DK951229 |
Clone id |
TST38A01NGRL0010_N11 |
Library |
TST38 |
Length |
642 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_N11. 5' end sequence. |
Accession |
DK951229 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2391Contig1 |
Sequence |
GTGCGATCAGACAGCCTGTATGCAGATTCAGAGTTGTATGCTTTCTCGGTCTTTGCATCT CCCAAGCAAGGTGTTACCTTGCGCGTATCCTCCTCATCCATCTCCTCATATCGGGGGTGT TTTTGACTGCTGGTCTTGGTGTGAGGACGTCTATCTTTTTCGCTTAGAAGACAAGATCCT TTCTAGTATAAAGAAGTCAAAGGTTCCAAACTGATCGGCGGTTGAAATGGCCTTTTTAAA CATTGGTGCTAGCAACAAGGATGATGCCTTTTACAGGTACAAGATGCCTAGGCTCATCAC AAAGGTAGAAGGTCGGGGAAATGGTATCAAAACTAATCTTGTCAACATGGTTGACGTTGC CAAAGCCTTGGCTAGGCCTCCTTCCTACACAACCAAGTTTTTTGGGTGTGAGCTAGGTGC ACAATCCAAGTTTGATGAAAAGACAGGGACTTCTATTGTAAATGGGGCCCATGACACTAC CAAACTTGCTGGGTTGCTTGAGAACTTTATAAAAAAGTATGTCCAGTGTTATGGATGTGG GAATCCAGAGACAGAAATTATTATCACTAAGAGTCAGTTGATCAATCTGAAGTGTGCAGC ATGTGGTTTTGTTTCCGATGTTGACATGCGGGACAAGCTGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P55876 |
Definition |
sp|P55876|IF5_MAIZE Eukaryotic translation initiation factor 5 OS=Zea mays |
Align length |
138 |
Score (bit) |
255.0 |
E-value |
2.0e-67 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5Z4V2 |
Definition |
tr|Q5Z4V2|Q5Z4V2_ORYSJ cDNA, clone: J100063D05, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
138 |
Score (bit) |
260.0 |
E-value |
4.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951229|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_N11, 5' (642 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5Z4V2|Q5Z4V2_ORYSJ cDNA, clone: J100063D05, full insert sequ... 260 4e-68 tr|A2YGM5|A2YGM5_ORYSI Putative uncharacterized protein OS=Oryza... 260 4e-68 tr|Q6K2P9|Q6K2P9_ORYSJ Os09g0326900 protein OS=Oryza sativa subs... 258 2e-67 tr|A2YZW8|A2YZW8_ORYSI Putative uncharacterized protein OS=Oryza... 258 2e-67 tr|A5AT95|A5AT95_VITVI Putative uncharacterized protein OS=Vitis... 256 6e-67 tr|A9SM65|A9SM65_PHYPA Predicted protein OS=Physcomitrella paten... 256 8e-67 tr|A7NV57|A7NV57_VITVI Chromosome chr18 scaffold_1, whole genome... 256 8e-67 tr|A3RCW1|A3RCW1_WHEAT Translation initiation factor eIF5 OS=Tri... 255 1e-66 tr|B6T7C2|B6T7C2_MAIZE Eukaryotic translation initiation factor ... 255 2e-66 tr|A9U5A9|A9U5A9_PHYPA Predicted protein (Fragment) OS=Physcomit... 254 4e-66 tr|Q014M0|Q014M0_OSTTA Eukaryotic initiation factor 5 (ISS) OS=O... 199 1e-49 tr|A4S0M8|A4S0M8_OSTLU Predicted protein OS=Ostreococcus lucimar... 195 2e-48 tr|B8P2T9|B8P2T9_9APHY Eukaryotic translation initiation factor ... 170 8e-41 tr|B7FIR2|B7FIR2_MEDTR Putative uncharacterized protein OS=Medic... 169 1e-40 tr|A8HYM2|A8HYM2_CHLRE Eukaryotic initiation factor OS=Chlamydom... 169 1e-40 tr|Q4S6F3|Q4S6F3_TETNG Chromosome 10 SCAF14728, whole genome sho... 163 9e-39 tr|Q7ZWA9|Q7ZWA9_DANRE Eukaryotic translation initiation factor ... 161 3e-38 tr|Q5RG39|Q5RG39_DANRE Novel protein (Zgc:77026) (Fragment) OS=D... 161 3e-38 tr|B0D5S3|B0D5S3_LACBS Predicted protein OS=Laccaria bicolor (st... 161 3e-38 tr|Q0ZB74|Q0ZB74_BOMMO Eukaryotic translation initiation factor ... 160 6e-38 tr|B5X1Q6|B5X1Q6_SALSA Eukaryotic translation initiation factor ... 159 1e-37 tr|B5X0R9|B5X0R9_SALSA Eukaryotic translation initiation factor ... 159 1e-37 tr|Q5ZIE0|Q5ZIE0_CHICK Putative uncharacterized protein OS=Gallu... 159 1e-37 tr|Q8AVM2|Q8AVM2_XENLA Eif5-prov protein OS=Xenopus laevis GN=ei... 159 2e-37 tr|Q1A4T6|Q1A4T6_9BBAC Putative uncharacterized protein OS=Chori... 159 2e-37 tr|Q66II6|Q66II6_XENTR Eif5 protein OS=Xenopus tropicalis GN=eif... 158 3e-37 tr|B5X401|B5X401_SALSA Eukaryotic translation initiation factor ... 158 3e-37 tr|Q8BVV6|Q8BVV6_MOUSE Putative uncharacterized protein OS=Mus m... 158 3e-37 tr|Q6PHA6|Q6PHA6_MOUSE Eif5 protein (Fragment) OS=Mus musculus G... 158 3e-37 tr|Q3TT65|Q3TT65_MOUSE Putative uncharacterized protein (Fragmen... 158 3e-37
>tr|Q5Z4V2|Q5Z4V2_ORYSJ cDNA, clone: J100063D05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0545E05.8 PE=2 SV=1 Length = 450
Score = 260 bits (665), Expect = 4e-68 Identities = 121/138 (87%), Positives = 133/138 (96%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGASN+DDAFYRYKMPR+ITK+EGRGNGIKTN+VNMVD+AKALARP SYTTK+FG Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSKFDEKTGTS+VNGAHDT KLAGLLENFIKKYVQCYGCGNPETE++I+K+Q+I Sbjct: 61 CELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEVLISKAQMIT 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACGFVSDVDMRDKL Sbjct: 121 LKCAACGFVSDVDMRDKL 138
>tr|A2YGM5|A2YGM5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24333 PE=4 SV=1 Length = 450
Score = 260 bits (665), Expect = 4e-68 Identities = 121/138 (87%), Positives = 133/138 (96%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGASN+DDAFYRYKMPR+ITK+EGRGNGIKTN+VNMVD+AKALARP SYTTK+FG Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSKFDEKTGTS+VNGAHDT KLAGLLENFIKKYVQCYGCGNPETE++I+K+Q+I Sbjct: 61 CELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEVLISKAQMIT 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACGFVSDVDMRDKL Sbjct: 121 LKCAACGFVSDVDMRDKL 138
>tr|Q6K2P9|Q6K2P9_ORYSJ Os09g0326900 protein OS=Oryza sativa subsp. japonica GN=P0706E03.4-1 PE=2 SV=1 Length = 450
Score = 258 bits (659), Expect = 2e-67 Identities = 120/138 (86%), Positives = 132/138 (95%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGASN+DDAFYRYKMPR+ITK+EGRGNGIKTN+VNMVD+AKALARP SYTTK+FG Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSKFDEKTG S+VNGAHDT KLAGLLENFIKKYVQCYGCGNPETE++I+K+Q+I Sbjct: 61 CELGAQSKFDEKTGISLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEVLISKTQMIT 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACGFVSDVDMRDKL Sbjct: 121 LKCAACGFVSDVDMRDKL 138
>tr|A2YZW8|A2YZW8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30903 PE=4 SV=1 Length = 450
Score = 258 bits (659), Expect = 2e-67 Identities = 120/138 (86%), Positives = 132/138 (95%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGASN+DDAFYRYKMPR+ITK+EGRGNGIKTN+VNMVD+AKALARP SYTTK+FG Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSKFDEKTG S+VNGAHDT KLAGLLENFIKKYVQCYGCGNPETE++I+K+Q+I Sbjct: 61 CELGAQSKFDEKTGISLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEVLISKTQMIT 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACGFVSDVDMRDKL Sbjct: 121 LKCAACGFVSDVDMRDKL 138
>tr|A5AT95|A5AT95_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030619 PE=4 SV=1 Length = 459
Score = 256 bits (655), Expect = 6e-67 Identities = 119/138 (86%), Positives = 131/138 (94%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGA N+DDAFYRYKMP+++TK+EGRGNGIKTN+VNMVD+AKALARP SYTTK+FG Sbjct: 1 MALQNIGAGNRDDAFYRYKMPKMVTKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSKFDEKTG S+VNGAHDT KLAGLLENFIKKYVQCYGCGNPETEI+ITK+Q+I Sbjct: 61 CELGAQSKFDEKTGVSLVNGAHDTPKLAGLLENFIKKYVQCYGCGNPETEILITKTQMIQ 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACGFVSDVDMRDKL Sbjct: 121 LKCAACGFVSDVDMRDKL 138
>tr|A9SM65|A9SM65_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_186444 PE=4 SV=1 Length = 451
Score = 256 bits (654), Expect = 8e-67 Identities = 120/138 (86%), Positives = 132/138 (95%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGA N+DDAFYRYKMP+LITK+EGRGNGIKTN+VNMVDVAKALAR P+YTTK+FG Sbjct: 1 MALQNIGAGNRDDAFYRYKMPKLITKIEGRGNGIKTNVVNMVDVAKALARHPAYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSK+DEKTGTSIVNGAHDT+KLA LLENFIKKYVQCYGCGNPETE++ITK+QLI Sbjct: 61 CELGAQSKYDEKTGTSIVNGAHDTSKLASLLENFIKKYVQCYGCGNPETEVVITKTQLIT 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACG+VSDVDMRDKL Sbjct: 121 LKCAACGYVSDVDMRDKL 138
>tr|A7NV57|A7NV57_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015309001 PE=4 SV=1 Length = 363
Score = 256 bits (654), Expect = 8e-67 Identities = 120/138 (86%), Positives = 131/138 (94%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGA N+DDAFYRYKMP++ITK+EGRGNGIKTN+VNMVD+AKALARP SYTTK+FG Sbjct: 1 MALQNIGAGNRDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSKFDE+TGTS VNGAHDT KLAGLLENFIKKYVQCYGCGNPETEI+ITK+Q+I Sbjct: 61 CELGAQSKFDERTGTSHVNGAHDTPKLAGLLENFIKKYVQCYGCGNPETEIVITKTQMIT 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACGFVSDVDMRDKL Sbjct: 121 LKCAACGFVSDVDMRDKL 138
>tr|A3RCW1|A3RCW1_WHEAT Translation initiation factor eIF5 OS=Triticum aestivum PE=2 SV=1 Length = 454
Score = 255 bits (652), Expect = 1e-66 Identities = 118/138 (85%), Positives = 131/138 (94%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGASNKDDAFYRYKMPR++TK+EGRGNGIKTN+VNMVD+AKALARP SYTTK+FG Sbjct: 1 MALQNIGASNKDDAFYRYKMPRMLTKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSKFDEKTG S+VNGAHDT KLAGLLENFIKKYVQCYGCGNPETE++I+K ++I Sbjct: 61 CELGAQSKFDEKTGISLVNGAHDTLKLAGLLENFIKKYVQCYGCGNPETEVLISKKEMIT 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACGF+SDVDMRDKL Sbjct: 121 LKCAACGFLSDVDMRDKL 138
>tr|B6T7C2|B6T7C2_MAIZE Eukaryotic translation initiation factor 5 OS=Zea mays PE=2 SV=1 Length = 451
Score = 255 bits (651), Expect = 2e-66 Identities = 120/138 (86%), Positives = 132/138 (95%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGASN+DDAFYRYKMPR+ITK+EGRGNGIKTN+VNMVD+AKALARP SYTTK+FG Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSKFDEKTG S+VNGAHDT KLAGLLE FIKKYVQCYGCGNPETEI+I+K+Q+I+ Sbjct: 61 CELGAQSKFDEKTGISLVNGAHDTAKLAGLLEVFIKKYVQCYGCGNPETEILISKTQMIS 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACGFVSDVDMRDKL Sbjct: 121 LKCAACGFVSDVDMRDKL 138
>tr|A9U5A9|A9U5A9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_3880 PE=4 SV=1 Length = 444
Score = 254 bits (648), Expect = 4e-66 Identities = 119/138 (86%), Positives = 131/138 (94%) Frame = +2
Query: 227 MAFLNIGASNKDDAFYRYKMPRLITKVEGRGNGIKTNLVNMVDVAKALARPPSYTTKFFG 406 MA NIGA N+DDAFYRYKMP+LITK+EGRGNGIKTN+VNMVDVAKALAR P+YTTK+FG Sbjct: 1 MALQNIGAGNRDDAFYRYKMPKLITKIEGRGNGIKTNVVNMVDVAKALARNPAYTTKYFG 60
Query: 407 CELGAQSKFDEKTGTSIVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKSQLIN 586 CELGAQSK+DEKTGTSIVNGAHDT+KLA LLENFIKKYVQCYGC NPETE++ITK+QLI Sbjct: 61 CELGAQSKYDEKTGTSIVNGAHDTSKLASLLENFIKKYVQCYGCSNPETEVVITKTQLIT 120
Query: 587 LKCAACGFVSDVDMRDKL 640 LKCAACG+VSDVDMRDKL Sbjct: 121 LKCAACGYVSDVDMRDKL 138
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