DK951269 |
Clone id |
TST38A01NGRL0010_P08 |
Library |
TST38 |
Length |
611 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_P08. 5' end sequence. |
Accession |
DK951269 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1800Contig1 |
Sequence |
CCGGAAATTGCGACAAGCACAAGCTGAGAAGGAAGCAAAAATGCTGGCCTTGCAAAAGAA GCAACTGGAGGAAAGACAGAAGAAACTTGCACAAGCCAAGCAGGCTCAATCAGAAAAGCT TGTACAACAGCAGCAAGCTGTTGAGTCATGGGATAAGTTCTGGGATACAGCCTCTCGCAG TGAAGGGTTCCGTTTCATGCTGGGTATCTTGTTTTTCTGGCTTTTCTACCAGACTGTGGT GCTTGGTGTGAAAAAAAAGCGGAAGGACTATGAAGATCGCTTGAAGATTGAGAAGGCTGA AGAGGAAGAGCGGAAGAAGATGGAGGAGTGGGAGGATGAGGCTGATGCGGCAGAAGCCGT CTCAACAATTCAAGGCTGGGGTTCAGACAAGAAAAGCGAGGAAGAGAAGCAGCAGCAGGA GGAAGATGAGCAAAATCCTCAGCTCCAGATGGGTTTGCGTTTCATGCGGTCTGGTGCAAG GGTGCGTCGAGCGAAGGGTAAGAGGCCCCCAAAATATCTCGACCTCGATGCGGATGTGAG GTTTGAAGATGTGGCTGGGTTGGGTGAAATTCGACGAGAACTGGAGGAGATAGTTGATTT TTTCAAATATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O67077 |
Definition |
sp|O67077|FTSH_AQUAE Cell division protease ftsH homolog OS=Aquifex aeolicus |
Align length |
51 |
Score (bit) |
35.0 |
E-value |
0.29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951269|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_P08, 5' (598 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O67077|FTSH_AQUAE Cell division protease ftsH homolog OS=Aqui... 35 0.29 sp|P54580|Y2433_MYCLE Uncharacterized protein ML2433 OS=Mycobact... 32 2.4 sp|P32795|YME1_YEAST Protein YME1 OS=Saccharomyces cerevisiae GN... 32 3.2 sp|O59824|YME1_SCHPO Protein YME1 homolog OS=Schizosaccharomyces... 32 3.2 sp|Q9SD67|FTSH7_ARATH Cell division protease ftsH homolog 7, chl... 31 4.2 sp|P71377|FTSH1_HAEIN Cell division protease ftsH homolog 1 OS=H... 31 4.2 sp|Q1RGP0|FTSH_RICBR Cell division protease ftsH homolog OS=Rick... 30 7.1 sp|Q55700|FTSH1_SYNY3 Cell division protease ftsH homolog 1 OS=S... 30 7.1 sp|Q86WK9|MPRA_HUMAN Membrane progestin receptor alpha OS=Homo s... 30 9.2 sp|Q9SEX2|KTNA1_ARATH Katanin p60 ATPase-containing subunit OS=A... 30 9.3 sp|Q68XR9|FTSH_RICTY Cell division protease ftsH homolog OS=Rick... 30 9.3 sp|Q9ZEA2|FTSH_RICPR Cell division protease ftsH homolog OS=Rick... 30 9.3 sp|Q4UN68|FTSH_RICFE Cell division protease ftsH homolog OS=Rick... 30 9.3 sp|Q92JJ9|FTSH_RICCN Cell division protease ftsH homolog OS=Rick... 30 9.3 sp|Q9FIM2|FTSH9_ARATH Cell division protease ftsH homolog 9, chl... 30 9.3
>sp|O67077|FTSH_AQUAE Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1 Length = 634
Score = 35.0 bits (79), Expect = 0.29 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = +2
Query: 455 LRFMRSGARVRRAKG---KRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598 LR M G V RA R Y++ V F+DVAG+ E++ E++EI++ Sbjct: 122 LRQMSGGGNVNRAFNFGKSRAKVYIEEKPKVTFKDVAGIEEVKEEVKEIIE 172
>sp|P54580|Y2433_MYCLE Uncharacterized protein ML2433 OS=Mycobacterium leprae GN=ML2433 PE=4 SV=2 Length = 355
Score = 32.0 bits (71), Expect = 2.4 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Frame = -3
Query: 584 PVLVEFHPTQPHLQTSHPHRGRDILGASYPSLDAPLHQTA*N--ANPSGAEDFAHLPPAA 411 P++ + H + HL +H HR + P+ +PL A P +D H+PP Sbjct: 56 PIIHDDHADEQHLAATHAHRANIGVRVVEPAAQSPLEPVCEGIVAEPP-VDDHGHVPPGC 114
Query: 410 ASLP 399 S P Sbjct: 115 WSAP 118
>sp|P32795|YME1_YEAST Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1 Length = 747
Score = 31.6 bits (70), Expect = 3.2 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = +2
Query: 533 DVRFEDVAGLGEIRRELEEIVD 598 +V+F+DV G E R ELEEIVD Sbjct: 277 NVKFDDVCGCDEARAELEEIVD 298
>sp|O59824|YME1_SCHPO Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1 Length = 709
Score = 31.6 bits (70), Expect = 3.2 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = +2
Query: 533 DVRFEDVAGLGEIRRELEEIVD 598 +VRF DV G+ E + ELEEIVD Sbjct: 263 NVRFSDVQGVDEAKEELEEIVD 284
>sp|Q9SD67|FTSH7_ARATH Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1 Length = 802
Score = 31.2 bits (69), Expect = 4.2 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +2
Query: 479 RVRRAKGKRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598 R R+A G K + F DVAG+ E + ELEEIV+ Sbjct: 303 RTRKAGGPDGGKVSGGGETITFADVAGVDEAKEELEEIVE 342
>sp|P71377|FTSH1_HAEIN Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1 Length = 635
Score = 31.2 bits (69), Expect = 4.2 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +2
Query: 455 LRFMRSGARVRRAKGKRPPKYLDLDA-DVRFEDVAGLGEIRRELEEIVD 598 +R M+ G + GK K L+ D V F DVAG E + E+ EIVD Sbjct: 120 MRQMQGGGGKAMSFGKSRAKMLNQDQIKVTFADVAGCDEAKEEVGEIVD 168
>sp|Q1RGP0|FTSH_RICBR Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1 Length = 638
Score = 30.4 bits (67), Expect = 7.1 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +2
Query: 455 LRFMRSGARVRRAKGKRPPKYL-DLDADVRFEDVAGLGEIRRELEEIVD 598 +R M G + GK K L D + F+DVAG+ E + EL EIVD Sbjct: 125 MRQMHGGGKAM-GFGKSKAKLLSDKGPKITFKDVAGIDEAKDELTEIVD 172
>sp|Q55700|FTSH1_SYNY3 Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1 Length = 627
Score = 30.4 bits (67), Expect = 7.1 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2
Query: 497 GKRPPKY-LDLDADVRFEDVAGLGEIRRELEEIV 595 GK ++ +D V F+DVAG+ E + EL+E+V Sbjct: 155 GKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVV 188
>sp|Q86WK9|MPRA_HUMAN Membrane progestin receptor alpha OS=Homo sapiens GN=PAQR7 PE=2 SV=1 Length = 346
Score = 30.0 bits (66), Expect = 9.2 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -3
Query: 116 FLIEPAWLVQVSSVFPPVASF 54 + IEPAW QV +VF P+A+F Sbjct: 160 YAIEPAWHAQVQAVFLPMAAF 180
>sp|Q9SEX2|KTNA1_ARATH Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1 Length = 523
Score = 30.0 bits (66), Expect = 9.3 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2
Query: 518 LDLDADVRFEDVAGLGEIRRELEEIV 595 LD VR++DVAGL E +R LEE V Sbjct: 230 LDSTPGVRWDDVAGLSEAKRLLEEAV 255
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SCI8 |
Definition |
tr|A9SCI8|A9SCI8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
164 |
Score (bit) |
155.0 |
E-value |
2.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951269|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_P08, 5' (598 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SCI8|A9SCI8_PHYPA Predicted protein OS=Physcomitrella paten... 155 2e-36 tr|A7P762|A7P762_VITVI Chromosome chr9 scaffold_7, whole genome ... 97 9e-19 tr|A8MPR5|A8MPR5_ARATH Uncharacterized protein At3g16290.1 OS=Ar... 95 3e-18 tr|Q7U6X5|Q7U6X5_SYNPX Cell division protein FtsH4 OS=Synechococ... 37 0.67 tr|Q13XX4|Q13XX4_BURXL FtsH-2 peptidase. Metallo peptidase. MERO... 37 0.67 tr|Q30RT0|Q30RT0_SULDN Peptidase M41 OS=Sulfurimonas denitrifica... 37 0.87 tr|B4RB47|B4RB47_PHEZH Cell division protein FtsH OS=Phenylobact... 37 0.87 tr|B3S8F6|B3S8F6_TRIAD Predicted protein OS=Trichoplax adhaerens... 37 0.87 tr|Q1MC76|Q1MC76_RHIL3 Putative cell division protein FtsH OS=Rh... 37 1.1 tr|B5ZNL5|B5ZNL5_RHILW ATP-dependent metalloprotease FtsH OS=Rhi... 37 1.1 tr|B0ISW2|B0ISW2_RHILT ATP-dependent metalloprotease FtsH OS=Rhi... 37 1.1 tr|Q3AK06|Q3AK06_SYNSC ATP-dependent metalloprotease FtsH OS=Syn... 36 1.5 tr|Q9ZGE1|Q9ZGE1_HELMO ATP-dependent zinc metallopeptidase FtsH ... 36 1.5 tr|A8V262|A8V262_9AQUI Cell division protein FtsH OS=Hydrogenivi... 36 1.5 tr|A7TI20|A7TI20_VANPO Putative uncharacterized protein OS=Vande... 36 1.5 tr|Q6G5P6|Q6G5P6_BARHE Cell division protein ftsH OS=Bartonella ... 36 1.9 tr|Q6FYQ6|Q6FYQ6_BARQU Cell division protein ftsH OS=Bartonella ... 36 1.9 tr|Q3AXS0|Q3AXS0_SYNS9 FtsH peptidase homologue, chloroplast. Me... 36 1.9 tr|A1VJ87|A1VJ87_POLNA ATP-dependent metalloprotease FtsH OS=Pol... 36 1.9 tr|Q066W8|Q066W8_9SYNE Peptidase M41, FtsH OS=Synechococcus sp. ... 36 1.9 tr|B7XZF7|B7XZF7_RUMHA Putative uncharacterized protein OS=Blaut... 36 1.9 tr|A3VSE8|A3VSE8_9PROT Metalloprotease OS=Parvularcula bermudens... 36 1.9 tr|Q9A3H8|Q9A3H8_CAUCR Cell division protein FtsH OS=Caulobacter... 35 2.5 tr|Q92M98|Q92M98_RHIME Probable metalloprotease transmembrane pr... 35 2.5 tr|Q8FZ12|Q8FZ12_BRUSU Cell division protein FtsH OS=Brucella su... 35 2.5 tr|Q7CT50|Q7CT50_AGRT5 Metalloprotease OS=Agrobacterium tumefaci... 35 2.5 tr|Q2RM95|Q2RM95_MOOTA FtsH-2 peptidase. Metallo peptidase. MERO... 35 2.5 tr|Q2K4M2|Q2K4M2_RHIEC Cell division metalloproteinase protein O... 35 2.5 tr|B3PYX1|B3PYX1_RHIE6 Cell division metalloproteinase protein O... 35 2.5 tr|A9WWG8|A9WWG8_BRUSI ATP-dependent metalloprotease FtsH OS=Bru... 35 2.5
>tr|A9SCI8|A9SCI8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_210834 PE=4 SV=1 Length = 802
Score = 155 bits (392), Expect = 2e-36 Identities = 84/164 (51%), Positives = 106/164 (64%), Gaps = 3/164 (1%) Frame = +2
Query: 116 KLVQQQQAVES--WDKFWDTASRSEGFRFMLGILFFWLFYQTVVLGVKKKRKDYEDRLXX 289 +L QQQA +S W F+ +ASR+EGFRF++G+ FFWLFYQTVV+GVKK+++DYEDRL Sbjct: 206 QLRMQQQAQDSVDWSNFFYSASRNEGFRFLMGVFFFWLFYQTVVVGVKKRKQDYEDRLKI 265
Query: 290 XXXXXXXXXXXXXXXXXXXXXXXVSTIQGW-GXXXXXXXXXXXXXXXXXNPQLQMGLRFM 466 ++ W NPQLQMG++FM Sbjct: 266 EAAEEEERRK----------------MREWESEMEAAEEEKKRLEELEKNPQLQMGMKFM 309
Query: 467 RSGARVRRAKGKRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598 +SGARVRRAKG+RPP+YLDLDADV+F DVAGLG+IR+ELEEIVD Sbjct: 310 KSGARVRRAKGRRPPQYLDLDADVKFADVAGLGDIRKELEEIVD 353
>tr|A7P762|A7P762_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034338001 PE=4 SV=1 Length = 830
Score = 96.7 bits (239), Expect = 9e-19 Identities = 58/151 (38%), Positives = 77/151 (50%) Frame = +2
Query: 143 ESWDKFWDTASRSEGFRFMLGILFFWLFYQTVVLGVKKKRKDYEDRLXXXXXXXXXXXXX 322 E FW + LG +FF++FY+TVVL +K++KDYEDRL Sbjct: 243 ERMANFWANLAADSNVATALGFVFFYIFYRTVVLSYRKQKKDYEDRLKIEKAEAEEKKKM 302
Query: 323 XXXXXXXXXXXXVSTIQGWGXXXXXXXXXXXXXXXXXNPQLQMGLRFMRSGARVRRAKGK 502 + I+G NP ++M ++FM+SGARVRRA K Sbjct: 303 RELERQ------LEGIEG-------GEDESEIVGGEQNPYMKMAMQFMKSGARVRRAHNK 349
Query: 503 RPPKYLDLDADVRFEDVAGLGEIRRELEEIV 595 R P+YL+ DV+F DVAGLG+IR ELEEIV Sbjct: 350 RLPQYLERGVDVKFTDVAGLGKIRLELEEIV 380
>tr|A8MPR5|A8MPR5_ARATH Uncharacterized protein At3g16290.1 OS=Arabidopsis thaliana GN=At3g16290 PE=4 SV=1 Length = 876
Score = 95.1 bits (235), Expect = 3e-18 Identities = 57/161 (35%), Positives = 80/161 (49%) Frame = +2
Query: 113 EKLVQQQQAVESWDKFWDTASRSEGFRFMLGILFFWLFYQTVVLGVKKKRKDYEDRLXXX 292 E L + ++ W ++ LG++FF++FY+ VVL +K++KDYEDRL Sbjct: 279 ESLREARKNYRDMADMWARLAQDPNVATALGLVFFYIFYRVVVLNYRKQKKDYEDRLKIE 338
Query: 293 XXXXXXXXXXXXXXXXXXXXXXVSTIQGWGXXXXXXXXXXXXXXXXXNPQLQMGLRFMRS 472 + ++ NP LQM ++FM+S Sbjct: 339 KAEADERKK-------------MRELEREMEGIEEEDEEVEEGTGEKNPYLQMAMQFMKS 385
Query: 473 GARVRRAKGKRPPKYLDLDADVRFEDVAGLGEIRRELEEIV 595 GARVRRA KR P+YL+ DV+F DVAGLG+IR ELEEIV Sbjct: 386 GARVRRASNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIV 426
>tr|Q7U6X5|Q7U6X5_SYNPX Cell division protein FtsH4 OS=Synechococcus sp. (strain WH8102) GN=ftsH4 PE=4 SV=1 Length = 615
Score = 37.4 bits (85), Expect = 0.67 Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Frame = +2
Query: 443 LQMGLRFM--RSGARVRRAKG---KRPPKYLDLDADVRFEDVAGLGEIRRELEEIV 595 L +GL F+ RS RA G +P D VRFEDVAG+ + + ELEE+V Sbjct: 130 LVVGLSFLLRRSAQMANRALGFGRSQPRLKPQEDLQVRFEDVAGINDAKEELEEVV 185
>tr|Q13XX4|Q13XX4_BURXL FtsH-2 peptidase. Metallo peptidase. MEROPS family M41 OS=Burkholderia xenovorans (strain LB400) GN=Bxeno_A2527 PE=4 SV=1 Length = 659
Score = 37.4 bits (85), Expect = 0.67 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Frame = +2
Query: 467 RSGARVRRAKG---KRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598 R G +R G RP Y+ D DV F+D+AG+ E + EL++IV+ Sbjct: 141 RGGGGLRDFSGIGKSRPRVYVAQDTDVTFDDIAGIDEAKAELKQIVE 187
>tr|Q30RT0|Q30RT0_SULDN Peptidase M41 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=Suden_1023 PE=4 SV=1 Length = 547
Score = 37.0 bits (84), Expect = 0.87 Identities = 16/43 (37%), Positives = 29/43 (67%) Frame = +2
Query: 470 SGARVRRAKGKRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598 SG+ + +G RP + + +DV F+D+ G+ +++ ELEEI+D Sbjct: 126 SGSYGSKQEGSRPIE--SIKSDVTFDDIGGISDVKSELEEIID 166
>tr|B4RB47|B4RB47_PHEZH Cell division protein FtsH OS=Phenylobacterium zucineum (strain HLK1) GN=ftsH PE=4 SV=1 Length = 627
Score = 37.0 bits (84), Expect = 0.87 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +2
Query: 455 LRFMRSGARVRRAKGKRPPKYLDLDAD-VRFEDVAGLGEIRRELEEIVD 598 +R M+ GAR GK + L + + V FEDVAG+ E + EL+E+VD Sbjct: 122 MRQMQGGARGAMGFGKSKARLLTENKNRVTFEDVAGVDEAKEELQEVVD 170
>tr|B3S8F6|B3S8F6_TRIAD Predicted protein OS=Trichoplax adhaerens GN=TRIADDRAFT_60524 PE=4 SV=1 Length = 180
Score = 37.0 bits (84), Expect = 0.87 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%) Frame = -2
Query: 249 TPSTTVW*KSQKNKIPSMKRNPSLR----EAVSQNLSHDSTACCCCT 121 T ST+ W +S + + S+ RN R E + +N S+D+++CCCCT Sbjct: 133 TVSTSAW-ESMERHVKSLLRNLESRKSEYEPLLENYSNDNSSCCCCT 178
>tr|Q1MC76|Q1MC76_RHIL3 Putative cell division protein FtsH OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ftsH PE=3 SV=1 Length = 643
Score = 36.6 bits (83), Expect = 1.1 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +2
Query: 455 LRFMRSGARVRRAKGKRPPKYL-DLDADVRFEDVAGLGEIRRELEEIVD 598 +R M+ G+R GK K L + V FEDVAG+ E +++LEEIV+ Sbjct: 127 MRQMQGGSRGAMGFGKSKAKLLTEAHGRVTFEDVAGVDEAKQDLEEIVE 175
>tr|B5ZNL5|B5ZNL5_RHILW ATP-dependent metalloprotease FtsH OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=Rleg2_3196 PE=3 SV=1 Length = 643
Score = 36.6 bits (83), Expect = 1.1 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +2
Query: 455 LRFMRSGARVRRAKGKRPPKYL-DLDADVRFEDVAGLGEIRRELEEIVD 598 +R M+ G+R GK K L + V FEDVAG+ E +++LEEIV+ Sbjct: 127 MRQMQGGSRGAMGFGKSKAKLLTEAHGRVTFEDVAGVDEAKQDLEEIVE 175
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