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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951259
Clone id TST38A01NGRL0010_O21
Library
Length 636
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_O21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GACAGTTGCCCTCTTTGGCACCAAGACTCCCAAGAAGACAACTGGGTCCAAGCCTGCCCC
AAAGACGAAGGGAAAGGTTGAGGATGGCATTTTCGGGACCTCCGGTGGAATTGGCTTCAC
CAAGCAAAACGAGCTCTTTGTTGGCCGAGTCGCCATGCTTGGGTTTGCGGCCTCTATTCT
AGGTGAGGCCATCACAGGAAAGGGAACTCTTGCTCAATTCGACTTCGAGACAGGGTTGCC
ACTAACTGAGACAGAGCCCCTTCTCCTCTTCTTCTTGTTTACATTGCTGGGTGCTATTGG
AGCTCTTGGTGACCGAGGAAAGTTTGTGGATGATCCTGCCGAGCCCACTGGGCTTGACAG
GGCTGTTATTGCTCCCGGCAAGGGTGTGAAGTCAGCTCTCGGTCTGAAAGAGGGAGGGCC
AACCTTTGGATTCACAAAGTCAAATGAGTTGTTTGTGGGCAGAATGGCCCAATTGGGTAT
TGCTTTCTCCATCATTGGTGAGATCATCACAGGGAAGGGAACACTTGCTCAGTTGAACAT
TGAGACAGGCGTGCCCCTCACTGAAATTGAGCCCCTTGTTCTTGCATGGATCGCGTTCTT
CTTTGTAGCAGCGATCAATCCGGGTACGGGAAAGTT
■■Homology search results ■■ -
sp_hit_id P54773
Definition sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum
Align length 187
Score (bit) 234.0
E-value 4.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951259|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_O21, 5'
         (636 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...   234   4e-61
sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...   233   6e-61
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...   231   3e-60
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...   224   4e-58
sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...   218   2e-56
sp|A1C6X5|SEC31_ASPCL Protein transport protein sec31 OS=Aspergi...    40   0.010
sp|Q767L8|MDC1_PIG Mediator of DNA damage checkpoint protein 1 O...    40   0.013
sp|O64647|TCP9_ARATH Transcription factor TCP9 OS=Arabidopsis th...    39   0.030
sp|Q9HEC9|SEC16_NEUCR COPII coat assembly protein sec-16 OS=Neur...    39   0.030
sp|Q9ET54|PALLD_MOUSE Palladin OS=Mus musculus GN=Palld PE=1 SV=2      38   0.051
sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp....    37   0.066
sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BI...    37   0.086
sp|O43711|TLX3_HUMAN T-cell leukemia homeobox protein 3 OS=Homo ...    36   0.15 
sp|Q5RA07|GNL1_PONAB Guanine nucleotide-binding protein-like 1 O...    36   0.15 
sp|Q7YR35|GNL1_PANTR Guanine nucleotide-binding protein-like 1 O...    36   0.15 
sp|Q5TM59|GNL1_MACMU Guanine nucleotide-binding protein-like 1 O...    36   0.15 
sp|Q4R8D2|GNL1_MACFA Guanine nucleotide-binding protein-like 1 O...    36   0.15 
sp|P36915|GNL1_HUMAN Guanine nucleotide-binding protein-like 1 O...    36   0.15 
sp|O42854|YFHH_SCHPO SH3 domain-containing protein C23A1.17 OS=S...    36   0.19 
sp|O55144|TLX3_MOUSE T-cell leukemia homeobox protein 3 OS=Mus m...    36   0.19 
sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activate...    36   0.19 
sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophor...    35   0.25 
sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1           35   0.25 
sp|Q4WHP3|STE20_ASPFU Serine/threonine-protein kinase ste20 OS=A...    35   0.25 
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    35   0.32 
sp|Q3UGQ8|K0819_MOUSE Uncharacterized protein KIAA0819 OS=Mus mu...    35   0.33 
sp|A2AQH4|BCORL_MOUSE BCoR-like protein 1 OS=Mus musculus GN=Bco...    35   0.33 
sp|Q1LY77|SE1BA_DANRE Histone-lysine N-methyltransferase SETD1B-...    35   0.43 
sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated ...    35   0.43 
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    34   0.55 

>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score =  234 bits (596), Expect = 4e-61
 Identities = 127/187 (67%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKFVDDP  PTGL++AVI PGK  KSALGL EGGP FGF
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGF 201

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFSIIGEIITGKG LAQLN ETGVP+ EIEPL+L  IAFFF AA
Sbjct: 202 TKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAA 261

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 262 INPGTGK 268


>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score =  233 bits (594), Expect = 6e-61
 Identities = 127/187 (67%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGAL DRGKF+DDPA PTGLD+AVI PGKG KSALGL EGGP F F
Sbjct: 140 PLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPGKGFKSALGLSEGGPLFEF 199

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFSIIGEIITGKG LAQLN ETGVP+ EIEPL+L  I FFFVAA
Sbjct: 200 TKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAA 259

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 260 INPGTGK 266


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score =  231 bits (588), Expect = 3e-60
 Identities = 125/187 (66%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRG+F+DDPA  TGL++AVI PGK  KSALGL EGGP FGF
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVIPPGKSFKSALGLSEGGPLFGF 201

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFSIIGEIITGKG LAQLN ETGVP+ EIEPL+L  IAFFF AA
Sbjct: 202 TKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAA 261

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 262 INPGTGK 268


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score =  224 bits (570), Expect = 4e-58
 Identities = 122/187 (65%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE GP FGF
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLFGF 189

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFS+IGEIITGKG LAQLNIETG+P+ +IEPLVL  +AFFF AA
Sbjct: 190 TKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAA 249

Query: 614 INPGTGK 634
           INPG GK
Sbjct: 250 INPGNGK 256


>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score =  218 bits (556), Expect = 2e-56
 Identities = 119/187 (63%), Positives = 134/187 (71%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            K+NELFVGRVAM+GFAAS+LGE ITGKG L+Q +           
Sbjct: 81  VEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAE 140

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRG+FVD+P   TGL++AVI PGK V+SALGLK  GP FGF
Sbjct: 141 PLLLFFILFTLLGAIGALGDRGRFVDEPT--TGLEKAVIPPGKDVRSALGLKTKGPLFGF 198

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TKSNELFVGR+AQLG AFS+IGEIITGKG LAQLNIETGVP+ EIEPLVL  + FFF+AA
Sbjct: 199 TKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA 258

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 259 INPGTGK 265


>sp|A1C6X5|SEC31_ASPCL Protein transport protein sec31 OS=Aspergillus
            clavatus GN=sec31 PE=3 SV=1
          Length = 1276

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 49/186 (26%), Positives = 72/186 (38%), Gaps = 16/186 (8%)
 Frame = -1

Query: 579  TRGSISVRGTPVSMFN*ASVPFPVMISPMMEKAIPNWAILPTNNSFDFVNPKVG----PP 412
            T+   S RGTP +     S PFP   SP   +  P   + PT  +     P  G    P 
Sbjct: 955  TKPPTSRRGTPATAAAAISSPFPNQ-SPTFSQGPPPPGMPPTQRAPSVPPPPKGTVPPPR 1013

Query: 411  SFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPRAPI-------APSNVNKKKRRRGS 253
               P   FTP       LS+P  +A    + P+SP  PI       AP+++ +      +
Sbjct: 1014 VTSPPTGFTPASN----LSAPPPAANPYASLPQSP--PIGSTMGIPAPASIPRGPSPYNA 1067

Query: 252  VSVSGNPVSKSN*ARVPFPVMASPRIEAANPSMATR-----PTKSSFCLVKPIPPEVPKM 88
                  P ++            SP ++AA+P +ATR     P  ++     P P   P +
Sbjct: 1068 APTMPPPSNR---------YAPSPAVQAASPQLATRAAVPPPPPAAASPYAPQPAAQPPV 1118

Query: 87   PSSTFP 70
             SS  P
Sbjct: 1119 ASSYAP 1124


>sp|Q767L8|MDC1_PIG Mediator of DNA damage checkpoint protein 1 OS=Sus
            scrofa GN=MDC1 PE=3 SV=1
          Length = 2042

 Score = 39.7 bits (91), Expect = 0.013
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
 Frame = -1

Query: 396  ADFTPLPGAITALSSPVGSAGSSTNFPRSPRAPIAPSNVNKKKRRRGSVSVSGNPVSKSN 217
            ++ TP PGA       + SA ++   PRS       + V+ ++++RG ++    P  KS 
Sbjct: 953  SNLTPEPGAGVGYLQGLASAPAA---PRSQAGGGGEAPVSPRRQQRGDLNCKMPPAEKSG 1009

Query: 216  *ARVPFPVMASPRIEAANPS--MATRPTKSSFCLVKPIPPEVPKMPS 82
                  P + SP  +  +P   +   P ++S  L  P+P + PK P+
Sbjct: 1010 VRAAFSPSLPSPHGDQESPEACLPPEPPEASAPLQNPLPSQSPKHPA 1056


>sp|O64647|TCP9_ARATH Transcription factor TCP9 OS=Arabidopsis
           thaliana GN=TCP9 PE=2 SV=1
          Length = 356

 Score = 38.5 bits (88), Expect = 0.030
 Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
 Frame = -1

Query: 483 AIPNWAILPTNNSFDFVNPKVGPPSFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPR 304
           AIP+ A++PT  +F F+ P++  PS +P+      P A  + SS V +   ++   R P 
Sbjct: 222 AIPSNAMIPTVGAF-FLIPQIAGPSNQPQ--LLAFPAAAASPSSYVAAVQQASTMARPPP 278

Query: 303 APIAPSNVNKKKRRRGSVSVSGNPVSKSN*AR---VPFPVMASPRIEAANPSMATRPT 139
             + PS+        G VSVS   VS SN +R   V  P  +S     ++ S+AT  T
Sbjct: 279 LQVVPSS--------GFVSVS--DVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTT 326


>sp|Q9HEC9|SEC16_NEUCR COPII coat assembly protein sec-16
            OS=Neurospora crassa GN=sec-16 PE=3 SV=1
          Length = 2084

 Score = 38.5 bits (88), Expect = 0.030
 Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
 Frame = -1

Query: 429  PKVGPPSFRPRADFTPLPGAITALSS-PVGSAGSSTNFPR-------SPRAPIAPSNVNK 274
            P  GPPS    A   P+PG  +A+ S P  S       P        +P A I PS  + 
Sbjct: 724  PPAGPPSI---ASQPPVPGMPSAMGSVPNSSFTQHAEVPNLVAPPRVNPYASIQPSTTSL 780

Query: 273  KKRRRGSVSVSGNPV-SKSN*ARVPFPVMASPRIEAANPSMATRPTKSSFCLVKPIPPEV 97
                    S   +P  S  +    P P  A+ R   A P  A+RPT S +     +PP +
Sbjct: 781  APAVPAPASSRYSPAPSSGSQLSTPVPPAAASRYSPAPP--ASRPTSSGYTPTTSVPPVL 838

Query: 96   P 94
            P
Sbjct: 839  P 839


>sp|Q9ET54|PALLD_MOUSE Palladin OS=Mus musculus GN=Palld PE=1 SV=2
          Length = 1408

 Score = 37.7 bits (86), Expect = 0.051
 Identities = 54/183 (29%), Positives = 69/183 (37%), Gaps = 10/183 (5%)
 Frame = -1

Query: 528  ASVPFPVMISPMMEKAIPNWAILPTNNSFDFVNPKVGPPSFRPRADFTPLPGAITALSSP 349
            A+   PV   PM   A    A + ++ SF++  PK     F    +  P  G  T  SSP
Sbjct: 718  AACASPVPSEPMSALASRATA-MQSSGSFNYARPK----QFIAAQNLGPASGLPTPTSSP 772

Query: 348  VGSAGSSTNFPRSP------RAPIAPSNVNKKKRRRGSVSVSGNPVSKSN*ARVPFPVMA 187
               + SS   P SP      RAP  P    + +   G  S S  P         P P + 
Sbjct: 773  ---SSSSLPSPLSPTPRPFGRAPGPP--FVEPEAMWGPSSPSPPP---------PPPPVF 818

Query: 186  SPRIEAANPSMATRPTKSSFCLVKPIPPEVPKMPSST----FPFVFGAGLDPVVFLGVLV 19
            SP         A  P    F    P+PP  P +PSST     P  FG    P  FL  L+
Sbjct: 819  SPS--------AAYPVPDVF----PLPPPPPPLPSSTSHCASPARFGPSQTPAAFLSALL 866

Query: 18   PKR 10
            P +
Sbjct: 867  PSQ 869
tr_hit_id Q2LAH0
Definition tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component OS=Nicotiana benthamiana
Align length 187
Score (bit) 238.0
E-value 3.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951259|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_O21, 5'
         (636 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...   238   3e-61
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...   234   2e-60
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...   234   3e-60
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...   229   1e-58
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...   229   1e-58
tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...   228   2e-58
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...   228   3e-58
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...   228   3e-58
tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...   224   3e-57
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...   224   4e-57
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...   224   4e-57
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...   223   8e-57
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...   223   8e-57
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...   222   1e-56
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...   221   2e-56
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...   221   3e-56
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...   221   3e-56
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...   221   3e-56
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...   221   3e-56
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...   220   5e-56
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...   218   2e-55
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...   218   2e-55
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...   210   7e-53
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...   207   3e-52
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...   204   4e-51
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...   136   9e-31
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...   134   4e-30
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...   119   1e-25
tr|A8HPM2|A8HPM2_CHLRE Chloroplast photosystem II-associated 22 ...   119   1e-25
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...   107   5e-22

>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score =  238 bits (606), Expect = 3e-61
 Identities = 128/187 (68%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 83  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 142

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKF+DDP  PTGLD+AVI PGKG KSALGL EGGP FGF
Sbjct: 143 PLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLDKAVIPPGKGFKSALGLSEGGPLFGF 202

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFSIIGEIITGKG LAQLN ETGVP+ EIEPL+L  I FFFVAA
Sbjct: 203 TKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAA 262

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 263 INPGTGK 269


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score =  234 bits (598), Expect = 2e-60
 Identities = 127/187 (67%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKF+DDP   TGLD+AVI PGKG KSALGL EGGP FGF
Sbjct: 140 PLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAVIPPGKGFKSALGLSEGGPLFGF 199

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFSIIGEIITGKG LAQLN ETGVP+ EIEPL+L  I FFFVAA
Sbjct: 200 TKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAA 259

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 260 INPGTGK 266


>tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Solanum nigrum GN=PsbS PE=4 SV=1
          Length = 268

 Score =  234 bits (597), Expect = 3e-60
 Identities = 127/187 (67%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKFVDDPA PTGL++AVI PG+  KSALGL EGGP FGF
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPAPPTGLEKAVIPPGRSFKSALGLSEGGPLFGF 201

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFSIIGEIITGKG LAQLN ETGVP+ EIEPL+L  IAFFF AA
Sbjct: 202 TKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAA 261

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 262 INPGTGK 268


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
           hirsutum PE=4 SV=1
          Length = 278

 Score =  229 bits (583), Expect = 1e-58
 Identities = 123/187 (65%), Positives = 139/187 (74%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKFVD+P  PTG++ AVI PGKG++ ALGLKEGGP FGF
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGIEGAVIPPGKGIRGALGLKEGGPLFGF 202

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFS+IGEIITGKG LAQLNIETG+P+++IEPLVL  +AFFF AA
Sbjct: 203 TKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAA 262

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 263 INPGTGK 269


>tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossypium
           raimondii PE=4 SV=1
          Length = 278

 Score =  229 bits (583), Expect = 1e-58
 Identities = 123/187 (65%), Positives = 139/187 (74%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKFVD+P  PTG++ AVI PGKG++ ALGLKEGGP FGF
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGIEGAVIPPGKGIRGALGLKEGGPLFGF 202

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFS+IGEIITGKG LAQLNIETG+P+++IEPLVL  +AFFF AA
Sbjct: 203 TKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAA 262

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 263 INPGTGK 269


>tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein
           OS=Gossypioides kirkii PE=4 SV=1
          Length = 277

 Score =  228 bits (581), Expect = 2e-58
 Identities = 123/187 (65%), Positives = 139/187 (74%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRG+FVD+P  PTG++ AVI PGKGV+ ALGLKEGGP FGF
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGRFVDEP--PTGVEGAVIPPGKGVRGALGLKEGGPLFGF 202

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFS+IGEIITGKG LAQLNIETG+P+++IEPLVL  +AFFF AA
Sbjct: 203 TKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFAAA 262

Query: 614 INPGTGK 634
           INPGTGK
Sbjct: 263 INPGTGK 269


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score =  228 bits (580), Expect = 3e-58
 Identities = 131/212 (61%), Positives = 140/212 (66%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   TVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASIL 181
           TVALF                     ED            K+NELFVGRVAMLGFAASIL
Sbjct: 50  TVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASIL 109

Query: 182 GEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLD 358
           GEAITGKG LAQ +                        AIGALGDRG FVDD    TGLD
Sbjct: 110 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDDQPV-TGLD 168

Query: 359 RAVIAPGKGVKSALGLKEGGPTFGFTKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLN 538
           +AVIAPGKG +SALGL EGGP FGFTK+NELFVGR+AQLGIAFSIIGEIITGKG LAQLN
Sbjct: 169 KAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228

Query: 539 IETGVPLTEIEPLVLAWIAFFFVAAINPGTGK 634
           IETGVP+ EIEPLVL  + FFF+AAINPGTGK
Sbjct: 229 IETGVPINEIEPLVLFNVVFFFIAAINPGTGK 260


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score =  228 bits (580), Expect = 3e-58
 Identities = 131/212 (61%), Positives = 140/212 (66%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   TVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASIL 181
           TVALF                     ED            K+NELFVGRVAMLGFAASIL
Sbjct: 50  TVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASIL 109

Query: 182 GEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLD 358
           GEAITGKG LAQ +                        AIGALGDRG FVDD    TGLD
Sbjct: 110 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDDQPV-TGLD 168

Query: 359 RAVIAPGKGVKSALGLKEGGPTFGFTKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLN 538
           +AVIAPGKG +SALGL EGGP FGFTK+NELFVGR+AQLGIAFSIIGEIITGKG LAQLN
Sbjct: 169 KAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228

Query: 539 IETGVPLTEIEPLVLAWIAFFFVAAINPGTGK 634
           IETGVP+ EIEPLVL  + FFF+AAINPGTGK
Sbjct: 229 IETGVPINEIEPLVLFNVVFFFIAAINPGTGK 260


>tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein
           OS=Physcomitrella patens subsp. patens GN=PSBS PE=4 SV=1
          Length = 279

 Score =  224 bits (572), Expect = 3e-57
 Identities = 124/187 (66%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            K NELFVGRVAMLGFAASILGEA+TGKGTLAQFD           
Sbjct: 85  VEDGIFGTSGGIGFTKANELFVGRVAMLGFAASILGEALTGKGTLAQFDIETGIPLTETE 144

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKFVDD A   GLD  +I PGKGVK ALGL E GP FGF
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDD-APVAGLDSTIIKPGKGVKGALGLNEKGPVFGF 203

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TKSNELFVGR+AQLGIAF+IIGEIITGKG LAQLNIETGVP+TE+EPL+L  + FF  AA
Sbjct: 204 TKSNELFVGRLAQLGIAFAIIGEIITGKGALAQLNIETGVPITELEPLILFNVIFFLFAA 263

Query: 614 INPGTGK 634
           +NPGTGK
Sbjct: 264 VNPGTGK 270


>tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein
           (At1g44575/T18F15) OS=Arabidopsis thaliana PE=2 SV=1
          Length = 265

 Score =  224 bits (570), Expect = 4e-57
 Identities = 122/187 (65%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +2

Query: 77  VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 256
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 257 XXXXXXXXXXXX-AIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 433
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE GP FGF
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLFGF 189

Query: 434 TKSNELFVGRMAQLGIAFSIIGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAA 613
           TK+NELFVGR+AQLGIAFS+IGEIITGKG LAQLNIETG+P+ +IEPLVL  +AFFF AA
Sbjct: 190 TKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAA 249

Query: 614 INPGTGK 634
           INPG GK
Sbjct: 250 INPGNGK 256