DK951240 |
Clone id |
TST38A01NGRL0010_N23 |
Library |
TST38 |
Length |
681 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_N23. 5' end sequence. |
Accession |
DK951240 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
ACAAAACTCCTGGTTAGCTGCTGCTTGGTGCTATCGTCATGAAGGGGCATGAGCAGGACT AACAGACATGGGCGACAGTAGTCAAGGCAAGGTTATCTGCGCCATCTGCTACGAAGAGGC GAAACCATCCATCGAGGAGCTTCAGTCCATTTCTCTCTGTGGCCATGTCTTCCATGAGCT CTGCTTGCAGCAGTGGTTGGAATATTGCCCTCGTGGGAAGTTCACATGCCCCTTATGCAA ACAGCAGTGTGCAGATAAAGATGTACATCGATTGTACTTCCAGTCAGCTACAGAGGCAAC ACAGGCATGCCAAGAAAGCTGCTCTGGGCTGCCTTGCAATGGTGATGATGTTGGAGCTTT ACAGGCCACTGTCCATAAGCTTACTGGACAACTATTGGCTAACAAATCTTCGATGGAAGC TTATCAAGAACAACTTCAAGAGTCAAGCAAACAGCTTTCCCTTTGCATTCTCAGGGCAGA GAGAGCTGAATCTGATCAAGCAGAAGCCAACAAAGAGAAGTGCAGTCTGAAAGATACTGT CTCGCGAATACAAGAGGAACTTAAAAGGTCTACAGCAGAGCGCTGCANACTTCTTGAGAG GAATTCACTTTTAACAAAGGAACTCGCTTCAGTCAACTTGACACAGAATTTAGATGTTAA TGAAGATGATATAGCACGGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6PC78 |
Definition |
sp|Q6PC78|RN185_DANRE RING finger protein 185 OS=Danio rerio |
Align length |
83 |
Score (bit) |
49.7 |
E-value |
1.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1X1 |
Definition |
tr|A9U1X1|A9U1X1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
197 |
Score (bit) |
154.0 |
E-value |
7.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951240|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_N23, 5' (681 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U1X1|A9U1X1_PHYPA Predicted protein OS=Physcomitrella paten... 154 7e-36 tr|A7PZJ3|A7PZJ3_VITVI Chromosome chr15 scaffold_40, whole genom... 137 6e-31 tr|Q9M143|Q9M143_ARATH Putative RING zinc finger protein OS=Arab... 135 3e-30 tr|Q84VS3|Q84VS3_SOLTU Potyviral helper component protease-inter... 134 7e-30 tr|B7ZWX2|B7ZWX2_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|Q7EYI0|Q7EYI0_ORYSJ Os08g0151700 protein OS=Oryza sativa subs... 104 5e-21 tr|B8BAQ5|B8BAQ5_ORYSI Putative uncharacterized protein OS=Oryza... 104 5e-21 tr|A3BPP1|A3BPP1_ORYSJ Putative uncharacterized protein OS=Oryza... 103 1e-20 tr|A5B873|A5B873_VITVI Putative uncharacterized protein OS=Vitis... 73 2e-12 tr|O04606|O04606_ARATH A_IG002N01.19 protein OS=Arabidopsis thal... 75 3e-12 tr|B4KMP0|B4KMP0_DROMO GI19373 OS=Drosophila mojavensis GN=GI193... 59 3e-07 tr|B4LN04|B4LN04_DROVI GJ19929 OS=Drosophila virilis GN=GJ19929 ... 59 4e-07 tr|B4J4L9|B4J4L9_DROGR GH22143 OS=Drosophila grimshawi GN=GH2214... 58 6e-07 tr|Q7Q568|Q7Q568_ANOGA AGAP006611-PA OS=Anopheles gambiae GN=AGA... 56 2e-06 tr|Q7K1R6|Q7K1R6_DROME CG10916 OS=Drosophila melanogaster GN=CG1... 56 2e-06 tr|B4P5X2|B4P5X2_DROYA GE11812 OS=Drosophila yakuba GN=GE11812 P... 55 3e-06 tr|B3MBD9|B3MBD9_DROAN GF12143 OS=Drosophila ananassae GN=GF1214... 55 3e-06 tr|Q28YU7|Q28YU7_DROPS GA18686 OS=Drosophila pseudoobscura pseud... 55 4e-06 tr|B4QCA5|B4QCA5_DROSI GD11347 OS=Drosophila simulans GN=GD11347... 55 4e-06 tr|B4J5A9|B4J5A9_DROGR GH20284 OS=Drosophila grimshawi GN=GH2028... 55 4e-06 tr|B4HNK0|B4HNK0_DROSE GM21854 OS=Drosophila sechellia GN=GM2185... 55 4e-06 tr|B4GIP5|B4GIP5_DROPE GL17755 OS=Drosophila persimilis GN=GL177... 55 4e-06 tr|B4QCA3|B4QCA3_DROSI GD11346 OS=Drosophila simulans GN=GD11346... 55 5e-06 tr|B4LM06|B4LM06_DROVI GJ21206 OS=Drosophila virilis GN=GJ21206 ... 55 5e-06 tr|B4P4Q1|B4P4Q1_DROYA GE11933 OS=Drosophila yakuba GN=GE11933 P... 54 7e-06 tr|B4KLK6|B4KLK6_DROMO GI19455 OS=Drosophila mojavensis GN=GI194... 54 7e-06 tr|B4GIP3|B4GIP3_DROPE GL17754 OS=Drosophila persimilis GN=GL177... 54 7e-06 tr|B3NLR0|B3NLR0_DROER GG21854 OS=Drosophila erecta GN=GG21854 P... 54 7e-06 tr|B0WCA9|B0WCA9_CULQU Putative uncharacterized protein OS=Culex... 54 7e-06 tr|Q7K2X1|Q7K2X1_DROME No poles OS=Drosophila melanogaster GN=no... 54 9e-06
>tr|A9U1X1|A9U1X1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_100512 PE=4 SV=1 Length = 664
Score = 154 bits (388), Expect = 7e-36 Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 2/197 (1%) Frame = +2
Query: 95 ICAICYEEAKPSIEELQSISLCGHVFHELCLQQWLEYCPRG-KFTCPLCKQQCADKDVHR 271 IC ICYE+A+P E+LQSIS CGHVFHELCLQQW+EYCP G K TCPLCK+ C +DVHR Sbjct: 6 ICVICYEDARPLCEDLQSISACGHVFHELCLQQWIEYCPAGRKPTCPLCKKSCTSRDVHR 65
Query: 272 LYFQSA-TEATQACQESCSGLPCNGDDVGALQATVHKLTGQLLANKSSMEAYXXXXXXXX 448 LYFQSA ++TQ E+ + + V A + KL QL A K++++ Sbjct: 66 LYFQSAVNDSTQPPSENLQAPVADPNQVDNAPA-LRKLECQLAAAKTTLQNRNEQLKELD 124
Query: 449 XXXXXCILRAERAESDQAEANKEKCSLKDTVSRIQEELKRSTAERCXLLERNSLLTKELA 628 + RAE AE+ + K +++R QEELK ER L E+N + K+LA Sbjct: 125 SQVVANLRRAESAEAANVVVKELLVHCKKSLARAQEELKCCLNERATLQEKNQSMAKDLA 184
Query: 629 SVNLTQNLDVNEDDIAR 679 + L + D+ E++I R Sbjct: 185 AHKLVADTDLGEEEILR 201
>tr|A7PZJ3|A7PZJ3_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026900001 PE=4 SV=1 Length = 597
Score = 137 bits (345), Expect = 6e-31 Identities = 78/206 (37%), Positives = 117/206 (56%), Gaps = 2/206 (0%) Frame = +2
Query: 68 MGDSSQGKVICAICYEEAKPSIEELQSISLCGHVFHELCLQQWLEYCP-RGKFTCPLCKQ 244 +G S+ K IC ICYE+ KP +E+LQSIS+CGHVFHELCLQQW EYC + K +CP+CKQ Sbjct: 2 LGGSTFAKTICTICYEDLKPIVEDLQSISVCGHVFHELCLQQWFEYCANKKKNSCPVCKQ 61
Query: 245 QCADKDVHRLYFQSATEATQACQESCSGLPCN-GDDVGALQATVHKLTGQLLANKSSMEA 421 C+ V+RLYFQS +A+ + S P N +D GAL+ V +L ++ S +E Sbjct: 62 TCSLNGVNRLYFQSIGDAS---DPTLSQKPLNIEEDPGALRREVKRLEVKVAGLTSVLER 118
Query: 422 YXXXXXXXXXXXXXCILRAERAESDQAEANKEKCSLKDTVSRIQEELKRSTAERCXLLER 601 C + + + + E K+K ++ + ++L +S E L ER Sbjct: 119 NQKDLKELNEELCLCKEQFKEEAALKNEILKQKAFIQQLLFSKSQDLDKSNLECSRLQER 178
Query: 602 NSLLTKELASVNLTQNLDVNEDDIAR 679 N L KELA++ L +L ++E+ + + Sbjct: 179 NMALAKELAALKLVSDLSLDEEGVLK 204
>tr|Q9M143|Q9M143_ARATH Putative RING zinc finger protein OS=Arabidopsis thaliana GN=At4g01270 PE=2 SV=1 Length = 506
Score = 135 bits (339), Expect = 3e-30 Identities = 77/204 (37%), Positives = 113/204 (55%), Gaps = 2/204 (0%) Frame = +2
Query: 74 DSSQGKVICAICYEEAKPSIEELQSISLCGHVFHELCLQQWLEYCP-RGKFTCPLCKQQC 250 +++ G IC+ICYE+ KP +E LQSIS CGHVFHELCLQQW EYCP K CP+CKQ+C Sbjct: 4 ENAAGNAICSICYEDLKPVVENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICKQKC 63
Query: 251 ADKDVHRLYFQSATEATQA-CQESCSGLPCNGDDVGALQATVHKLTGQLLANKSSMEAYX 427 + KD RLYFQS+ T + + G+ +D L+ V +L G++ S++EA Sbjct: 64 SLKDPCRLYFQSSGNQTDSIASDKVVGIE---EDPVLLRGEVKRLEGKVQNLTSALEAKK 120
Query: 428 XXXXXXXXXXXXCILRAERAESDQAEANKEKCSLKDTVSRIQEELKRSTAERCXLLERNS 607 C + + + + EA +E + + + EE + ++ L ER Sbjct: 121 KENVEVSDKLHQCNEQLKEDKVKRWEALQEISTTQHLLKLKSEECIQLNSQCVKLQERTV 180
Query: 608 LLTKELASVNLTQNLDVNEDDIAR 679 L KELAS+ L +L + EDD+ + Sbjct: 181 ALAKELASLKLVSDLSLEEDDVLK 204
>tr|Q84VS3|Q84VS3_SOLTU Potyviral helper component protease-interacting protein 1 OS=Solanum tuberosum subsp. andigena GN=hip1 PE=2 SV=1 Length = 508
Score = 134 bits (336), Expect = 7e-30 Identities = 73/207 (35%), Positives = 120/207 (57%), Gaps = 3/207 (1%) Frame = +2
Query: 68 MGDSSQGKVICAICYEEAKPSIEELQSISLCGHVFHELCLQQWLEYCPRG-KFTCPLCKQ 244 +G +S GK IC+ICYE+ P IE+LQ++++CGHVFHELCLQQW EYC +G K CP+CKQ Sbjct: 2 VGVNSFGKTICSICYEDLNPIIEDLQAVTICGHVFHELCLQQWFEYCAKGKKKNCPVCKQ 61
Query: 245 QCADKDVHRLYFQSATEA--TQACQESCSGLPCNGDDVGALQATVHKLTGQLLANKSSME 418 C++++ +RLYFQS + T Q+ P +D L+ V +L +++ S++E Sbjct: 62 ACSEENANRLYFQSIGDPNFTSLTQKP----PDYKEDHRELKNEVKRLERKVVGLTSTLE 117
Query: 419 AYXXXXXXXXXXXXXCILRAERAESDQAEANKEKCSLKDTVSRIQEELKRSTAERCXLLE 598 C + + + EA K++ +++ + +EL +ST E L + Sbjct: 118 KQLKDLKDVNAELFTCKEELKMEMTLKIEAVKQEAAIQQLLHLKSKELDQSTLECIRLQD 177
Query: 599 RNSLLTKELASVNLTQNLDVNEDDIAR 679 RN L KELA++ L + ++ E+++ + Sbjct: 178 RNMALAKELATLKLVCDFNLEEEEVLK 204
>tr|B7ZWX2|B7ZWX2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 585
Score = 112 bits (280), Expect = 2e-23 Identities = 74/200 (37%), Positives = 105/200 (52%), Gaps = 5/200 (2%) Frame = +2
Query: 95 ICAICYEEAKP-SIEELQSISLCGHVFHELCLQQWLEYCPRG--KFTCPLCKQQC-ADKD 262 +C ICYE+ +P S + L + CGHVFH LCL+QWLEYCP G K TCP+CKQ C A Sbjct: 10 VCTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWLEYCPGGKKKRTCPVCKQPCGAAHP 69
Query: 263 VHRLYFQS-ATEATQACQESCSGLPCNGDDVGALQATVHKLTGQLLANKSSMEAYXXXXX 439 RLYF S T QAC G G D AL A V +L + + +E Sbjct: 70 PTRLYFSSTGTCPIQACPS--PGSASGGADPEALAAEVARLEQKAASLGKVVEEQRQSIN 127
Query: 440 XXXXXXXXCILRAERAESDQAEANKEKCSLKDTVSRIQEELKRSTAERCXLLERNSLLTK 619 +AE + A K+K S++ ++ EEL R T+E L E++ L K Sbjct: 128 DLKSEAAWLREQAEAGDFMLQAAKKDKESVQILLNAKTEELSRKTSECGRLQEKSLALAK 187
Query: 620 ELASVNLTQNLDVNEDDIAR 679 ELA++ L+ ++++ E++I + Sbjct: 188 ELAALKLSADMNLQEEEIMK 207
>tr|Q7EYI0|Q7EYI0_ORYSJ Os08g0151700 protein OS=Oryza sativa subsp. japonica GN=OJ1349_D05.105 PE=2 SV=1 Length = 586
Score = 104 bits (260), Expect = 5e-21 Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 11/206 (5%) Frame = +2
Query: 95 ICAICYEEAKP-SIEELQSISLCGHVFHELCLQQWLEYCPRG--KFTCPLCKQQC-ADKD 262 +C ICYE+ +P S + L + CGHVFH LCL+QWLEYCP G K TCP+CKQ C A Sbjct: 9 VCTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWLEYCPGGKKKLTCPICKQPCGAAHP 68
Query: 263 VHRLYFQSATEATQAC-QESCSGLPC------NGDDVGALQATVHKLTGQLLANKSSMEA 421 RL+FQS T AC ++ S P G D L A V +L + + ++ Sbjct: 69 PTRLFFQS----TGACPTQTASSSPSRHEPTDGGADRDELAAEVARLEQKAASLGRVLDE 124
Query: 422 YXXXXXXXXXXXXXCILRAERAESDQAEANKEKCSLKDTVSRIQEELKRSTAERCXLLER 601 +A AE + +EK ++ ++ EEL R ++E L E+ Sbjct: 125 QRDGIQKLNAEVAMWREKAAEAEVMKESVRREKECVQHLLNAKTEELSRKSSECGRLQEK 184
Query: 602 NSLLTKELASVNLTQNLDVNEDDIAR 679 L KELA++ L+ ++++ E++I + Sbjct: 185 GLSLAKELAALKLSTDMNLQEEEILK 210
>tr|B8BAQ5|B8BAQ5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27817 PE=4 SV=1 Length = 603
Score = 104 bits (260), Expect = 5e-21 Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 11/206 (5%) Frame = +2
Query: 95 ICAICYEEAKP-SIEELQSISLCGHVFHELCLQQWLEYCPRG--KFTCPLCKQQC-ADKD 262 +C ICYE+ +P S + L + CGHVFH LCL+QWLEYCP G K TCP+CKQ C A Sbjct: 9 VCTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWLEYCPGGKKKLTCPICKQPCGAAHP 68
Query: 263 VHRLYFQSATEATQAC-QESCSGLPC------NGDDVGALQATVHKLTGQLLANKSSMEA 421 RL+FQS T AC ++ S P G D L A V +L + + ++ Sbjct: 69 PTRLFFQS----TGACPTQTASSSPSRHEPTDGGADRDELAAEVARLEQKAASLGRVLDE 124
Query: 422 YXXXXXXXXXXXXXCILRAERAESDQAEANKEKCSLKDTVSRIQEELKRSTAERCXLLER 601 +A AE + +EK ++ ++ EEL R ++E L E+ Sbjct: 125 QRDGIQKLNAEVAMWREKAAEAEVMKESVRREKECVQHLLNAKTEELSRKSSECGRLQEK 184
Query: 602 NSLLTKELASVNLTQNLDVNEDDIAR 679 L KELA++ L+ ++++ E++I + Sbjct: 185 GLSLAKELAALKLSTDMNLQEEEILK 210
>tr|A3BPP1|A3BPP1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025013 PE=4 SV=1 Length = 603
Score = 103 bits (256), Expect = 1e-20 Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 22/217 (10%) Frame = +2
Query: 95 ICAICYEEAKP-SIEELQSISLCGHVFHELCLQQWLEYCPRG--KFTCPLCKQQC-ADKD 262 +C ICYE+ +P S + L + CGHVFH LCL+QWLEYCP G K TCP+CKQ C A Sbjct: 9 VCTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWLEYCPGGKKKLTCPICKQPCGAAHP 68
Query: 263 VHRLYFQSATEATQAC-QESCSGLPC------NGDDVGALQATVHKL------TGQLLAN 403 RL+FQS T AC ++ S P G D L A V +L G++L Sbjct: 69 PTRLFFQS----TGACPTQTASSSPSRHEPTDGGADRDELAAEVARLEQKAASLGRVLDE 124
Query: 404 K----SSMEAYXXXXXXXXXXXXXCI-LRAERAESDQAEANKEKCSLKDTVSRIQEELKR 568 + + A C+ +A AE + +EK ++ ++ EEL R Sbjct: 125 QRDGIQKLNAEASAAAGPPNLGGSCVGEKAAEAEVMKESVRREKECVQHLLNAKTEELSR 184
Query: 569 STAERCXLLERNSLLTKELASVNLTQNLDVNEDDIAR 679 ++E L E+ L KELA++ L+ ++++ E++I + Sbjct: 185 KSSECGRLQEKGLSLAKELAALKLSTDMNLQEEEILK 221
>tr|A5B873|A5B873_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015061 PE=4 SV=1 Length = 537
Score = 72.8 bits (177), Expect(2) = 2e-12 Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 2/164 (1%) Frame = +2
Query: 194 WLEYCP-RGKFTCPLCKQQCADKDVHRLYFQSATEATQACQESCSGLPCN-GDDVGALQA 367 W EYC + K +CP+CKQ C+ V+RLYFQS +A+ + S P N +D GAL+ Sbjct: 30 WFEYCANKKKNSCPVCKQTCSLNGVNRLYFQSIGDAS---DPTXSQKPLNIEEDPGALRR 86
Query: 368 TVHKLTGQLLANKSSMEAYXXXXXXXXXXXXXCILRAERAESDQAEANKEKCSLKDTVSR 547 V +L ++ S +E C + + + + E K+K ++ + Sbjct: 87 EVKRLEVKVAGLTSVLERNQKDLKELNEELCLCKEQFKEEAALKNEXLKQKAFIQQLLFS 146
Query: 548 IQEELKRSTAERCXLLERNSLLTKELASVNLTQNLDVNEDDIAR 679 ++L +S E L ERN L KELA++ L +L ++E+ + + Sbjct: 147 KSQDLDKSNLECSRLQERNMALAKELAALKLVSDLSLDEEGVLK 190
Score = 22.3 bits (46), Expect(2) = 2e-12 Identities = 9/24 (37%), Positives = 12/24 (50%) Frame = +1
Query: 97 LRHLLRRGETIHRGASVHFSLWPC 168 + LLRR + R +H L PC Sbjct: 1 MHDLLRRSQANRRRPPIHLRLRPC 24
>tr|O04606|O04606_ARATH A_IG002N01.19 protein OS=Arabidopsis thaliana GN=A_IG002N01.19 PE=4 SV=1 Length = 506
Score = 75.5 bits (184), Expect = 3e-12 Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 2/165 (1%) Frame = +2
Query: 191 QWLEYCPR-GKFTCPLCKQQCADKDVHRLYFQSATEATQA-CQESCSGLPCNGDDVGALQ 364 QW EYCP K CP+CKQ+C+ KD RLYFQS+ T + + G+ +D L+ Sbjct: 24 QWFEYCPSTNKRNCPICKQKCSLKDPCRLYFQSSGNQTDSIASDKVVGIE---EDPVLLR 80
Query: 365 ATVHKLTGQLLANKSSMEAYXXXXXXXXXXXXXCILRAERAESDQAEANKEKCSLKDTVS 544 V +L G++ S++EA C + + + + EA +E + + + Sbjct: 81 GEVKRLEGKVQNLTSALEAKKKENVEVSDKLHQCNEQLKEDKVKRWEALQEISTTQHLLK 140
Query: 545 RIQEELKRSTAERCXLLERNSLLTKELASVNLTQNLDVNEDDIAR 679 EE + ++ L ER L KELAS+ L +L + EDD+ + Sbjct: 141 LKSEECIQLNSQCVKLQERTVALAKELASLKLVSDLSLEEDDVLK 185
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