DK951246 |
Clone id |
TST38A01NGRL0010_O07 |
Library |
TST38 |
Length |
661 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_O07. 5' end sequence. |
Accession |
DK951246 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
AGAGAGATGGGTTTTCCTGGGCTTTCCAACGTTTCTGCTGGGCTCTTTGCAATCTTGATG ATCAACGCCGCCCTTTCCATGGCTGCCATCAAAGAGCTCTTCAACTCCGTTCTGCGGATC TTTGAAACCATGCCCCGCTGGCCCTTTGAAGGGGCCGATCCTGTCCTGGCAGTTCCGACC CATGACGATTCCCCTCTGAGCTCAAGCCTTGCTCTCCCCTCTATGTGGGATGAGATACGT GCATCTCTCCCTGTTTCCAGCTACGAGTCTTCTATGTGCGCAAGTGAAGAGCCCCTGGAT CACACGGTCCAGTGTGCGATATGCTTACTTGACTTTGCAGAAGGCGATGTCATACACAAG TTGCCACGATGTGATCATATATTTCATCAAGGATGCATATCGAAATGGCTAGATCACCAG CAGAACACATGCCCTCTTTGTAGATCTTCTCTCGTCTCAGAGGACCTCACCTGGCGATAC AGGAGACGTGAACAGGAGCTTGTAGAGGAGCTCATTCTCTGGTTTTCATCCTTCCATGGG TCTGCCTTTCATGGTCTCTGGTGGCAAGCTTGAGGGCTGCAAAGTAGCTGCGTGGATCCA TGTTGTGCTGCTTGATGGGCTAAATTTAGGGAGCTTGTCTCCAGCTCCCATATTGTTTTC A |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q940Q4 |
Definition |
sp|Q940Q4|ATL4K_ARATH RING-H2 finger protein ATL4K OS=Arabidopsis thaliana |
Align length |
100 |
Score (bit) |
68.6 |
E-value |
3.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NTT7 |
Definition |
tr|A9NTT7|A9NTT7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
188 |
Score (bit) |
129.0 |
E-value |
1.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951246|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_O07, 5' (661 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NTT7|A9NTT7_PICSI Putative uncharacterized protein OS=Picea... 129 1e-28 tr|A7PZM4|A7PZM4_VITVI Chromosome chr15 scaffold_40, whole genom... 84 6e-15 tr|Q8S2S3|Q8S2S3_THEHA Putative RING zinc finger protein-like pr... 82 4e-14 tr|A7Q2X1|A7Q2X1_VITVI Chromosome chr12 scaffold_47, whole genom... 78 6e-13 tr|A5ADW9|A5ADW9_VITVI Putative uncharacterized protein OS=Vitis... 78 6e-13 tr|B7FHG6|B7FHG6_MEDTR Putative uncharacterized protein OS=Medic... 77 7e-13 tr|A9PFZ2|A9PFZ2_POPTR Putative uncharacterized protein OS=Popul... 75 4e-12 tr|Q30D22|Q30D22_PONTR RING-H2 finger protein OS=Poncirus trifol... 75 5e-12 tr|Q6XNP9|Q6XNP9_HEVBR Putative C3HC4-type RING zinc finger prot... 74 8e-12 tr|B7FMU7|B7FMU7_MEDTR Putative uncharacterized protein OS=Medic... 74 8e-12 tr|Q9XF92|Q9XF92_ARATH BRH1 RING finger protein (Putative RING f... 73 2e-11 tr|Q6EPN1|Q6EPN1_ORYSJ Os02g0681200 protein OS=Oryza sativa subs... 72 3e-11 tr|A2X8C1|A2X8C1_ORYSI Putative uncharacterized protein OS=Oryza... 72 3e-11 tr|B6UCK3|B6UCK3_MAIZE Zinc finger, C3HC4 type family protein OS... 70 1e-10 tr|B6SJG4|B6SJG4_MAIZE Putative uncharacterized protein OS=Zea m... 70 2e-10 tr|Q5KQB3|Q5KQB3_ORYSJ Putative uncharacterized protein OSJNOa01... 69 3e-10 tr|B8AXG4|B8AXG4_ORYSI Putative uncharacterized protein OS=Oryza... 69 3e-10 tr|A3B124|A3B124_ORYSJ Putative uncharacterized protein OS=Oryza... 69 3e-10 tr|B6SGH7|B6SGH7_MAIZE RING zinc finger protein-like OS=Zea mays... 68 4e-10 tr|A5B787|A5B787_VITVI Putative uncharacterized protein OS=Vitis... 68 4e-10 tr|A3B348|A3B348_ORYSJ Putative uncharacterized protein OS=Oryza... 68 4e-10 tr|Q9FYK6|Q9FYK6_ARATH F21J9.24 OS=Arabidopsis thaliana PE=4 SV=1 68 6e-10 tr|Q3YI75|Q3YI75_ARALY At1g63840-like protein (Fragment) OS=Arab... 68 6e-10 tr|Q2HUC8|Q2HUC8_MEDTR Zinc finger, RING-type OS=Medicago trunca... 68 6e-10 tr|Q0E0C5|Q0E0C5_ORYSJ Os02g0559800 protein OS=Oryza sativa subs... 68 6e-10 tr|A3B975|A3B975_ORYSJ Putative uncharacterized protein OS=Oryza... 68 6e-10 tr|A3A822|A3A822_ORYSJ Putative uncharacterized protein OS=Oryza... 68 6e-10 tr|Q8L5A8|Q8L5A8_ORYSJ Putative uncharacterized protein B1011A07... 67 8e-10 tr|Q69Y58|Q69Y58_ORYSJ Putative Avr9/Cf-9 rapidly elicited prote... 67 8e-10 tr|Q0JNA3|Q0JNA3_ORYSJ Os01g0311400 protein OS=Oryza sativa subs... 67 8e-10
>tr|A9NTT7|A9NTT7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 189
Score = 129 bits (325), Expect = 1e-28 Identities = 72/188 (38%), Positives = 99/188 (52%), Gaps = 9/188 (4%) Frame = +1
Query: 25 SNVSAGLFAILMINAALSMAAIKELFNSVLRIFETM---------PRWPFEGADPVLAVP 177 + VS G+ IL++N ALS A IK++ S L+I P WP+ + Sbjct: 8 TTVSEGVLPILIVNTALSFAIIKDILRSFLQIVGLTTGTEPDFIDPSWPYPPENTPAVST 67
Query: 178 THDDXXXXXXXXXXXMWDEIRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEGDVIH 357 H + +EIR SLP+ ++S + V+CA+CL F EG I Sbjct: 68 GHSEAQFIA--------EEIRQSLPIKRFQSFTDGFVGSDNSHVECAVCLSKFEEGVEIR 119
Query: 358 KLPRCDHIFHQGCISKWLDHQQNTCPLCRSSLVSEDLTWRYRRREQELVEELILWFSSFH 537 +L C H+FH+ C+ KWLDHQQ TCPLCRS L+SE+ R REQEL +E + W SSF Sbjct: 120 QLTCC-HLFHRPCLDKWLDHQQITCPLCRSCLISEEAAKNIRLREQELTDESVFWCSSFQ 178
Query: 538 GSAFHGLW 561 +A+H W Sbjct: 179 EAAYHHTW 186
>tr|A7PZM4|A7PZM4_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026932001 PE=4 SV=1 Length = 167
Score = 84.3 bits (207), Expect = 6e-15 Identities = 34/85 (40%), Positives = 51/85 (60%) Frame = +1
Query: 235 IRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEGDVIHKLPRCDHIFHQGCISKWLD 414 IR LPV + ++C + P CA+CL DF G+ I +L C HIFH+ C+ +W+D Sbjct: 67 IREILPVMKFGEAVCGGDAP----ESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDRWMD 122
Query: 415 HQQNTCPLCRSSLVSEDLTWRYRRR 489 H Q TCPLCR+ V +++ + +R Sbjct: 123 HDQKTCPLCRTPFVPDEMQDEFNQR 147
>tr|Q8S2S3|Q8S2S3_THEHA Putative RING zinc finger protein-like protein OS=Thellungiella halophila PE=2 SV=1 Length = 164
Score = 81.6 bits (200), Expect = 4e-14 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 3/153 (1%) Frame = +1
Query: 7 MGFPGLSNVSAGLFAILMINAALSMAAIKELFNSVLRIFETMPRWPFEGADPVLA---VP 177 MG L S G+ ++++N ALS++ K + SVL + V A +P Sbjct: 1 MGLSSLPGPSEGMLCVILVNTALSISIFKGIVRSVLHVLGIRLSQSSSSPSSVTASSEIP 60
Query: 178 THDDXXXXXXXXXXXMWDEIRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEGDVIH 357 + + +E R P YES +C ++ D+ +C++CL F E I+ Sbjct: 61 ASEPFDFRVSHPESFL-EEFRNKTPTLRYES-LCRCKKHEDN--ECSVCLSKFEEDSEIN 116
Query: 358 KLPRCDHIFHQGCISKWLDHQQNTCPLCRSSLV 456 KL +C H+FH+ C+ KW+D+ TCPLCR+ LV Sbjct: 117 KL-KCGHLFHKTCLEKWIDYWNITCPLCRTPLV 148
>tr|A7Q2X1|A7Q2X1_VITVI Chromosome chr12 scaffold_47, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029063001 PE=4 SV=1 Length = 151
Score = 77.8 bits (190), Expect = 6e-13 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 1/156 (0%) Frame = +1
Query: 7 MGFPGLSNVSAGLFAILMINAALSMAAIKELFNSVLRIFET-MPRWPFEGADPVLAVPTH 183 MG L S G+ +L++N ALS++ K + ++L + + P P PT Sbjct: 1 MGLSSLPAPSEGVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPE---PTS 57
Query: 184 DDXXXXXXXXXXXMWDEIRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEGDVIHKL 363 + M +E R+ P +++ +C+ + P +H CA+CL F I+ L Sbjct: 58 EPFEFRRNPSETCM-EEFRSRNPAIRFDT-VCSCKRP-EH--DCAVCLTRFEPDSEINHL 112
Query: 364 PRCDHIFHQGCISKWLDHQQNTCPLCRSSLVSEDLT 471 P C H FH+ C+ KWLD+ TCPLCR+ L+ E+ T Sbjct: 113 P-CGHFFHKVCLEKWLDYWNITCPLCRTPLMPEEET 147
>tr|A5ADW9|A5ADW9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037474 PE=4 SV=1 Length = 223
Score = 77.8 bits (190), Expect = 6e-13 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 1/156 (0%) Frame = +1
Query: 7 MGFPGLSNVSAGLFAILMINAALSMAAIKELFNSVLRIFET-MPRWPFEGADPVLAVPTH 183 MG L S G+ +L++N ALS++ K + ++L + + P P PT Sbjct: 73 MGLSSLPAPSEGVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPE---PTS 129
Query: 184 DDXXXXXXXXXXXMWDEIRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEGDVIHKL 363 + M +E R+ P +++ +C+ + P +H CA+CL F I+ L Sbjct: 130 EPFEFRRNPSETCM-EEFRSRNPAIRFDT-VCSCKRP-EH--DCAVCLTRFEPDSEINHL 184
Query: 364 PRCDHIFHQGCISKWLDHQQNTCPLCRSSLVSEDLT 471 P C H FH+ C+ KWLD+ TCPLCR+ L+ E+ T Sbjct: 185 P-CGHFFHKVCLEKWLDYWNITCPLCRTPLMPEEET 219
>tr|B7FHG6|B7FHG6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 155
Score = 77.4 bits (189), Expect = 7e-13 Identities = 44/153 (28%), Positives = 71/153 (46%) Frame = +1
Query: 7 MGFPGLSNVSAGLFAILMINAALSMAAIKELFNSVLRIFETMPRWPFEGADPVLAVPTHD 186 MG L S G+ I+++N A+S++ K + ++L I + P Sbjct: 1 MGLSSLPAQSEGVLCIILVNTAMSISIFKGIIRTILHIVGIIAS-PSSSPSQDYIPQNIP 59
Query: 187 DXXXXXXXXXXXMWDEIRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEGDVIHKLP 366 + +E R+ P ++S + +EP +H C++CL F I+ Sbjct: 60 ESYEIHLSPSDDFVEEFRSRTPTLRFDSVCNSCKEP-EH--DCSVCLTQFEPESEINYCI 116
Query: 367 RCDHIFHQGCISKWLDHQQNTCPLCRSSLVSED 465 C H+FH+ C+ KWLD+ TCPLCRS L+ ED Sbjct: 117 SCGHVFHKVCLEKWLDYWNITCPLCRSPLIPED 149
>tr|A9PFZ2|A9PFZ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 133
Score = 75.1 bits (183), Expect = 4e-12 Identities = 37/85 (43%), Positives = 48/85 (56%) Frame = +1
Query: 310 QCAICLLDFAEGDVIHKLPRCDHIFHQGCISKWLDHQQNTCPLCRSSLVSEDLTWRYRRR 489 +CA+CL D EG+ I +L RC HIFH+ C+ +WLD +Q+TCPLCR SL R Sbjct: 52 ECAVCLSDVQEGEEIREL-RCGHIFHRACLYRWLDFRQSTCPLCRGSLTPR----RTLIL 106
Query: 490 EQELVEELILWFSSFHGSAFHGLWW 564 +Q E L F SF + WW Sbjct: 107 DQHQTEVLTFKFCSFTSTDERDTWW 131
>tr|Q30D22|Q30D22_PONTR RING-H2 finger protein OS=Poncirus trifoliata PE=2 SV=1 Length = 158
Score = 74.7 bits (182), Expect = 5e-12 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 7/159 (4%) Frame = +1
Query: 7 MGFPGLSNVSAGLFAILMINAALSMAAIKELFNSVLRIF-------ETMPRWPFEGADPV 165 MG + + S G+ ++++N A+ ++ +K +F S+L++ + P F V Sbjct: 1 MGLASMPSASEGMLCLILMNTAMPISIVKGIFRSILKVVGFQLAESSSTPYSYFASPQVV 60
Query: 166 LAVPTHDDXXXXXXXXXXXMWDEIRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEG 345 A P + +E R P YE+ + + D C++CL +F Sbjct: 61 SAEPYDVNLSPPLSYV-----EEFRNQNPAIKYETLLHCEDAEHD----CSVCLTEFEPQ 111
Query: 346 DVIHKLPRCDHIFHQGCISKWLDHQQNTCPLCRSSLVSE 462 I+ L C H+FH+ C+ KWLD+ TCPLCR+ L+ E Sbjct: 112 SDINNLS-CGHLFHKVCLEKWLDYLNVTCPLCRTPLIPE 149
>tr|Q6XNP9|Q6XNP9_HEVBR Putative C3HC4-type RING zinc finger protein OS=Hevea brasiliensis GN=RGZF1 PE=2 SV=1 Length = 156
Score = 73.9 bits (180), Expect = 8e-12 Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 5/153 (3%) Frame = +1
Query: 22 LSNVSA---GLFAILMINAALSMAAIKELFNSVLRIFETMPRWPFEGADPVLAVPTHDDX 192 LSN+ A G+ ++++N ALS++ K + SVL I + PF + + P + D Sbjct: 3 LSNLPASSEGVICVVVMNTALSISIFKGIVRSVLHIVDNRLA-PFSSSSSSILFPDYSDT 61
Query: 193 XXXXXXXXXX--MWDEIRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEGDVIHKLP 366 E+R+ P +++ + D C +CL+ F I+ L Sbjct: 62 ESFEFPLHSSDDCVRELRSRRPAKRFDAVSSCKQPQHD----CPVCLIQFKPDSEINCLS 117
Query: 367 RCDHIFHQGCISKWLDHQQNTCPLCRSSLVSED 465 C H+FH+ C+ KWLD+++ TCPLC+S ++ E+ Sbjct: 118 -CGHVFHKACLEKWLDYRKVTCPLCKSPVMPEE 149
>tr|B7FMU7|B7FMU7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 163
Score = 73.9 bits (180), Expect = 8e-12 Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 1/162 (0%) Frame = +1
Query: 7 MGFP-GLSNVSAGLFAILMINAALSMAAIKELFNSVLRIFETMPRWPFEGADPVLAVPTH 183 MGFP G + + LF L+++ I++L N++ R + +P + +P + P + Sbjct: 1 MGFPVGYTEL---LFPKLVLHLLSIFTFIRKLINTIFR-YMGLPDF----IEPDIIWPEN 52
Query: 184 DDXXXXXXXXXXXMWDEIRASLPVSSYESSMCASEEPLDHTVQCAICLLDFAEGDVIHKL 363 + IR LPV + E +D CA+CL +F E D I +L Sbjct: 53 STRIPEFESVSALL---IREILPVVKFM-------ELVDPPESCAVCLTEFEENDEIRRL 102
Query: 364 PRCDHIFHQGCISKWLDHQQNTCPLCRSSLVSEDLTWRYRRR 489 C +IFH+GC+ +W+ + Q TCPLCR+ + ++L + R Sbjct: 103 ANCRYIFHRGCLDRWMGYDQRTCPLCRTPFIPDELQSAFNER 144
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