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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951239
Clone id TST38A01NGRL0010_N22
Library
Length 653
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_N22. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CTTTTCTCATCAACCGGGAGAAGGCCAACCTCCCCTTAGATAATCTCTGCTTTGCGCGCC
CGCAGAGTTTGTGTGTTTGTGCGGCGTGCTCGCGTGTGGTTGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGACCATGAACCTGCTTACCCAGTTTAAACTCTGCTTTCAATGC
CTTCCTGTTTTCTCCTCTGAGTCGCCTCCCCCTTCCCCACGCCCATTCTCAGCAGGAGCC
GTCGCAAACTCAGAAAAGGATGTGCATCTCCATGGCTCTGCGACGACTCCTCCGGTAAAG
GAAGGCGCAATTGCGCCAGAAGGCGAGACCCCATCTTTTTCTGATGCCTCTCTCACACAT
GACAATGAACAGAAAGATCTGCCCATTTCCCAGCAAGCAAAGGTTGAGCTTCTTGGTGCA
CCCGGTTCGCAGCATATTGCATCGCCCCTGGAAACTACATATTCCCCGAAAGGAGAGGAA
GGTAATGCTTCTAAGCAGCAGACTACCTCTGGATTGATGCCGCTTCCGTCTCCCATCTCT
CCGAGCCCCATCGGTTTGGGGTATATTGTCGGCGAGCATGCTTCTTCTCATCACATTCAT
CATCAGGTCAGCTCTCAACACCATGATGGGGGCCACTCATTCTTCCATTTACA
■■Homology search results ■■ -
sp_hit_id Q5SWP3
Definition sp|Q5SWP3|NACAD_MOUSE NAC-alpha domain-containing protein 1 OS=Mus musculus
Align length 100
Score (bit) 34.3
E-value 0.59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951239|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_N22, 5'
         (653 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5SWP3|NACAD_MOUSE NAC-alpha domain-containing protein 1 OS=M...    34   0.59 
sp|Q9C086|IN80B_HUMAN INO80 complex subunit B OS=Homo sapiens GN...    33   1.3  
sp|Q99PT3|IN80B_MOUSE INO80 complex subunit B OS=Mus musculus GN...    33   1.7  
sp|Q7Y1H8|IAA14_ORYSJ Auxin-responsive protein IAA14 OS=Oryza sa...    33   1.7  
sp|A7MJ10|MOAA_ENTS8 Molybdenum cofactor biosynthesis protein A ...    32   2.2  
sp|Q8N0Y2|ZN444_HUMAN Zinc finger protein 444 OS=Homo sapiens GN...    32   2.9  
sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1           32   3.8  
sp|Q0P5X1|LRIQ1_MOUSE IQ domain-containing protein LRRIQ1 OS=Mus...    32   3.8  
sp|A6T6M5|MOAA_KLEP7 Molybdenum cofactor biosynthesis protein A ...    31   6.5  
sp|Q6MG48|BAT2_RAT Large proline-rich protein BAT2 OS=Rattus nor...    31   6.5  
sp|Q7TSC1|BAT2_MOUSE Large proline-rich protein BAT2 OS=Mus musc...    31   6.5  
sp|Q8JZM8|MUC4_MOUSE Mucin-4 OS=Mus musculus GN=Muc4 PE=2 SV=1         30   8.5  

>sp|Q5SWP3|NACAD_MOUSE NAC-alpha domain-containing protein 1 OS=Mus
           musculus GN=Nacad PE=2 SV=1
          Length = 1504

 Score = 34.3 bits (77), Expect = 0.59
 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
 Frame = -1

Query: 494 LEALPSSPFGEYVVSRGDAICCEPGAPRSSTFACWEMGRSFCSLSCVREASEKD-----G 330
           L++ P+SP G Y+ + GD+    P                 CSLS +  A   D     G
Sbjct: 276 LDSTPASPSGSYITADGDSWASSPS----------------CSLSLLDPAEGLDFPSDWG 319

Query: 329 VSPSGAIAPSFTGGVVAEPWRCTSFSEFATAPAENGRGEG 210
           +SPSG++A        A P   +S S  +   + +   EG
Sbjct: 320 LSPSGSVADDLEPHPAAPPEPPSSESSLSADSSSSWSQEG 359


>sp|Q9C086|IN80B_HUMAN INO80 complex subunit B OS=Homo sapiens
           GN=INO80B PE=1 SV=1
          Length = 343

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 434 CCEPGAPRSSTFACWEMGRSFCSLSCVREASEKDGVSPSGAIAP 303
           C  PG P    +AC   G++ CSL C R   +     P G  +P
Sbjct: 296 CSVPGCPHPRRYACSRTGQALCSLQCYRINLQMRLGGPEGPGSP 339


>sp|Q99PT3|IN80B_MOUSE INO80 complex subunit B OS=Mus musculus
           GN=Ino80b PE=1 SV=1
          Length = 345

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 434 CCEPGAPRSSTFACWEMGRSFCSLSCVR 351
           C  PG P    +AC   G++ CSL C R
Sbjct: 298 CSVPGCPHPRRYACSRTGQALCSLQCYR 325


>sp|Q7Y1H8|IAA14_ORYSJ Auxin-responsive protein IAA14 OS=Oryza
           sativa subsp. japonica GN=IAA14 PE=2 SV=1
          Length = 195

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = -1

Query: 446 GDAICCEPGAPRSSTFACWEMGRSFCSLSCVREASEKDGVSPSGAIAPSFTGGVVAEPWR 267
           GD +  +     SST      G + C  +  R+   +DG SP+  +     G      +R
Sbjct: 20  GDGVAAKKRRSASSTVKSEASGTACCGGAGARDV--EDGASPASKV--QVVGWPPVGSYR 75

Query: 266 CTSFSEFATAPAENGRGEGGGDSEE 192
            ++F   +++ A   +G+GGG++++
Sbjct: 76  RSTFQSSSSSTAAAAKGKGGGETDQ 100


>sp|A7MJ10|MOAA_ENTS8 Molybdenum cofactor biosynthesis protein A
           OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=moaA
           PE=3 SV=1
          Length = 329

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 453 FQGRCNMLRTGCTKKLNLCLLGNGQIFLFIVMCERG 346
           F   CN LR     KL+LCL G+G + L  ++ E G
Sbjct: 256 FCASCNRLRVSSVGKLHLCLFGDGGVDLRDLLAEEG 291


>sp|Q8N0Y2|ZN444_HUMAN Zinc finger protein 444 OS=Homo sapiens
           GN=ZNF444 PE=1 SV=1
          Length = 327

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = -1

Query: 401 FACWEMGRSFCSLSCVREASEKDG---VSPSGAIAPSFTGGVVAEPW 270
           FACWE G+ F     V       G    S  GA+AP   GG    PW
Sbjct: 278 FACWECGKGFGRREHVLRHQRIHGRAAASAQGAVAPGPDGGGPFPPW 324


>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
          Length = 35213

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 241   VANSEKDVHLHGSATTPPVKEGAIAPEGETPSFSDASLTHDNEQKDLPISQQA 399
             V  +  DV LHGS ++  V+  A   E    SFS +S +   E K   +S Q+
Sbjct: 35024 VLKTSSDVSLHGSVSSQSVQMSASKQEASFSSFSSSSASSMTEMKFASMSAQS 35076


>sp|Q0P5X1|LRIQ1_MOUSE IQ domain-containing protein LRRIQ1 OS=Mus
           musculus GN=Lrriq1 PE=2 SV=1
          Length = 814

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +1

Query: 238 AVANSEKDVHLHGSATTPPVKEGAIAPEGETPSFSDASLTHDNEQKDLPISQ 393
           AV N++  VH  G A       G +AP  E  S S  +L    E +D P S+
Sbjct: 668 AVINADASVHTEGEADLQDSASGKLAPSEEAGSHSANNLLATEEVEDSPKSE 719


>sp|A6T6M5|MOAA_KLEP7 Molybdenum cofactor biosynthesis protein A
           OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC
           700721 / MGH 78578) GN=moaA PE=3 SV=1
          Length = 329

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -3

Query: 453 FQGRCNMLRTGCTKKLNLCLLGNGQIFLFIVMCE 352
           F   CN LR     KL+LCL G G + L  +M E
Sbjct: 256 FCATCNRLRVSSVGKLHLCLFGEGGVDLRDLMAE 289


>sp|Q6MG48|BAT2_RAT Large proline-rich protein BAT2 OS=Rattus
            norvegicus GN=Bat2 PE=1 SV=1
          Length = 2161

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
 Frame = +1

Query: 250  SEKDVHLHGSATTPPVKEGAIAP----EGETPSFSDAS--------LTHDNEQKDLPISQ 393
            S  D  L GSA  PP + G  +P     GE+ S S+ S         +H+ E+K+LP  Q
Sbjct: 1670 SSPDGGLKGSAEGPPRRPGGPSPLKAVPGESSSASEPSEPHRRRPPASHEGERKELPREQ 1729

Query: 394  QAKVELLGAPGSQ 432
                  +G   SQ
Sbjct: 1730 PLPPGPIGTERSQ 1742
tr_hit_id A6GH35
Definition tr|A6GH35|A6GH35_9DELT Putative lipoprotein OS=Plesiocystis pacifica SIR-1
Align length 47
Score (bit) 35.4
E-value 3.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951239|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_N22, 5'
         (653 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6GH35|A6GH35_9DELT Putative lipoprotein OS=Plesiocystis paci...    35   3.1  
tr|B8CF60|B8CF60_THAPS Predicted protein OS=Thalassiosira pseudo...    35   5.2  
tr|A9FXL7|A9FXL7_SORC5 Putative uncharacterized protein OS=Soran...    34   6.8  
tr|Q76K84|Q76K84_ARATH MADS-box protein (Fragment) OS=Arabidopsi...    34   6.8  
tr|Q766C0|Q766C0_ARATH MADS-box protein OS=Arabidopsis thaliana ...    34   6.8  
tr|Q295C4|Q295C4_DROPS GA19931 OS=Drosophila pseudoobscura pseud...    34   6.8  
tr|B0DXY5|B0DXY5_LACBS Predicted protein OS=Laccaria bicolor (st...    34   6.8  
tr|Q8PU81|Q8PU81_METMA Dipeptide/oligopeptide-binding protein OS...    34   6.8  
tr|Q2T102|Q2T102_BURTA PhoH family protein OS=Burkholderia thail...    34   8.9  
tr|B3MFC8|B3MFC8_DROAN GF12391 OS=Drosophila ananassae GN=GF1239...    34   8.9  
tr|A7TCV6|A7TCV6_NEMVE Predicted protein (Fragment) OS=Nematoste...    34   8.9  

>tr|A6GH35|A6GH35_9DELT Putative lipoprotein OS=Plesiocystis
           pacifica SIR-1 GN=PPSIR1_14285 PE=4 SV=1
          Length = 676

 Score = 35.4 bits (80), Expect = 3.1
 Identities = 19/47 (40%), Positives = 20/47 (42%)
 Frame = -1

Query: 497 CLEALPSSPFGEYVVSRGDAICCEPGAPRSSTFACWEMGRSFCSLSC 357
           C    P  P GE     GD   C+PG P S   AC   G  FC  SC
Sbjct: 573 CDPLAPDCPRGETCGRDGDTFVCQPGPPLSEGEAC---GGLFCGASC 616


>tr|B8CF60|B8CF60_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_11654 PE=4 SV=1
          Length = 818

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
 Frame = -1

Query: 464 EYVVSR-GDAICCEPGAPRSSTFACWEMGRSFCSLSCVREASEKDGVSPSGAIAPSFTGG 288
           E+V+S   +A+ C    PR    AC E    F S  C +  +     SPS + + S +  
Sbjct: 325 EWVISHCEEAVPC----PRGDAAACPENHACFASTPCTKAPTLTPTDSPSSSPSDSPSAS 380

Query: 287 VVAEPWRCTSFSEFATAPA-------ENGRGEGGGDSEEKTG 183
               PW  T+F EF            +N  G+   D  +K G
Sbjct: 381 PTKAPWSNTAFLEFLYGEETTDGSNNQNNDGQLASDVNDKLG 422


>tr|A9FXL7|A9FXL7_SORC5 Putative uncharacterized protein
           OS=Sorangium cellulosum (strain So ce56) GN=sce5364 PE=4
           SV=1
          Length = 311

 Score = 34.3 bits (77), Expect = 6.8
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = -1

Query: 371 CSLSCVREASEKDGVSPSGAIAPSFTGGVVAEPWRCTSFSEFATAPAENGRGEGGGDSEE 192
           C+L+   E+   +G +  GA  P+ +GG        +S +E AT+ A  G G GGG   E
Sbjct: 13  CALAACSESPADEGGAGGGA-GPAGSGGSGGAAEASSSAAEGATSSASTGAGAGGGGGGE 71

Query: 191 KTG 183
             G
Sbjct: 72  PEG 74


>tr|Q76K84|Q76K84_ARATH MADS-box protein (Fragment) OS=Arabidopsis
           thaliana GN=At1g69540 PE=2 SV=1
          Length = 318

 Score = 34.3 bits (77), Expect = 6.8
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 295 VKEGAIAPEGETPSFSDASLTHDNEQKDLPISQQAKVELLGAPGSQHIASPLETTYSPK- 471
           ++ G+I      P+   ++L+  N+QK   + Q A+  LLG+P   +++  LE +Y P+ 
Sbjct: 235 LETGSIPGTSADPNQQFSNLSFLNDQK---LKQLAEWNLLGSPADYYVSQILEASYKPQI 291

Query: 472 GEEGNASKQQT 504
           G + N +  +T
Sbjct: 292 GGKNNGASSET 302


>tr|Q766C0|Q766C0_ARATH MADS-box protein OS=Arabidopsis thaliana
           GN=At1g69540 PE=2 SV=1
          Length = 344

 Score = 34.3 bits (77), Expect = 6.8
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 295 VKEGAIAPEGETPSFSDASLTHDNEQKDLPISQQAKVELLGAPGSQHIASPLETTYSPK- 471
           ++ G+I      P+   ++L+  N+QK   + Q A+  LLG+P   +++  LE +Y P+ 
Sbjct: 261 LETGSIPGTSADPNQQFSNLSFLNDQK---LKQLAEWNLLGSPADYYVSQILEASYKPQI 317

Query: 472 GEEGNASKQQT 504
           G + N +  +T
Sbjct: 318 GGKNNGASSET 328


>tr|Q295C4|Q295C4_DROPS GA19931 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA19931 PE=4 SV=2
          Length = 951

 Score = 34.3 bits (77), Expect = 6.8
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 428 EPGAPRSSTFACWEMGRSFCSLSCVREASEKDGVSPSGAIAPS 300
           +P AP+  T  C E G+S+  L C   A+     SPS A +PS
Sbjct: 367 QPAAPQQ-TIRCAENGKSYLDLGCSSAAAAAGATSPSSAASPS 408


>tr|B0DXY5|B0DXY5_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_295769 PE=4 SV=1
          Length = 515

 Score = 34.3 bits (77), Expect = 6.8
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +1

Query: 277 SATTPPVKEGAIAPEGETPSFSDASLTHDNEQKDLPISQQAKVELLGAPGSQHIASPLET 456
           S  +PPV+   IAPE E     +       E +D+P + Q ++E   +  S  + S    
Sbjct: 207 SDLSPPVRADVIAPETEKVQEPETEKIQQVEPEDIPAAPQMQIERSNSTSSYEVVS---- 262

Query: 457 TYSPKGEEGNASKQQ 501
             +P+ EE   S Q+
Sbjct: 263 --APQEEEVQLSSQE 275


>tr|Q8PU81|Q8PU81_METMA Dipeptide/oligopeptide-binding protein
           OS=Methanosarcina mazei GN=MM_2460 PE=4 SV=1
          Length = 559

 Score = 34.3 bits (77), Expect = 6.8
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +1

Query: 259 DVHLHGSATTPPVKEGAIAPEGETPSFSDASLTHDNEQKDLPIS 390
           DV   G+  T  ++EG +  +GE  + +D   T D EQK++PIS
Sbjct: 108 DVSPDGTEYTVHLREGVVWSDGEPFTANDVKFTFDYEQKNVPIS 151


>tr|Q2T102|Q2T102_BURTA PhoH family protein OS=Burkholderia
           thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
           CIP 106301) GN=BTH_I0590 PE=4 SV=1
          Length = 358

 Score = 33.9 bits (76), Expect = 8.9
 Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
 Frame = -1

Query: 560 PKPMGLGEMGDGSGINPEVVCCLEALPSSPFGEYVVSRGDAICCEPGAPRSSTFACWEMG 381
           P+  G G  GDGSG  PEV       P  PF E VV  GD    +  AP+  T      G
Sbjct: 91  PRRNGNGN-GDGSG-QPEVDVRFRGDPDHPFDEPVVRIGDEPHADEAAPKLYTRRADLRG 148

Query: 380 RSFCSLSCVREASEKD---GVSPSG 315
           R+      +++    D   GV P+G
Sbjct: 149 RTPAQREYLKQILSHDVTFGVGPAG 173


>tr|B3MFC8|B3MFC8_DROAN GF12391 OS=Drosophila ananassae GN=GF12391
            PE=4 SV=1
          Length = 3047

 Score = 33.9 bits (76), Expect = 8.9
 Identities = 27/73 (36%), Positives = 31/73 (42%)
 Frame = -1

Query: 398  ACWEMGRSFCSLSCVREASEKDGVSPSGAIAPSFTGGVVAEPWRCTSFSEFATAPAENGR 219
            A    G S  SLS +  A    G  P G+I+ S  GG    P    S    A A   +G 
Sbjct: 816  AAGAQGNSLQSLSSITAALGGAGGMPGGSISGS--GGTSPSP---ASAGAGAGASGGSGS 870

Query: 218  GEGGGDSEEKTGR 180
            G GGG S  K GR
Sbjct: 871  GSGGGSSSYKEGR 883