DK951220
Clone id TST38A01NGRL0010_N02
Library
Length 642
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_N02. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CTTCTTTTCGGGACAACGGCCCGCCCTTTGGTGAGTCTGTGGCCAAGCTGTATGTTGGGA
ACCTGCCATGGAGCTGCAACAGCGAAGAACTTGCTGGCGTTTTTCAGAAAGTGGGCAGCG
TAGACATGGTTGAGGTTATTTATGACAAAGAGTCTGGCAGGAGTCGTGGTTTTGGGTTTG
TCACTATGAGCTCTGTAGAGGACTGTAATACTGCCATTGAGAAGCTAGACGGGGCTGATT
ATGCTGGAAGGACATTGCGAGTGAATTTTCCCAACCGTAACAGAGGAGATGCTCCTACCC
CTCGTGCTCCAAGAATGGACCAAAACAATTCCAACAAGTTGTTCGTTGGAAACTTGGCCT
GGGGAGTTGATGATGGTATGCTACATGATCTGTTCAGCGAGCACGGAAAAGTGCTGGAGG
CCAGAGTTGTCAATGATCGGGAAACTGGGCGGTCTCGTGGCTTTGGTTTTGTTACCATGT
CTACTGAGGCTGAAGTCAATCAAGCTTTGAACAAAATGGATGGAGCGGCTATTGAAGGGA
GGAATCTGCGCGTGAACATGGCTGGCGAAAGACCTTCCTCTAGATCCGATTTCTTCTAGA
AAAATTGCCCGTTGGGGTTTGAACTTGAGACCATCTCCTCTA
■■Homology search results ■■ -
sp_hit_id P28644
Definition sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea
Align length 190
Score (bit) 199.0
E-value 1.0e-50
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951220|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_N02, 5'
(642 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 199 1e-50
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 192 2e-48
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 186 7e-47
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 186 7e-47
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 183 8e-46
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 179 1e-44
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 177 5e-44
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 176 1e-43
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 173 6e-43
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 155 2e-37
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 149 2e-35
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 106 9e-23
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 105 2e-22
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 100 6e-21
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 100 6e-21
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 99 2e-20
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 97 5e-20
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05... 96 2e-19
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15... 95 4e-19
sp|O74400|YOCE_SCHPO Uncharacterized RNA-binding protein C4F6.14... 94 5e-19
sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic ... 94 5e-19
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ... 92 2e-18
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 92 3e-18
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 92 3e-18
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 91 5e-18
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido... 91 5e-18
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ... 91 7e-18
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ... 89 1e-17
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ... 89 1e-17
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ... 89 3e-17

>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 233

Score = 199 bits (505), Expect = 1e-50
Identities = 105/190 (55%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Frame = +3

Query: 12 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 185
+ G F E AKL+VGNLP+ +SE+LAG+F G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43 EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 186 MSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWG 365
MS+VE+ A+E L+G D GR L VN + RAPR D S +++VGNL W
Sbjct: 103 MSTVEEAEKAVELLNGYDMDGRQLTVN---KAAPRGSPERAPRGDFEPSCRVYVGNLPWD 159

Query: 366 VDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRN 545
VD L LFSEHGKV+ ARVV+DRETGRSRGFGFVTMS+E+EVN A+ +DG ++GR
Sbjct: 160 VDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRA 219

Query: 546 LRVNMAGERP 575
+RVN+A ERP
Sbjct: 220 VRVNVAEERP 229



Score = 75.1 bits (183), Expect = 3e-13
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +3

Query: 336 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 515
KLFVGNL + VD L +F G V A V+ +RET RSRGFGFVTMST E +A+
Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115

Query: 516 MDGAAIEGRNLRVNMAGERPS----SRSDF 593
++G ++GR L VN A R S R DF
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPERAPRGDF 145


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
Length = 329

Score = 192 bits (487), Expect = 2e-48
Identities = 102/181 (56%), Positives = 135/181 (74%)
Frame = +3

Query: 42 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 221
AKL+VGNL + NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++ TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 222 KLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSE 401
K + D GR L VN RG P RAPR+ + + +++VGNL W VD+G L LFSE
Sbjct: 210 KFNRYDLNGRLLTVN-KAAPRGSRPE-RAPRVYEP-AFRVYVGNLPWDVDNGRLEQLFSE 266

Query: 402 HGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSS 581
HGKV+EARVV DRETGRSRGFGFVTMS E+N+A++ +DG +EGR +RVN+A ERP
Sbjct: 267 HGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

Query: 582 R 584
R
Sbjct: 327 R 327



Score = 87.0 bits (214), Expect = 7e-17
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +3

Query: 12 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 191
+ P E ++YVGNLPW ++ L +F + G V V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 192 SVEDCNTAIEKLDGADYAGRTLRVN 266
V++ N AI LDG + GR +RVN
Sbjct: 294 DVDELNEAISALDGQNLEGRAIRVN 318



Score = 72.0 bits (175), Expect = 2e-12
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Frame = +3

Query: 168 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPRMDQNN 329
G G V + E+ + + +G + G V+ + + GD A + RA + +
Sbjct: 89 GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 148

Query: 330 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 509
KLFVGNLA+ V+ L LF + G V A V+ +RET +SRGFGFVTMS+ E A+
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208

Query: 510 NKMDGAAIEGRNLRVNMAGERPS 578
K + + GR L VN A R S
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGS 231


>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 315

Score = 186 bits (473), Expect = 7e-47
Identities = 98/184 (53%), Positives = 136/184 (73%)
Frame = +3

Query: 42 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 221
AKL+VGNLP+ +SE LA +F++ G V++ EVIY++++ +SRGFGFVTMS+VE+ A+E
Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 195

Query: 222 KLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSE 401
+ D GR L VN R RG+ P R PR + S +++VGN+ WG+DD L LFSE
Sbjct: 196 MYNRYDVNGRLLTVNKAAR-RGERPE-RPPRTFEQ-SYRIYVGNIPWGIDDARLEQLFSE 252

Query: 402 HGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSS 581
HGKV+ ARVV DRETGRSRGFGFVTM++EAE++ A+ +DG +++GR +RVN+A +R S
Sbjct: 253 HGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR-SR 311

Query: 582 RSDF 593
R+ F
Sbjct: 312 RNTF 315



Score = 81.6 bits (200), Expect = 3e-15
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +3

Query: 33 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 212
E ++YVGN+PW + L +F + G V V+YD+E+GRSRGFGFVTM+S + +
Sbjct: 227 EQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSD 286

Query: 213 AIEKLDGADYAGRTLRVN 266
AI LDG GRT+RVN
Sbjct: 287 AIANLDGQSLDGRTIRVN 304


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 276

Score = 186 bits (473), Expect = 7e-47
Identities = 98/178 (55%), Positives = 130/178 (73%)
Frame = +3

Query: 42 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 221
AKL+VGNLP+ +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97 AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156

Query: 222 KLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSE 401
D GR L VN RG P RAPR Q + +++VGN+ W +DD L +FSE
Sbjct: 157 LYSQYDLNGRLLTVN-KAAPRGSRPE-RAPRTFQP-TYRIYVGNIPWDIDDARLEQVFSE 213

Query: 402 HGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
HGKV+ ARVV DRE+GRSRGFGFVTMS+EAE+++A+ +DG ++GR +RVN A ERP
Sbjct: 214 HGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERP 271



Score = 83.6 bits (205), Expect = 8e-16
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Frame = +3

Query: 12 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 191
+ P + ++YVGN+PW + L VF + G V V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 192 SVEDCNTAIEKLDGADYAGRTLRVNF----PNRN 281
S + + AI LDG GRT+RVN P RN
Sbjct: 241 SEAEMSEAIANLDGQTLDGRTIRVNAAEERPRRN 274



Score = 72.0 bits (175), Expect = 2e-12
Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Frame = +3

Query: 177 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPN--RNRGDAPTPRAPRMDQNNSNKLFVG 350
FV++ S ED NT + LD + G +FP+ G+ + P D KLFVG
Sbjct: 55 FVSVLS-EDDNTLV--LDDQEQGG-----DFPSFVGEAGETEEYQEPSEDA----KLFVG 102

Query: 351 NLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAA 530
NL + +D L LF + G V A V+ +RET RSRGFGFVTMST E ++A+
Sbjct: 103 NLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYD 162

Query: 531 IEGRNLRVNMAGERPS 578
+ GR L VN A R S
Sbjct: 163 LNGRLLTVNKAAPRGS 178


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
SV=1
Length = 289

Score = 183 bits (464), Expect = 8e-46
Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 19/212 (8%)
Frame = +3

Query: 6 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 176
F D PP +S + KL+VGNLP++ +S +LA +F+ G+V+MVEVIYDK +GRSRGFG
Sbjct: 76 FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 177 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNF----PNRNRGDAPTPRAP----------- 311
FVTMSSV + A ++ +G + GR LRVN P R G + PR+
Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGG 195

Query: 312 -RMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTE 488
+ N+++VGNL+WGVDD L LFSE GKV+EARV+ DR++GRS+GFGFVT +
Sbjct: 196 GGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSS 255

Query: 489 AEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 584
EV A+ +DGA ++GR +RV+ A RP R
Sbjct: 256 QEVQNAIKSLDGADLDGRQIRVSEAEARPPRR 287



Score = 82.4 bits (202), Expect = 2e-15
Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +3

Query: 306 APRMDQNNSN--KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTM 479
AP +Q+ S KLFVGNL + VD L LF G V V+ D+ TGRSRGFGFVTM
Sbjct: 80 APPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTM 139

Query: 480 STEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSDFF 596
S+ +EV A + +G ++GR LRVN AG P R D F
Sbjct: 140 SSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKREDGF 177


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 273

Score = 179 bits (454), Expect = 1e-44
Identities = 95/184 (51%), Positives = 128/184 (69%), Gaps = 4/184 (2%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
K++VGNLP+S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 225 LDGADYAGRTLRVNF--PNRNRGDAPTPRAPRMDQN--NSNKLFVGNLAWGVDDGMLHDL 392
+G + GR LRVN P R ++ R + +SN+++VGNLAWGVD L L
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETL 207

Query: 393 FSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGER 572
FSE GKV++A+VV DR++GRSRGFGFVT S+ EVN A+ +DG + GR +RV+ A R
Sbjct: 208 FSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 267

Query: 573 PSSR 584
P R
Sbjct: 268 PPRR 271



Score = 85.5 bits (210), Expect = 2e-16
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +3

Query: 33 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 212
+S ++YVGNL W + + L +F + G V +V+YD++SGRSRGFGFVT SS E+ N
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 213 AIEKLDGADYAGRTLRVN 266
AIE LDG D GR +RV+
Sbjct: 245 AIESLDGVDLNGRAIRVS 262


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 291

Score = 177 bits (448), Expect = 5e-44
Identities = 97/213 (45%), Positives = 136/213 (63%), Gaps = 28/213 (13%)
Frame = +3

Query: 21 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 200
P F E + KL+VGNLP+S +S LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81 PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 201 DCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRM--------------------- 317
+ A ++ +G + GR +RVN G AP R
Sbjct: 140 EVEAAEQQFNGYEIDGRAIRVN-----AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSF 194

Query: 318 -------DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVT 476
++SN+++VGNL+WGVDD L +LFSE G V++A+VV DR++GRSRGFGFVT
Sbjct: 195 GGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVT 254

Query: 477 MSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
S+ EVN A++ ++G ++GR++RV+ A ERP
Sbjct: 255 YSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERP 287



Score = 80.9 bits (198), Expect = 5e-15
Identities = 47/101 (46%), Positives = 59/101 (58%)
Frame = +3

Query: 288 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 467
D PR ++ KLFVGNL + VD L LF G V V+ D+ TGRSRGFG
Sbjct: 74 DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFG 131

Query: 468 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 590
FVTMST+ EV A + +G I+GR +RVN AG P+ R +
Sbjct: 132 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 171



Score = 79.3 bits (194), Expect = 2e-14
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Frame = +3

Query: 9 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 164
RD FG +S ++YVGNL W + L +F + G+V +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 165 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 266
RGFGFVT SS ++ N AI+ L+G D GR++RV+
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVS 281


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 292

Score = 176 bits (445), Expect = 1e-43
Identities = 97/213 (45%), Positives = 136/213 (63%), Gaps = 28/213 (13%)
Frame = +3

Query: 21 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 200
P F E + KL+VGNLP+S +S LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82 PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 201 DCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRM--------------------- 317
+ A ++ +G + GR +RVN G AP R
Sbjct: 141 EVEAAEQQFNGYEIDGRAIRVN-----AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSF 195

Query: 318 -------DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVT 476
++SN+++VGNL+WGVDD L +LFSE G V++A+VV DR++GRSRGFGFVT
Sbjct: 196 GGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVT 255

Query: 477 MSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
S+ EVN A++ ++G ++GR++RV+ A ERP
Sbjct: 256 YSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERP 288



Score = 79.7 bits (195), Expect = 1e-14
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Frame = +3

Query: 9 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 164
RD FG +S ++YVGNL W + L +F + G+V +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 165 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 266
RGFGFVT SS ++ N AI+ L+G D GR++RV+
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVS 282



Score = 79.0 bits (193), Expect = 2e-14
Identities = 46/101 (45%), Positives = 59/101 (58%)
Frame = +3

Query: 288 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 467
D PR ++ KLFVGNL + VD L LF G V V+ D+ +GRSRGFG
Sbjct: 75 DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFG 132

Query: 468 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 590
FVTMST+ EV A + +G I+GR +RVN AG P+ R +
Sbjct: 133 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 172


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 279

Score = 173 bits (439), Expect = 6e-43
Identities = 95/195 (48%), Positives = 125/195 (64%), Gaps = 15/195 (7%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
K++VGNL +S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNS---------------NKLFVGNLA 359
+G + GR LRVN G P R + NS N+++VGNLA
Sbjct: 148 FNGYELDGRALRVN-----SGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLA 202

Query: 360 WGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEG 539
WGVD L LFSE GKV++A+VV DR++GRSRGFGFVT S+ EVN A+ +DG + G
Sbjct: 203 WGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNG 262

Query: 540 RNLRVNMAGERPSSR 584
R +RV+ A RP R
Sbjct: 263 RAIRVSPAEARPPRR 277



Score = 86.3 bits (212), Expect = 1e-16
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
Frame = +3

Query: 3 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 158
SFR+N G +S ++YVGNL W + + L +F + G V +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 159 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 266
RSRGFGFVT SS E+ N AIE LDG D GR +RV+
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 268


>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 324

Score = 155 bits (391), Expect = 2e-37
Identities = 77/182 (42%), Positives = 117/182 (64%), Gaps = 6/182 (3%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
+LYVGNLP+S S +L+ +F + G+V VE++YD+ + RSRGF FVTM SVE+ AI
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQ------NNSNKLFVGNLAWGVDDGMLH 386
DG+ GRT++VNFP RG + ++ ++ +KL+V NL+W + L
Sbjct: 175 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLR 234

Query: 387 DLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAG 566
D F++ + A+V+ DR +GRSRGFGF+T S+ +N AL+ M+ +EGR LR+N+AG
Sbjct: 235 DAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAG 294

Query: 567 ER 572
++
Sbjct: 295 QK 296



Score = 76.3 bits (186), Expect = 1e-13
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3

Query: 27 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 206
F +S KLYV NL W+ S+ L F +VIYD+ SGRSRGFGF+T SS E
Sbjct: 212 FVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAM 271

Query: 207 NTAIEKLDGADYAGRTLRVNFPNRNRGDAPTP---RAPRMDQNNSNKL 341
N+A++ ++ + GR LR+N + + P +P D +NS L
Sbjct: 272 NSALDTMNEVELEGRPLRLNVAGQKAPVSSPPVVETSPENDSDNSELL 319


tr_hit_id A9SLJ0
Definition tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 190
Score (bit) 219.0
E-value 9.0e-56
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951220|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_N02, 5'
(642 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit... 219 9e-56
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten... 207 4e-52
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten... 200 7e-50
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 199 9e-50
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra... 199 2e-49
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs... 198 2e-49
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea... 198 2e-49
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza... 198 2e-49
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 197 3e-49
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 197 5e-49
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ... 196 1e-48
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome... 194 3e-48
tr|Q39209|Q39209_ARATH RNA binding protein (Fragment) OS=Arabido... 192 2e-47
tr|Q94EH5|Q94EH5_ARATH AT4g24770/F22K18_30 OS=Arabidopsis thalia... 191 4e-47
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ... 189 1e-46
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs... 189 1e-46
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza... 189 2e-46
tr|Q40270|Q40270_MESCR RNA-binding protein OS=Mesembryanthemum c... 188 2e-46
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb... 188 2e-46
tr|O23798|O23798_WHEAT Ps16 protein OS=Triticum aestivum PE=2 SV=1 185 2e-45
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs... 184 4e-45
tr|O81987|O81987_HORVU Cp31AHv protein OS=Hordeum vulgare PE=2 SV=1 184 4e-45
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza... 184 4e-45
tr|Q650W6|Q650W6_ORYSJ Os09g0565200 protein OS=Oryza sativa subs... 183 7e-45
tr|B8BEL6|B8BEL6_ORYSI Putative uncharacterized protein OS=Oryza... 183 7e-45
tr|A6N0D0|A6N0D0_ORYSI Chloroplast 28 kDa ribonucleoprotein (Fra... 183 7e-45
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops... 183 9e-45
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops... 183 9e-45
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea... 183 9e-45
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea... 183 9e-45

>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_47163 PE=4 SV=1
Length = 192

Score = 219 bits (559), Expect = 9e-56
Identities = 108/190 (56%), Positives = 144/190 (75%), Gaps = 10/190 (5%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED IE+
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 225 LDGADYAGRTLRVNFPN---------RNRGDAPTPRAPR-MDQNNSNKLFVGNLAWGVDD 374
LDG D GR L+V+FP R G + RAPR +++ NK+FVGNL+WGVD+
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQNRPSFPRGEGYQRSERAPRPAARDDPNKVFVGNLSWGVDN 120

Query: 375 GMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRV 554
G L +LFS++GKV++ARVV DRE+GRSRGFGFVT S +EV+ A++ +DGA +GR LRV
Sbjct: 121 GALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDSLDGAEFDGRELRV 180

Query: 555 NMAGERPSSR 584
N+AG +P+S+
Sbjct: 181 NLAGNKPASK 190


>tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_134646 PE=4 SV=1
Length = 224

Score = 207 bits (527), Expect = 4e-52
Identities = 99/180 (55%), Positives = 131/180 (72%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
KLYVGNLPW+C+S +LA + G+VD+VEVIYDK SGRSRGF FVTM++ ED I
Sbjct: 45 KLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDAQAVINA 104

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEH 404
LDG D GR L+VN+P + D P ++++NKLFVGNL+WG D+ L+ FSE+
Sbjct: 105 LDGTDMGGRPLKVNYPQSQK-DKPRVERSERPRDDANKLFVGNLSWGCDEAALYSFFSEY 163

Query: 405 GKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 584
G V++A+VV DR++GRSRGFGFVTM + A N A+ +DGA ++GR LRVN+AGE+P +R
Sbjct: 164 GTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDGRRLRVNLAGEKPPTR 223



Score = 73.9 bits (180), Expect = 8e-12
Identities = 37/91 (40%), Positives = 53/91 (58%)
Frame = +3

Query: 318 DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEV 497
++ KL+VGNL W D L ++ S+HG V V+ D+ +GRSRGF FVTM+T +
Sbjct: 39 EEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDA 98

Query: 498 NQALNKMDGAAIEGRNLRVNMAGERPSSRSD 590
+N +DG + GR L+VN P S+ D
Sbjct: 99 QAVINALDGTDMGGRPLKVNY----PQSQKD 125


>tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_147462 PE=4 SV=1
Length = 213

Score = 200 bits (508), Expect = 7e-50
Identities = 96/188 (51%), Positives = 130/188 (69%), Gaps = 7/188 (3%)
Frame = +3

Query: 42 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 221
+K+YVGNLPW+C+S +LA + + G+VD+VEVIYDK SGRSRGF FVTM+S +D I
Sbjct: 23 SKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALIN 82

Query: 222 KLDGADYAGRTLRVNFPNRNR-------GDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGM 380
LDG+D GR L+VNFP + +A P A R +++ NKLFVGN+ WG D+
Sbjct: 83 ALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADRRPRDDPNKLFVGNIPWGCDEAA 142

Query: 381 LHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNM 560
+ LFS +G V++A++V DR++GRSRGFGFVTM + A+ +DG ++GR LRVN
Sbjct: 143 MTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNF 202

Query: 561 AGERPSSR 584
AGE+P SR
Sbjct: 203 AGEKPPSR 210



Score = 74.7 bits (182), Expect = 4e-12
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = +3

Query: 306 APRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMST 485
AP ++ +K++VGNL W D L ++ S+HG V V+ D+ +GRSRGF FVTM++
Sbjct: 14 APVAEEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMAS 73

Query: 486 EAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 590
+ +N +DG+ + GR L+VN P S+ D
Sbjct: 74 HDDAQALINALDGSDMGGRALKVNF----PQSQKD 104


>tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_34983 PE=4 SV=1
Length = 194

Score = 199 bits (507), Expect = 9e-50
Identities = 98/194 (50%), Positives = 135/194 (69%), Gaps = 17/194 (8%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
KLYVGNLPW+C+S +LA + + SV+ V+V+YD++SGRSRGF FVTMS+ E + I++
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60

Query: 225 LDGADYAGRTLRVNFP-------------NRNRGDAPTPRAPRMDQN----NSNKLFVGN 353
LDG+D+ GR L+V+FP N RGD + R PR + N+NK+F+GN
Sbjct: 61 LDGSDFGGRPLKVSFPQPRENRDNKPRFGNNERGDRRSDRPPRQGSDRVLDNTNKMFIGN 120

Query: 354 LAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAI 533
L+W D L +FSE+G V++A+VV DR+TG+SRGFGFVTMS +EV+ A+ +DGA
Sbjct: 121 LSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGAEF 180

Query: 534 EGRNLRVNMAGERP 575
EGR +RV+ AGERP
Sbjct: 181 EGREMRVSEAGERP 194



Score = 89.0 bits (219), Expect = 2e-16
Identities = 36/78 (46%), Positives = 60/78 (76%)
Frame = +3

Query: 33 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 212
++ K+++GNL WSC+++ L VF + GSV +V+YD+++G+SRGFGFVTMS+ + +
Sbjct: 111 DNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSN 170

Query: 213 AIEKLDGADYAGRTLRVN 266
A++ LDGA++ GR +RV+
Sbjct: 171 AVQNLDGAEFEGREMRVS 188


>tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein
(Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
Length = 205

Score = 199 bits (505), Expect = 2e-49
Identities = 98/180 (54%), Positives = 134/180 (74%), Gaps = 3/180 (1%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ AIE+
Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLF 395
+G + GR LRVN D PR+PR +N SNKL+VGNLAWGVD+ L +LF
Sbjct: 82 FNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLF 141

Query: 396 SEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
SE G VL+A+V+ DRE+GRSRGFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 142 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 201



Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/85 (52%), Positives = 55/85 (64%)
Frame = +3

Query: 9 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
R G F +S KLYVGNL W ++ L +F + G+V +VIYD+ESGRSRGFGFVT
Sbjct: 111 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 169

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRV 263
S E+ N AI LDG D GR +RV
Sbjct: 170 GSAEEVNNAISNLDGVDLDGRQIRV 194


>tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subsp.
japonica GN=P0519E12.113 PE=4 SV=1
Length = 264

Score = 198 bits (504), Expect = 2e-49
Identities = 97/180 (53%), Positives = 134/180 (74%), Gaps = 3/180 (1%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ A+E+
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLF 395
+G + GR LRVN D PR+PR +N SNKL+VGNLAWGVD+ L +LF
Sbjct: 141 FNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLF 200

Query: 396 SEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
SE G VL+A+V+ DRE+GRSRGFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 201 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 260



Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/85 (52%), Positives = 55/85 (64%)
Frame = +3

Query: 9 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
R G F +S KLYVGNL W ++ L +F + G+V +VIYD+ESGRSRGFGFVT
Sbjct: 170 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 228

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRV 263
S E+ N AI LDG D GR +RV
Sbjct: 229 GSAEEVNNAISNLDGVDLDGRQIRV 253


>tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 299

Score = 198 bits (504), Expect = 2e-49
Identities = 97/185 (52%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
K++VGNLPWS +S ELA +F+ G V MVEVIYD+++GRSRGF FVTM++ D + A+EK
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRA------PRMDQNNSNKLFVGNLAWGVDDGMLH 386
+G +Y GRTLRVN D+ PR P + N++N++FVGNL WG DD L
Sbjct: 174 FNGYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLE 233

Query: 387 DLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAG 566
LFS+HGKV+EA+VV DRETGRSRGFGFVT+S+ E+ +A++ +DG+ ++GR ++V +A
Sbjct: 234 QLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISSLDGSDMDGRQIKVTLAE 293

Query: 567 ERPSS 581
+P+S
Sbjct: 294 TKPAS 298



Score = 78.6 bits (192), Expect = 3e-13
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +3

Query: 15 NGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
N P G S +++VGNLPW + L +F G V +V+YD+E+GRSRGFGFVT+
Sbjct: 205 NEKPSGNYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTL 264

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRV 263
SS ++ AI LDG+D GR ++V
Sbjct: 265 SSPQEIEEAISSLDGSDMDGRQIKV 289


>tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26976 PE=4 SV=1
Length = 259

Score = 198 bits (504), Expect = 2e-49
Identities = 97/180 (53%), Positives = 134/180 (74%), Gaps = 3/180 (1%)
Frame = +3

Query: 45 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+ A+E+
Sbjct: 76 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLF 395
+G + GR LRVN D PR+PR +N SNKL+VGNLAWGVD+ L +LF
Sbjct: 136 FNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLF 195

Query: 396 SEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
SE G VL+A+V+ DRE+GRSRGFGFVT + EVN A++ +DG ++GR +RV +A +P
Sbjct: 196 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 255



Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/85 (52%), Positives = 55/85 (64%)
Frame = +3

Query: 9 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
R G F +S KLYVGNL W ++ L +F + G+V +VIYD+ESGRSRGFGFVT
Sbjct: 165 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 223

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRV 263
S E+ N AI LDG D GR +RV
Sbjct: 224 GSAEEVNNAISNLDGVDLDGRQIRV 248


>tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
Length = 264

Score = 197 bits (502), Expect = 3e-49
Identities = 101/192 (52%), Positives = 144/192 (75%), Gaps = 3/192 (1%)
Frame = +3

Query: 9 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
R G F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTM
Sbjct: 73 RSGGDEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 131

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRVNF---PNRNRGDAPTPRAPRMDQNNSNKLFVGNLA 359
SSVE+ A+++ +G GR+LRVN P R+R +P+P+ PR D +N+++VGNL+
Sbjct: 132 SSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRS-SPSPQRPRGD---ANRVYVGNLS 187

Query: 360 WGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEG 539
WGVD+ L +LFSE G+VLEAR++ DRE+GRSRGFGFVT + EV A++ +DGA ++G
Sbjct: 188 WGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDG 247

Query: 540 RNLRVNMAGERP 575
R +RV +A +P
Sbjct: 248 RQIRVTVAESKP 259



Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +3

Query: 336 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 515
++FVGNL + VD L LF + G V V+ D+ TGRSRGFGFVTMS+ EV A+++
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 143

Query: 516 MDGAAIEGRNLRVNMAGERPSSRS 587
+G ++GR+LRVN P RS
Sbjct: 144 FNGYVLDGRSLRVNSGPPPPRDRS 167


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
Length = 268

Score = 197 bits (501), Expect = 5e-49
Identities = 100/196 (51%), Positives = 138/196 (70%), Gaps = 8/196 (4%)
Frame = +3

Query: 12 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 191
D F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70 DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 192 SVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMD--------QNNSNKLFV 347
S E+ A+E+ +G + GR LRVN D TPRAPR +++NK++V
Sbjct: 129 SAEEAEAAVEQFNGYAFQGRQLRVNCGPPPPRDESTPRAPRGGGGGGGGGFVDSANKVYV 188

Query: 348 GNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGA 527
GNLAWGVD+ L +LFSE G+VL+A+V+ DR++GRSRGFGFVT + EVN A++ +DG
Sbjct: 189 GNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEVNNAISNLDGI 248

Query: 528 AIEGRNLRVNMAGERP 575
++GR +RV A +P
Sbjct: 249 DLDGRQIRVTAAESKP 264



Score = 80.5 bits (197), Expect = 8e-14
Identities = 43/84 (51%), Positives = 50/84 (59%)
Frame = +3

Query: 336 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 515
KLFVGNL + VD L LF + G V VV DR TGRSRGFGFVTMS+ E A+ +
Sbjct: 80 KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAEAAVEQ 139

Query: 516 MDGAAIEGRNLRVNMAGERPSSRS 587
+G A +GR LRVN P S
Sbjct: 140 FNGYAFQGRQLRVNCGPPPPRDES 163