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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951220
Clone id TST38A01NGRL0010_N02
Library
Length 642
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_N02. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CTTCTTTTCGGGACAACGGCCCGCCCTTTGGTGAGTCTGTGGCCAAGCTGTATGTTGGGA
ACCTGCCATGGAGCTGCAACAGCGAAGAACTTGCTGGCGTTTTTCAGAAAGTGGGCAGCG
TAGACATGGTTGAGGTTATTTATGACAAAGAGTCTGGCAGGAGTCGTGGTTTTGGGTTTG
TCACTATGAGCTCTGTAGAGGACTGTAATACTGCCATTGAGAAGCTAGACGGGGCTGATT
ATGCTGGAAGGACATTGCGAGTGAATTTTCCCAACCGTAACAGAGGAGATGCTCCTACCC
CTCGTGCTCCAAGAATGGACCAAAACAATTCCAACAAGTTGTTCGTTGGAAACTTGGCCT
GGGGAGTTGATGATGGTATGCTACATGATCTGTTCAGCGAGCACGGAAAAGTGCTGGAGG
CCAGAGTTGTCAATGATCGGGAAACTGGGCGGTCTCGTGGCTTTGGTTTTGTTACCATGT
CTACTGAGGCTGAAGTCAATCAAGCTTTGAACAAAATGGATGGAGCGGCTATTGAAGGGA
GGAATCTGCGCGTGAACATGGCTGGCGAAAGACCTTCCTCTAGATCCGATTTCTTCTAGA
AAAATTGCCCGTTGGGGTTTGAACTTGAGACCATCTCCTCTA
■■Homology search results ■■ -
sp_hit_id P28644
Definition sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea
Align length 190
Score (bit) 199.0
E-value 1.0e-50
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951220|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_N02, 5'
         (642 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...   199   1e-50
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...   192   2e-48
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...   186   7e-47
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...   186   7e-47
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...   183   8e-46
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...   179   1e-44
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...   177   5e-44
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...   176   1e-43
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...   173   6e-43
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...   155   2e-37
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S...   149   2e-35
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote...   106   9e-23
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...   105   2e-22
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G...   100   6e-21
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G...   100   6e-21
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho...    99   2e-20
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis...    97   5e-20
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05...    96   2e-19
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15...    95   4e-19
sp|O74400|YOCE_SCHPO Uncharacterized RNA-binding protein C4F6.14...    94   5e-19
sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic ...    94   5e-19
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ...    92   2e-18
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-...    92   3e-18
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ...    92   3e-18
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ...    91   5e-18
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido...    91   5e-18
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ...    91   7e-18
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ...    89   1e-17
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ...    89   1e-17
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ...    89   3e-17

>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 233

 Score =  199 bits (505), Expect = 1e-50
 Identities = 105/190 (55%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
 Frame = +3

Query: 12  DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 185
           + G  F E    AKL+VGNLP+  +SE+LAG+F   G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43  EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 186 MSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWG 365
           MS+VE+   A+E L+G D  GR L VN   +        RAPR D   S +++VGNL W 
Sbjct: 103 MSTVEEAEKAVELLNGYDMDGRQLTVN---KAAPRGSPERAPRGDFEPSCRVYVGNLPWD 159

Query: 366 VDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRN 545
           VD   L  LFSEHGKV+ ARVV+DRETGRSRGFGFVTMS+E+EVN A+  +DG  ++GR 
Sbjct: 160 VDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRA 219

Query: 546 LRVNMAGERP 575
           +RVN+A ERP
Sbjct: 220 VRVNVAEERP 229



 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = +3

Query: 336 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 515
           KLFVGNL + VD   L  +F   G V  A V+ +RET RSRGFGFVTMST  E  +A+  
Sbjct: 56  KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115

Query: 516 MDGAAIEGRNLRVNMAGERPS----SRSDF 593
           ++G  ++GR L VN A  R S     R DF
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPERAPRGDF 145


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
          Length = 329

 Score =  192 bits (487), Expect = 2e-48
 Identities = 102/181 (56%), Positives = 135/181 (74%)
 Frame = +3

Query: 42  AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 221
           AKL+VGNL +  NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++  TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 222 KLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSE 401
           K +  D  GR L VN     RG  P  RAPR+ +  + +++VGNL W VD+G L  LFSE
Sbjct: 210 KFNRYDLNGRLLTVN-KAAPRGSRPE-RAPRVYEP-AFRVYVGNLPWDVDNGRLEQLFSE 266

Query: 402 HGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSS 581
           HGKV+EARVV DRETGRSRGFGFVTMS   E+N+A++ +DG  +EGR +RVN+A ERP  
Sbjct: 267 HGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

Query: 582 R 584
           R
Sbjct: 327 R 327



 Score = 87.0 bits (214), Expect = 7e-17
 Identities = 41/85 (48%), Positives = 55/85 (64%)
 Frame = +3

Query: 12  DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 191
           +  P   E   ++YVGNLPW  ++  L  +F + G V    V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 192 SVEDCNTAIEKLDGADYAGRTLRVN 266
            V++ N AI  LDG +  GR +RVN
Sbjct: 294 DVDELNEAISALDGQNLEGRAIRVN 318



 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
 Frame = +3

Query: 168 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPRMDQNN 329
           G G V +   E+   + +  +G +  G      V+  + + GD    A + RA   + + 
Sbjct: 89  GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 148

Query: 330 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 509
             KLFVGNLA+ V+   L  LF + G V  A V+ +RET +SRGFGFVTMS+  E   A+
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208

Query: 510 NKMDGAAIEGRNLRVNMAGERPS 578
            K +   + GR L VN A  R S
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGS 231


>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 315

 Score =  186 bits (473), Expect = 7e-47
 Identities = 98/184 (53%), Positives = 136/184 (73%)
 Frame = +3

Query: 42  AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 221
           AKL+VGNLP+  +SE LA +F++ G V++ EVIY++++ +SRGFGFVTMS+VE+   A+E
Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 195

Query: 222 KLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSE 401
             +  D  GR L VN   R RG+ P  R PR  +  S +++VGN+ WG+DD  L  LFSE
Sbjct: 196 MYNRYDVNGRLLTVNKAAR-RGERPE-RPPRTFEQ-SYRIYVGNIPWGIDDARLEQLFSE 252

Query: 402 HGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSS 581
           HGKV+ ARVV DRETGRSRGFGFVTM++EAE++ A+  +DG +++GR +RVN+A +R S 
Sbjct: 253 HGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR-SR 311

Query: 582 RSDF 593
           R+ F
Sbjct: 312 RNTF 315



 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 38/78 (48%), Positives = 51/78 (65%)
 Frame = +3

Query: 33  ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 212
           E   ++YVGN+PW  +   L  +F + G V    V+YD+E+GRSRGFGFVTM+S  + + 
Sbjct: 227 EQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSD 286

Query: 213 AIEKLDGADYAGRTLRVN 266
           AI  LDG    GRT+RVN
Sbjct: 287 AIANLDGQSLDGRTIRVN 304


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score =  186 bits (473), Expect = 7e-47
 Identities = 98/178 (55%), Positives = 130/178 (73%)
 Frame = +3

Query: 42  AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 221
           AKL+VGNLP+  +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97  AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156

Query: 222 KLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSE 401
                D  GR L VN     RG  P  RAPR  Q  + +++VGN+ W +DD  L  +FSE
Sbjct: 157 LYSQYDLNGRLLTVN-KAAPRGSRPE-RAPRTFQP-TYRIYVGNIPWDIDDARLEQVFSE 213

Query: 402 HGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
           HGKV+ ARVV DRE+GRSRGFGFVTMS+EAE+++A+  +DG  ++GR +RVN A ERP
Sbjct: 214 HGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERP 271



 Score = 83.6 bits (205), Expect = 8e-16
 Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
 Frame = +3

Query: 12  DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 191
           +  P   +   ++YVGN+PW  +   L  VF + G V    V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 192 SVEDCNTAIEKLDGADYAGRTLRVNF----PNRN 281
           S  + + AI  LDG    GRT+RVN     P RN
Sbjct: 241 SEAEMSEAIANLDGQTLDGRTIRVNAAEERPRRN 274



 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
 Frame = +3

Query: 177 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPN--RNRGDAPTPRAPRMDQNNSNKLFVG 350
           FV++ S ED NT +  LD  +  G     +FP+     G+    + P  D     KLFVG
Sbjct: 55  FVSVLS-EDDNTLV--LDDQEQGG-----DFPSFVGEAGETEEYQEPSEDA----KLFVG 102

Query: 351 NLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAA 530
           NL + +D   L  LF + G V  A V+ +RET RSRGFGFVTMST  E ++A+       
Sbjct: 103 NLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYD 162

Query: 531 IEGRNLRVNMAGERPS 578
           + GR L VN A  R S
Sbjct: 163 LNGRLLTVNKAAPRGS 178


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score =  183 bits (464), Expect = 8e-46
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 19/212 (8%)
 Frame = +3

Query: 6   FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 176
           F D  PP  +S +   KL+VGNLP++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFG
Sbjct: 76  FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 177 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNF----PNRNRGDAPTPRAP----------- 311
           FVTMSSV +   A ++ +G +  GR LRVN     P R  G +  PR+            
Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGG 195

Query: 312 -RMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTE 488
                 + N+++VGNL+WGVDD  L  LFSE GKV+EARV+ DR++GRS+GFGFVT  + 
Sbjct: 196 GGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSS 255

Query: 489 AEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 584
            EV  A+  +DGA ++GR +RV+ A  RP  R
Sbjct: 256 QEVQNAIKSLDGADLDGRQIRVSEAEARPPRR 287



 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = +3

Query: 306 APRMDQNNSN--KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTM 479
           AP  +Q+ S   KLFVGNL + VD   L  LF   G V    V+ D+ TGRSRGFGFVTM
Sbjct: 80  APPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTM 139

Query: 480 STEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSDFF 596
           S+ +EV  A  + +G  ++GR LRVN AG  P  R D F
Sbjct: 140 SSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKREDGF 177


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score =  179 bits (454), Expect = 1e-44
 Identities = 95/184 (51%), Positives = 128/184 (69%), Gaps = 4/184 (2%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           K++VGNLP+S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 225 LDGADYAGRTLRVNF--PNRNRGDAPTPRAPRMDQN--NSNKLFVGNLAWGVDDGMLHDL 392
            +G +  GR LRVN   P   R ++      R   +  +SN+++VGNLAWGVD   L  L
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETL 207

Query: 393 FSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGER 572
           FSE GKV++A+VV DR++GRSRGFGFVT S+  EVN A+  +DG  + GR +RV+ A  R
Sbjct: 208 FSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 267

Query: 573 PSSR 584
           P  R
Sbjct: 268 PPRR 271



 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = +3

Query: 33  ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 212
           +S  ++YVGNL W  + + L  +F + G V   +V+YD++SGRSRGFGFVT SS E+ N 
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 213 AIEKLDGADYAGRTLRVN 266
           AIE LDG D  GR +RV+
Sbjct: 245 AIESLDGVDLNGRAIRVS 262


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score =  177 bits (448), Expect = 5e-44
 Identities = 97/213 (45%), Positives = 136/213 (63%), Gaps = 28/213 (13%)
 Frame = +3

Query: 21  PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 200
           P F E + KL+VGNLP+S +S  LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 201 DCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRM--------------------- 317
           +   A ++ +G +  GR +RVN      G AP  R                         
Sbjct: 140 EVEAAEQQFNGYEIDGRAIRVN-----AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSF 194

Query: 318 -------DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVT 476
                    ++SN+++VGNL+WGVDD  L +LFSE G V++A+VV DR++GRSRGFGFVT
Sbjct: 195 GGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVT 254

Query: 477 MSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
            S+  EVN A++ ++G  ++GR++RV+ A ERP
Sbjct: 255 YSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERP 287



 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 47/101 (46%), Positives = 59/101 (58%)
 Frame = +3

Query: 288 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 467
           D      PR  ++   KLFVGNL + VD   L  LF   G V    V+ D+ TGRSRGFG
Sbjct: 74  DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFG 131

Query: 468 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 590
           FVTMST+ EV  A  + +G  I+GR +RVN AG  P+ R +
Sbjct: 132 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 171



 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
 Frame = +3

Query: 9   RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 164
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 165 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 266
           RGFGFVT SS ++ N AI+ L+G D  GR++RV+
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVS 281


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score =  176 bits (445), Expect = 1e-43
 Identities = 97/213 (45%), Positives = 136/213 (63%), Gaps = 28/213 (13%)
 Frame = +3

Query: 21  PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 200
           P F E + KL+VGNLP+S +S  LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 201 DCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRM--------------------- 317
           +   A ++ +G +  GR +RVN      G AP  R                         
Sbjct: 141 EVEAAEQQFNGYEIDGRAIRVN-----AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSF 195

Query: 318 -------DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVT 476
                    ++SN+++VGNL+WGVDD  L +LFSE G V++A+VV DR++GRSRGFGFVT
Sbjct: 196 GGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVT 255

Query: 477 MSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
            S+  EVN A++ ++G  ++GR++RV+ A ERP
Sbjct: 256 YSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERP 288



 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
 Frame = +3

Query: 9   RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 164
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 165 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 266
           RGFGFVT SS ++ N AI+ L+G D  GR++RV+
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVS 282



 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 46/101 (45%), Positives = 59/101 (58%)
 Frame = +3

Query: 288 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 467
           D      PR  ++   KLFVGNL + VD   L  LF   G V    V+ D+ +GRSRGFG
Sbjct: 75  DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFG 132

Query: 468 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 590
           FVTMST+ EV  A  + +G  I+GR +RVN AG  P+ R +
Sbjct: 133 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 172


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score =  173 bits (439), Expect = 6e-43
 Identities = 95/195 (48%), Positives = 125/195 (64%), Gaps = 15/195 (7%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           K++VGNL +S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNS---------------NKLFVGNLA 359
            +G +  GR LRVN      G  P  R     + NS               N+++VGNLA
Sbjct: 148 FNGYELDGRALRVN-----SGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLA 202

Query: 360 WGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEG 539
           WGVD   L  LFSE GKV++A+VV DR++GRSRGFGFVT S+  EVN A+  +DG  + G
Sbjct: 203 WGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNG 262

Query: 540 RNLRVNMAGERPSSR 584
           R +RV+ A  RP  R
Sbjct: 263 RAIRVSPAEARPPRR 277



 Score = 86.3 bits (212), Expect = 1e-16
 Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
 Frame = +3

Query: 3   SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 158
           SFR+N    G        +S  ++YVGNL W  + + L  +F + G V   +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 159 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 266
           RSRGFGFVT SS E+ N AIE LDG D  GR +RV+
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 268


>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 324

 Score =  155 bits (391), Expect = 2e-37
 Identities = 77/182 (42%), Positives = 117/182 (64%), Gaps = 6/182 (3%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           +LYVGNLP+S  S +L+ +F + G+V  VE++YD+ + RSRGF FVTM SVE+   AI  
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQ------NNSNKLFVGNLAWGVDDGMLH 386
            DG+   GRT++VNFP   RG      + ++        ++ +KL+V NL+W +    L 
Sbjct: 175 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLR 234

Query: 387 DLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAG 566
           D F++    + A+V+ DR +GRSRGFGF+T S+   +N AL+ M+   +EGR LR+N+AG
Sbjct: 235 DAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAG 294

Query: 567 ER 572
           ++
Sbjct: 295 QK 296



 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = +3

Query: 27  FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 206
           F +S  KLYV NL W+  S+ L   F         +VIYD+ SGRSRGFGF+T SS E  
Sbjct: 212 FVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAM 271

Query: 207 NTAIEKLDGADYAGRTLRVNFPNRNRGDAPTP---RAPRMDQNNSNKL 341
           N+A++ ++  +  GR LR+N   +    +  P    +P  D +NS  L
Sbjct: 272 NSALDTMNEVELEGRPLRLNVAGQKAPVSSPPVVETSPENDSDNSELL 319
tr_hit_id A9SLJ0
Definition tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 190
Score (bit) 219.0
E-value 9.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951220|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_N02, 5'
         (642 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit...   219   9e-56
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten...   207   4e-52
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten...   200   7e-50
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit...   199   9e-50
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra...   199   2e-49
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs...   198   2e-49
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea...   198   2e-49
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza...   198   2e-49
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1      197   3e-49
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1      197   5e-49
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ...   196   1e-48
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome...   194   3e-48
tr|Q39209|Q39209_ARATH RNA binding protein (Fragment) OS=Arabido...   192   2e-47
tr|Q94EH5|Q94EH5_ARATH AT4g24770/F22K18_30 OS=Arabidopsis thalia...   191   4e-47
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ...   189   1e-46
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs...   189   1e-46
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza...   189   2e-46
tr|Q40270|Q40270_MESCR RNA-binding protein OS=Mesembryanthemum c...   188   2e-46
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb...   188   2e-46
tr|O23798|O23798_WHEAT Ps16 protein OS=Triticum aestivum PE=2 SV=1    185   2e-45
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs...   184   4e-45
tr|O81987|O81987_HORVU Cp31AHv protein OS=Hordeum vulgare PE=2 SV=1   184   4e-45
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza...   184   4e-45
tr|Q650W6|Q650W6_ORYSJ Os09g0565200 protein OS=Oryza sativa subs...   183   7e-45
tr|B8BEL6|B8BEL6_ORYSI Putative uncharacterized protein OS=Oryza...   183   7e-45
tr|A6N0D0|A6N0D0_ORYSI Chloroplast 28 kDa ribonucleoprotein (Fra...   183   7e-45
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops...   183   9e-45
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops...   183   9e-45
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea...   183   9e-45
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea...   183   9e-45

>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47163 PE=4 SV=1
          Length = 192

 Score =  219 bits (559), Expect = 9e-56
 Identities = 108/190 (56%), Positives = 144/190 (75%), Gaps = 10/190 (5%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED    IE+
Sbjct: 1   KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 225 LDGADYAGRTLRVNFPN---------RNRGDAPTPRAPR-MDQNNSNKLFVGNLAWGVDD 374
           LDG D  GR L+V+FP          R  G   + RAPR   +++ NK+FVGNL+WGVD+
Sbjct: 61  LDGHDVGGRPLKVSFPQSKQNRPSFPRGEGYQRSERAPRPAARDDPNKVFVGNLSWGVDN 120

Query: 375 GMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRV 554
           G L +LFS++GKV++ARVV DRE+GRSRGFGFVT S  +EV+ A++ +DGA  +GR LRV
Sbjct: 121 GALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDSLDGAEFDGRELRV 180

Query: 555 NMAGERPSSR 584
           N+AG +P+S+
Sbjct: 181 NLAGNKPASK 190


>tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_134646 PE=4 SV=1
          Length = 224

 Score =  207 bits (527), Expect = 4e-52
 Identities = 99/180 (55%), Positives = 131/180 (72%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           KLYVGNLPW+C+S +LA +    G+VD+VEVIYDK SGRSRGF FVTM++ ED    I  
Sbjct: 45  KLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDAQAVINA 104

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEH 404
           LDG D  GR L+VN+P   + D P        ++++NKLFVGNL+WG D+  L+  FSE+
Sbjct: 105 LDGTDMGGRPLKVNYPQSQK-DKPRVERSERPRDDANKLFVGNLSWGCDEAALYSFFSEY 163

Query: 405 GKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 584
           G V++A+VV DR++GRSRGFGFVTM + A  N A+  +DGA ++GR LRVN+AGE+P +R
Sbjct: 164 GTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDGRRLRVNLAGEKPPTR 223



 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 37/91 (40%), Positives = 53/91 (58%)
 Frame = +3

Query: 318 DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEV 497
           ++    KL+VGNL W  D   L ++ S+HG V    V+ D+ +GRSRGF FVTM+T  + 
Sbjct: 39  EEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDA 98

Query: 498 NQALNKMDGAAIEGRNLRVNMAGERPSSRSD 590
              +N +DG  + GR L+VN     P S+ D
Sbjct: 99  QAVINALDGTDMGGRPLKVNY----PQSQKD 125


>tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_147462 PE=4 SV=1
          Length = 213

 Score =  200 bits (508), Expect = 7e-50
 Identities = 96/188 (51%), Positives = 130/188 (69%), Gaps = 7/188 (3%)
 Frame = +3

Query: 42  AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 221
           +K+YVGNLPW+C+S +LA +  + G+VD+VEVIYDK SGRSRGF FVTM+S +D    I 
Sbjct: 23  SKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALIN 82

Query: 222 KLDGADYAGRTLRVNFPNRNR-------GDAPTPRAPRMDQNNSNKLFVGNLAWGVDDGM 380
            LDG+D  GR L+VNFP   +        +A  P A R  +++ NKLFVGN+ WG D+  
Sbjct: 83  ALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADRRPRDDPNKLFVGNIPWGCDEAA 142

Query: 381 LHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNM 560
           +  LFS +G V++A++V DR++GRSRGFGFVTM    +   A+  +DG  ++GR LRVN 
Sbjct: 143 MTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNF 202

Query: 561 AGERPSSR 584
           AGE+P SR
Sbjct: 203 AGEKPPSR 210



 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 37/95 (38%), Positives = 57/95 (60%)
 Frame = +3

Query: 306 APRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMST 485
           AP  ++   +K++VGNL W  D   L ++ S+HG V    V+ D+ +GRSRGF FVTM++
Sbjct: 14  APVAEEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMAS 73

Query: 486 EAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 590
             +    +N +DG+ + GR L+VN     P S+ D
Sbjct: 74  HDDAQALINALDGSDMGGRALKVNF----PQSQKD 104


>tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_34983 PE=4 SV=1
          Length = 194

 Score =  199 bits (507), Expect = 9e-50
 Identities = 98/194 (50%), Positives = 135/194 (69%), Gaps = 17/194 (8%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           KLYVGNLPW+C+S +LA +   + SV+ V+V+YD++SGRSRGF FVTMS+ E   + I++
Sbjct: 1   KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60

Query: 225 LDGADYAGRTLRVNFP-------------NRNRGDAPTPRAPRMDQN----NSNKLFVGN 353
           LDG+D+ GR L+V+FP             N  RGD  + R PR   +    N+NK+F+GN
Sbjct: 61  LDGSDFGGRPLKVSFPQPRENRDNKPRFGNNERGDRRSDRPPRQGSDRVLDNTNKMFIGN 120

Query: 354 LAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAI 533
           L+W  D   L  +FSE+G V++A+VV DR+TG+SRGFGFVTMS  +EV+ A+  +DGA  
Sbjct: 121 LSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGAEF 180

Query: 534 EGRNLRVNMAGERP 575
           EGR +RV+ AGERP
Sbjct: 181 EGREMRVSEAGERP 194



 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 36/78 (46%), Positives = 60/78 (76%)
 Frame = +3

Query: 33  ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 212
           ++  K+++GNL WSC+++ L  VF + GSV   +V+YD+++G+SRGFGFVTMS+  + + 
Sbjct: 111 DNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSN 170

Query: 213 AIEKLDGADYAGRTLRVN 266
           A++ LDGA++ GR +RV+
Sbjct: 171 AVQNLDGAEFEGREMRVS 188


>tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein
           (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 205

 Score =  199 bits (505), Expect = 2e-49
 Identities = 98/180 (54%), Positives = 134/180 (74%), Gaps = 3/180 (1%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+   AIE+
Sbjct: 22  KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLF 395
            +G  + GR LRVN       D   PR+PR   +N   SNKL+VGNLAWGVD+  L +LF
Sbjct: 82  FNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLF 141

Query: 396 SEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
           SE G VL+A+V+ DRE+GRSRGFGFVT  +  EVN A++ +DG  ++GR +RV +A  +P
Sbjct: 142 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 201



 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = +3

Query: 9   RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
           R  G  F +S  KLYVGNL W  ++  L  +F + G+V   +VIYD+ESGRSRGFGFVT 
Sbjct: 111 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 169

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRV 263
            S E+ N AI  LDG D  GR +RV
Sbjct: 170 GSAEEVNNAISNLDGVDLDGRQIRV 194


>tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subsp.
           japonica GN=P0519E12.113 PE=4 SV=1
          Length = 264

 Score =  198 bits (504), Expect = 2e-49
 Identities = 97/180 (53%), Positives = 134/180 (74%), Gaps = 3/180 (1%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+   A+E+
Sbjct: 81  KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLF 395
            +G  + GR LRVN       D   PR+PR   +N   SNKL+VGNLAWGVD+  L +LF
Sbjct: 141 FNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLF 200

Query: 396 SEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
           SE G VL+A+V+ DRE+GRSRGFGFVT  +  EVN A++ +DG  ++GR +RV +A  +P
Sbjct: 201 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 260



 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = +3

Query: 9   RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
           R  G  F +S  KLYVGNL W  ++  L  +F + G+V   +VIYD+ESGRSRGFGFVT 
Sbjct: 170 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 228

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRV 263
            S E+ N AI  LDG D  GR +RV
Sbjct: 229 GSAEEVNNAISNLDGVDLDGRQIRV 253


>tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 299

 Score =  198 bits (504), Expect = 2e-49
 Identities = 97/185 (52%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           K++VGNLPWS +S ELA +F+  G V MVEVIYD+++GRSRGF FVTM++  D + A+EK
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRA------PRMDQNNSNKLFVGNLAWGVDDGMLH 386
            +G +Y GRTLRVN       D+  PR       P  + N++N++FVGNL WG DD  L 
Sbjct: 174 FNGYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLE 233

Query: 387 DLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAG 566
            LFS+HGKV+EA+VV DRETGRSRGFGFVT+S+  E+ +A++ +DG+ ++GR ++V +A 
Sbjct: 234 QLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISSLDGSDMDGRQIKVTLAE 293

Query: 567 ERPSS 581
            +P+S
Sbjct: 294 TKPAS 298



 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
 Frame = +3

Query: 15  NGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
           N  P G   S  +++VGNLPW  +   L  +F   G V   +V+YD+E+GRSRGFGFVT+
Sbjct: 205 NEKPSGNYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTL 264

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRV 263
           SS ++   AI  LDG+D  GR ++V
Sbjct: 265 SSPQEIEEAISSLDGSDMDGRQIKV 289


>tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26976 PE=4 SV=1
          Length = 259

 Score =  198 bits (504), Expect = 2e-49
 Identities = 97/180 (53%), Positives = 134/180 (74%), Gaps = 3/180 (1%)
 Frame = +3

Query: 45  KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 224
           K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+   A+E+
Sbjct: 76  KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135

Query: 225 LDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN---SNKLFVGNLAWGVDDGMLHDLF 395
            +G  + GR LRVN       D   PR+PR   +N   SNKL+VGNLAWGVD+  L +LF
Sbjct: 136 FNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLF 195

Query: 396 SEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 575
           SE G VL+A+V+ DRE+GRSRGFGFVT  +  EVN A++ +DG  ++GR +RV +A  +P
Sbjct: 196 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 255



 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = +3

Query: 9   RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
           R  G  F +S  KLYVGNL W  ++  L  +F + G+V   +VIYD+ESGRSRGFGFVT 
Sbjct: 165 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 223

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRV 263
            S E+ N AI  LDG D  GR +RV
Sbjct: 224 GSAEEVNNAISNLDGVDLDGRQIRV 248


>tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 264

 Score =  197 bits (502), Expect = 3e-49
 Identities = 101/192 (52%), Positives = 144/192 (75%), Gaps = 3/192 (1%)
 Frame = +3

Query: 9   RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 188
           R  G  F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTM
Sbjct: 73  RSGGDEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 131

Query: 189 SSVEDCNTAIEKLDGADYAGRTLRVNF---PNRNRGDAPTPRAPRMDQNNSNKLFVGNLA 359
           SSVE+   A+++ +G    GR+LRVN    P R+R  +P+P+ PR D   +N+++VGNL+
Sbjct: 132 SSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRS-SPSPQRPRGD---ANRVYVGNLS 187

Query: 360 WGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEG 539
           WGVD+  L +LFSE G+VLEAR++ DRE+GRSRGFGFVT  +  EV  A++ +DGA ++G
Sbjct: 188 WGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDG 247

Query: 540 RNLRVNMAGERP 575
           R +RV +A  +P
Sbjct: 248 RQIRVTVAESKP 259



 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 40/84 (47%), Positives = 54/84 (64%)
 Frame = +3

Query: 336 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 515
           ++FVGNL + VD   L  LF + G V    V+ D+ TGRSRGFGFVTMS+  EV  A+++
Sbjct: 84  RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 143

Query: 516 MDGAAIEGRNLRVNMAGERPSSRS 587
            +G  ++GR+LRVN     P  RS
Sbjct: 144 FNGYVLDGRSLRVNSGPPPPRDRS 167


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 268

 Score =  197 bits (501), Expect = 5e-49
 Identities = 100/196 (51%), Positives = 138/196 (70%), Gaps = 8/196 (4%)
 Frame = +3

Query: 12  DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 191
           D    F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70  DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 192 SVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMD--------QNNSNKLFV 347
           S E+   A+E+ +G  + GR LRVN       D  TPRAPR           +++NK++V
Sbjct: 129 SAEEAEAAVEQFNGYAFQGRQLRVNCGPPPPRDESTPRAPRGGGGGGGGGFVDSANKVYV 188

Query: 348 GNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGA 527
           GNLAWGVD+  L +LFSE G+VL+A+V+ DR++GRSRGFGFVT  +  EVN A++ +DG 
Sbjct: 189 GNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEVNNAISNLDGI 248

Query: 528 AIEGRNLRVNMAGERP 575
            ++GR +RV  A  +P
Sbjct: 249 DLDGRQIRVTAAESKP 264



 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 43/84 (51%), Positives = 50/84 (59%)
 Frame = +3

Query: 336 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 515
           KLFVGNL + VD   L  LF + G V    VV DR TGRSRGFGFVTMS+  E   A+ +
Sbjct: 80  KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAEAAVEQ 139

Query: 516 MDGAAIEGRNLRVNMAGERPSSRS 587
            +G A +GR LRVN     P   S
Sbjct: 140 FNGYAFQGRQLRVNCGPPPPRDES 163