
Score = 26.9 bits (58), Expect(2) = 5e-45
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNRTRIISRGL-VRGGR 107
+MG M H+ AGY VTV+ R ++ L +GGR
Sbjct: 23 IMGSAMVSHILAAGYSVTVYARDLRKTKDLQTKGGR 58
>tr|Q949M8|Q949M8_ARATH Putative dehydrogenase OS=Arabidopsis
thaliana GN=At1g71180 PE=2 SV=1
Length = 318
Score = 174 bits (442), Expect(2) = 3e-43
Identities = 88/168 (52%), Positives = 118/168 (70%)
Frame = +1
Query: 100 EGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDSTSSEPSLA 279
+GA A SP +A+ SDVVFT++ + DVR ++LG +GVL GL PG + VD TSS+P LA
Sbjct: 76 KGARIANSPKELAEMSDVVFTIVGNFNDVRSLLLGDDGVLSGLTPGGVTVDMTSSKPGLA 135
Query: 280 RELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCMGKVTHLGP 459
RE+ ++ VDAPVSGGD GA+EGTL AGG +E V+ L P+ +G VT++G
Sbjct: 136 REIHAEARRRNCWAVDAPVSGGDAGAREGTLGIFAGGDSEIVEWLSPVMKNIGTVTYMGE 195
Query: 460 AGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
AGSGQ+CK+ NQI +NL GL+EG+++AEKAGL+ + EAV GAA
Sbjct: 196 AGSGQSCKIGNQIAGASNLVGLAEGIVFAEKAGLDTVKWLEAVKDGAA 243
Score = 25.0 bits (53), Expect(2) = 3e-43
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNR 68
+MG M H+ AGY VTV+ R
Sbjct: 44 IMGSAMVSHIIAAGYSVTVYAR 65
>tr|Q9C990|Q9C990_ARATH Putative dehydrogenase; 57154-58047
OS=Arabidopsis thaliana GN=F23N20.17 PE=4 SV=1
Length = 297
Score = 174 bits (442), Expect(2) = 3e-43
Identities = 88/168 (52%), Positives = 118/168 (70%)
Frame = +1
Query: 100 EGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPEGVLEGLRPGSIVVDSTSSEPSLA 279
+GA A SP +A+ SDVVFT++ + DVR ++LG +GVL GL PG + VD TSS+P LA
Sbjct: 55 KGARIANSPKELAEMSDVVFTIVGNFNDVRSLLLGDDGVLSGLTPGGVTVDMTSSKPGLA 114
Query: 280 RELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNCMGKVTHLGP 459
RE+ ++ VDAPVSGGD GA+EGTL AGG +E V+ L P+ +G VT++G
Sbjct: 115 REIHAEARRRNCWAVDAPVSGGDAGAREGTLGIFAGGDSEIVEWLSPVMKNIGTVTYMGE 174
Query: 460 AGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
AGSGQ+CK+ NQI +NL GL+EG+++AEKAGL+ + EAV GAA
Sbjct: 175 AGSGQSCKIGNQIAGASNLVGLAEGIVFAEKAGLDTVKWLEAVKDGAA 222
Score = 25.0 bits (53), Expect(2) = 3e-43
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNR 68
+MG M H+ AGY VTV+ R
Sbjct: 23 IMGSAMVSHIIAAGYSVTVYAR 44
>tr|Q9SZE1|Q9SZE1_ARATH Putative uncharacterized protein F19B15.150
(Putative uncharacterized protein At4g29120)
OS=Arabidopsis thaliana GN=F19B15.150 PE=2 SV=1
Length = 334
Score = 177 bits (449), Expect = 4e-43
Identities = 94/177 (53%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +1
Query: 76 SSPEALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPE-GVLEGLRPGSIVVD 252
S + L + GA A SP +VA++SDVVFT++ DVR V+L P+ G L GLR G ++VD
Sbjct: 71 SKAQTLIDMGANVADSPNSVAEQSDVVFTIVGYPSDVRHVLLDPKSGALSGLRQGGVLVD 130
Query: 253 STSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKALEPLFNC 432
T+SEPSLA E+ + K+ +DAPVSGGD+GAK G L+ AGG TVK L+PLF+
Sbjct: 131 MTTSEPSLAEEIAKAASFKNCFSIDAPVSGGDLGAKNGKLSIFAGGDETTVKRLDPLFSL 190
Query: 433 MGKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVSGGAA 603
MGKV +G +G GQ KLANQI + + + GL EGLIYA KAGL+ F EA+S GAA
Sbjct: 191 MGKVNFMGTSGKGQFAKLANQITIASTMLGLVEGLIYAHKAGLDVKKFLEAISTGAA 247
Score = 36.2 bits (82), Expect = 1.6
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 3 LMGLPMCLHLRRAGYPVTVFNRTRIISRGLVRGGRHL 113
+MG MC HL +AGY VTVFNRT ++ L+ G ++
Sbjct: 47 VMGRSMCGHLIKAGYTVTVFNRTISKAQTLIDMGANV 83
>tr|B6TZU3|B6TZU3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 317
Score = 174 bits (440), Expect = 5e-42
Identities = 97/188 (51%), Positives = 122/188 (64%), Gaps = 4/188 (2%)
Frame = +1
Query: 64 TAHASSP---EALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVMLGPE-GVLEGLR 231
TA+A +P E+L GA+ A SP AVA SDVVFTM+ + DVR V+L P G L GLR
Sbjct: 49 TAYARTPSRAESLVAAGASLADSPAAVAAASDVVFTMVGNPGDVRAVVLDPAAGALAGLR 108
Query: 232 PGSIVVDSTSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKA 411
G ++VD TSS PSLARE+ + H VDAPVSGGDVGA++GTLA AGG V
Sbjct: 109 RGGVLVDCTSSSPSLAREVAAAAAAAGCHAVDAPVSGGDVGARDGTLAVFAGGDEAVVAW 168
Query: 412 LEPLFNCMGKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVS 591
L PLF +G+ T +G GSGQ+ K+ANQ+ V + GL E + +A AGL+ LF AVS
Sbjct: 169 LAPLFASLGRATRMGAPGSGQSSKIANQVAVAGAVVGLGEAVSFARAAGLDAPLFLGAVS 228
Query: 592 GGAAWIQI 615
GAAW ++
Sbjct: 229 RGAAWSRV 236
>tr|Q0DFX0|Q0DFX0_ORYSJ Os05g0565500 protein OS=Oryza sativa subsp.
japonica GN=Os05g0565500 PE=4 SV=1
Length = 280
Score = 172 bits (436), Expect = 1e-41
Identities = 98/184 (53%), Positives = 122/184 (66%), Gaps = 4/184 (2%)
Frame = +1
Query: 64 TAHASSP---EALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVML-GPEGVLEGLR 231
TA+A +P EAL GA+ A SP AVA DVVFTM+ + DVR V+L GVL GLR
Sbjct: 13 TAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVVLDAASGVLAGLR 72
Query: 232 PGSIVVDSTSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKA 411
PG ++VD TSS PSLARE+ + + VD+PVSGGDVGA++G LA LAGG V
Sbjct: 73 PGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALALLAGGDEAVVSW 132
Query: 412 LEPLFNCMGKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVS 591
L PLF +G+ T++GP GSGQ+ K+ANQI V + G SE L +A AGL+ LF +AVS
Sbjct: 133 LAPLFAHLGRPTYMGPPGSGQSSKIANQIAVAGAVVGASEALAFANAAGLDAPLFLDAVS 192
Query: 592 GGAA 603
GAA
Sbjct: 193 KGAA 196
>tr|B8AWR9|B8AWR9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21005 PE=4 SV=1
Length = 312
Score = 172 bits (436), Expect = 1e-41
Identities = 98/184 (53%), Positives = 122/184 (66%), Gaps = 4/184 (2%)
Frame = +1
Query: 64 TAHASSP---EALCEEGATFAPSPLAVAQRSDVVFTMLTSARDVRQVML-GPEGVLEGLR 231
TA+A +P EAL GA+ A SP AVA DVVFTM+ + DVR V+L GVL GLR
Sbjct: 45 TAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVVLDAASGVLAGLR 104
Query: 232 PGSIVVDSTSSEPSLARELFELGLSKDIHCVDAPVSGGDVGAKEGTLAFLAGGAAETVKA 411
PG ++VD TSS PSLARE+ + + VD+PVSGGDVGA++G LA LAGG V
Sbjct: 105 PGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALALLAGGDEAVVSW 164
Query: 412 LEPLFNCMGKVTHLGPAGSGQTCKLANQIMVGANLTGLSEGLIYAEKAGLEPNLFFEAVS 591
L PLF +G+ T++GP GSGQ+ K+ANQI V + G SE L +A AGL+ LF +AVS
Sbjct: 165 LAPLFAHLGRPTYMGPPGSGQSSKIANQIAVAGAVVGASEALAFANAAGLDAPLFLDAVS 224
Query: 592 GGAA 603
GAA
Sbjct: 225 KGAA 228
|