BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951238|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_N21, 5'
         (622 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q59VP1|H2B2_CANAL Histone H2B.2 OS=Candida albicans GN=HTB2 P...    32   2.6  
sp|P48989|H2B1_CANAL Histone H2B.1 OS=Candida albicans GN=HTB1 P...    32   2.6  
sp|Q0V8T8|CTP5B_MOUSE Contactin associated protein like 5-2 OS=M...    30   7.7  

>sp|Q59VP1|H2B2_CANAL Histone H2B.2 OS=Candida albicans GN=HTB2 PE=3
           SV=3
          Length = 130

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = +1

Query: 373 KARKAGASKGKDRKEDWRKKSSSTDGLKRRVGTKASK 483
           KA K  ASK    K+   KK++STDG K+R  TKA K
Sbjct: 4   KAEKKPASKAPAEKKPAAKKTASTDGAKKR--TKARK 38


>sp|P48989|H2B1_CANAL Histone H2B.1 OS=Candida albicans GN=HTB1 PE=3
           SV=3
          Length = 130

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = +1

Query: 373 KARKAGASKGKDRKEDWRKKSSSTDGLKRRVGTKASK 483
           KA K  ASK    K+   KK++STDG K+R  TKA K
Sbjct: 4   KAEKKPASKAPAEKKPAAKKTASTDGAKKR--TKARK 38


>sp|Q0V8T8|CTP5B_MOUSE Contactin associated protein like 5-2 OS=Mus
            musculus GN=Cntnap5b PE=2 SV=1
          Length = 1292

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = -2

Query: 594  KCRLLSGSFPGCFGHLXXXXXXXXXXTWYIYIRRIIRLTCLCTHSPFQAICGRRFLSPIF 415
            + ++ SG  PGC GH              +   + I  TC CT+SP++    ++ +S +F
Sbjct: 932  RAKITSGVRPGCAGHCNSYGRNCQNGGKCV--EKHIGYTCDCTNSPYEGPFCKKEISALF 989

Query: 414  LS 409
             S
Sbjct: 990  YS 991

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951238|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_N21, 5'
         (622 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5B2X2|A5B2X2_VITVI Translation initiation factor IF-2 OS=Vit...    40   0.15 
tr|B0X4F4|B0X4F4_CULQU Pipsqueak OS=Culex quinquefasciatus GN=Cp...    36   2.1  
tr|A8XSR7|A8XSR7_CAEBR Putative uncharacterized protein OS=Caeno...    34   8.0  

>tr|A5B2X2|A5B2X2_VITVI Translation initiation factor IF-2 OS=Vitis
           vinifera GN=VITISV_024584 PE=3 SV=1
          Length = 1005

 Score = 39.7 bits (91), Expect = 0.15
 Identities = 41/139 (29%), Positives = 55/139 (39%), Gaps = 15/139 (10%)
 Frame = +1

Query: 250 VILKDIGAKDQGAG-----AGRXXXXXXXXXXXXXXXXXXXXXXXVKARKAGASKGKDR- 411
           VILKD+GA  + +G     +G+                        +A  A    GK   
Sbjct: 255 VILKDVGAAPKSSGIDETDSGKTRERKPILIDKFASKRPVVDPMIAQAVLAPPKPGKGPV 314

Query: 412 ----KEDWRKKSSSTDGLKRRV--GTKASKPDDAA---DVDIPGTAVGTRRGGRKMXXXX 564
               K+D+RKK++ST G +RR+        PDD     +V IPG A  T R GRK     
Sbjct: 315 PGKFKDDYRKKNASTGGSRRRMVAANDMEIPDDETSELNVSIPGAA--TARKGRKWSKAS 372

Query: 565 XXXXXXXXXXXXXPVKVDI 621
                        PVKV+I
Sbjct: 373 RKAARLQAAKDAAPVKVEI 391


>tr|B0X4F4|B0X4F4_CULQU Pipsqueak OS=Culex quinquefasciatus
           GN=CpipJ_CPIJ013751 PE=4 SV=1
          Length = 543

 Score = 35.8 bits (81), Expect = 2.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 535 YEFRQQYLVYLHPPHHQAYLPLYPLSFSSHLWKKISFAN 419
           ++ + Q ++YLHPP HQ ++ L       HL   +S+A+
Sbjct: 101 HQIQHQQIIYLHPPQHQQHVVLIDQHSQQHLHSPVSYAS 139


>tr|A8XSR7|A8XSR7_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG17990 PE=4 SV=1
          Length = 807

 Score = 33.9 bits (76), Expect = 8.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -1

Query: 499 PPHHQAYLPLYPLSFSSHLWKKISFANLPFCPSP 398
           PPH Q+Y P  P+SF++ + K+ S  ++   PSP
Sbjct: 235 PPHQQSYQPQEPMSFAACVRKQPSIESMSVSPSP 268