DK951269
Clone id TST38A01NGRL0010_P08
Library
Length 611
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_P08. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CCGGAAATTGCGACAAGCACAAGCTGAGAAGGAAGCAAAAATGCTGGCCTTGCAAAAGAA
GCAACTGGAGGAAAGACAGAAGAAACTTGCACAAGCCAAGCAGGCTCAATCAGAAAAGCT
TGTACAACAGCAGCAAGCTGTTGAGTCATGGGATAAGTTCTGGGATACAGCCTCTCGCAG
TGAAGGGTTCCGTTTCATGCTGGGTATCTTGTTTTTCTGGCTTTTCTACCAGACTGTGGT
GCTTGGTGTGAAAAAAAAGCGGAAGGACTATGAAGATCGCTTGAAGATTGAGAAGGCTGA
AGAGGAAGAGCGGAAGAAGATGGAGGAGTGGGAGGATGAGGCTGATGCGGCAGAAGCCGT
CTCAACAATTCAAGGCTGGGGTTCAGACAAGAAAAGCGAGGAAGAGAAGCAGCAGCAGGA
GGAAGATGAGCAAAATCCTCAGCTCCAGATGGGTTTGCGTTTCATGCGGTCTGGTGCAAG
GGTGCGTCGAGCGAAGGGTAAGAGGCCCCCAAAATATCTCGACCTCGATGCGGATGTGAG
GTTTGAAGATGTGGCTGGGTTGGGTGAAATTCGACGAGAACTGGAGGAGATAGTTGATTT
TTTCAAATATA
■■Homology search results ■■ -
sp_hit_id O67077
Definition sp|O67077|FTSH_AQUAE Cell division protease ftsH homolog OS=Aquifex aeolicus
Align length 51
Score (bit) 35.0
E-value 0.29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951269|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_P08, 5'
(598 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O67077|FTSH_AQUAE Cell division protease ftsH homolog OS=Aqui... 35 0.29
sp|P54580|Y2433_MYCLE Uncharacterized protein ML2433 OS=Mycobact... 32 2.4
sp|P32795|YME1_YEAST Protein YME1 OS=Saccharomyces cerevisiae GN... 32 3.2
sp|O59824|YME1_SCHPO Protein YME1 homolog OS=Schizosaccharomyces... 32 3.2
sp|Q9SD67|FTSH7_ARATH Cell division protease ftsH homolog 7, chl... 31 4.2
sp|P71377|FTSH1_HAEIN Cell division protease ftsH homolog 1 OS=H... 31 4.2
sp|Q1RGP0|FTSH_RICBR Cell division protease ftsH homolog OS=Rick... 30 7.1
sp|Q55700|FTSH1_SYNY3 Cell division protease ftsH homolog 1 OS=S... 30 7.1
sp|Q86WK9|MPRA_HUMAN Membrane progestin receptor alpha OS=Homo s... 30 9.2
sp|Q9SEX2|KTNA1_ARATH Katanin p60 ATPase-containing subunit OS=A... 30 9.3
sp|Q68XR9|FTSH_RICTY Cell division protease ftsH homolog OS=Rick... 30 9.3
sp|Q9ZEA2|FTSH_RICPR Cell division protease ftsH homolog OS=Rick... 30 9.3
sp|Q4UN68|FTSH_RICFE Cell division protease ftsH homolog OS=Rick... 30 9.3
sp|Q92JJ9|FTSH_RICCN Cell division protease ftsH homolog OS=Rick... 30 9.3
sp|Q9FIM2|FTSH9_ARATH Cell division protease ftsH homolog 9, chl... 30 9.3

>sp|O67077|FTSH_AQUAE Cell division protease ftsH homolog OS=Aquifex
aeolicus GN=ftsH PE=1 SV=1
Length = 634

Score = 35.0 bits (79), Expect = 0.29
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2

Query: 455 LRFMRSGARVRRAKG---KRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598
LR M G V RA R Y++ V F+DVAG+ E++ E++EI++
Sbjct: 122 LRQMSGGGNVNRAFNFGKSRAKVYIEEKPKVTFKDVAGIEEVKEEVKEIIE 172


>sp|P54580|Y2433_MYCLE Uncharacterized protein ML2433
OS=Mycobacterium leprae GN=ML2433 PE=4 SV=2
Length = 355

Score = 32.0 bits (71), Expect = 2.4
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -3

Query: 584 PVLVEFHPTQPHLQTSHPHRGRDILGASYPSLDAPLHQTA*N--ANPSGAEDFAHLPPAA 411
P++ + H + HL +H HR + P+ +PL A P +D H+PP
Sbjct: 56 PIIHDDHADEQHLAATHAHRANIGVRVVEPAAQSPLEPVCEGIVAEPP-VDDHGHVPPGC 114

Query: 410 ASLP 399
S P
Sbjct: 115 WSAP 118


>sp|P32795|YME1_YEAST Protein YME1 OS=Saccharomyces cerevisiae
GN=YME1 PE=1 SV=1
Length = 747

Score = 31.6 bits (70), Expect = 3.2
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2

Query: 533 DVRFEDVAGLGEIRRELEEIVD 598
+V+F+DV G E R ELEEIVD
Sbjct: 277 NVKFDDVCGCDEARAELEEIVD 298


>sp|O59824|YME1_SCHPO Protein YME1 homolog OS=Schizosaccharomyces
pombe GN=SPCC965.04c PE=2 SV=1
Length = 709

Score = 31.6 bits (70), Expect = 3.2
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2

Query: 533 DVRFEDVAGLGEIRRELEEIVD 598
+VRF DV G+ E + ELEEIVD
Sbjct: 263 NVRFSDVQGVDEAKEELEEIVD 284


>sp|Q9SD67|FTSH7_ARATH Cell division protease ftsH homolog 7,
chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1
Length = 802

Score = 31.2 bits (69), Expect = 4.2
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2

Query: 479 RVRRAKGKRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598
R R+A G K + F DVAG+ E + ELEEIV+
Sbjct: 303 RTRKAGGPDGGKVSGGGETITFADVAGVDEAKEELEEIVE 342


>sp|P71377|FTSH1_HAEIN Cell division protease ftsH homolog 1
OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1
Length = 635

Score = 31.2 bits (69), Expect = 4.2
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2

Query: 455 LRFMRSGARVRRAKGKRPPKYLDLDA-DVRFEDVAGLGEIRRELEEIVD 598
+R M+ G + GK K L+ D V F DVAG E + E+ EIVD
Sbjct: 120 MRQMQGGGGKAMSFGKSRAKMLNQDQIKVTFADVAGCDEAKEEVGEIVD 168


>sp|Q1RGP0|FTSH_RICBR Cell division protease ftsH homolog
OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1
Length = 638

Score = 30.4 bits (67), Expect = 7.1
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2

Query: 455 LRFMRSGARVRRAKGKRPPKYL-DLDADVRFEDVAGLGEIRRELEEIVD 598
+R M G + GK K L D + F+DVAG+ E + EL EIVD
Sbjct: 125 MRQMHGGGKAM-GFGKSKAKLLSDKGPKITFKDVAGIDEAKDELTEIVD 172


>sp|Q55700|FTSH1_SYNY3 Cell division protease ftsH homolog 1
OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3
SV=1
Length = 627

Score = 30.4 bits (67), Expect = 7.1
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2

Query: 497 GKRPPKY-LDLDADVRFEDVAGLGEIRRELEEIV 595
GK ++ +D V F+DVAG+ E + EL+E+V
Sbjct: 155 GKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVV 188


>sp|Q86WK9|MPRA_HUMAN Membrane progestin receptor alpha OS=Homo
sapiens GN=PAQR7 PE=2 SV=1
Length = 346

Score = 30.0 bits (66), Expect = 9.2
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3

Query: 116 FLIEPAWLVQVSSVFPPVASF 54
+ IEPAW QV +VF P+A+F
Sbjct: 160 YAIEPAWHAQVQAVFLPMAAF 180


>sp|Q9SEX2|KTNA1_ARATH Katanin p60 ATPase-containing subunit
OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1
Length = 523

Score = 30.0 bits (66), Expect = 9.3
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2

Query: 518 LDLDADVRFEDVAGLGEIRRELEEIV 595
LD VR++DVAGL E +R LEE V
Sbjct: 230 LDSTPGVRWDDVAGLSEAKRLLEEAV 255


tr_hit_id A9SCI8
Definition tr|A9SCI8|A9SCI8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 164
Score (bit) 155.0
E-value 2.0e-36
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951269|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_P08, 5'
(598 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SCI8|A9SCI8_PHYPA Predicted protein OS=Physcomitrella paten... 155 2e-36
tr|A7P762|A7P762_VITVI Chromosome chr9 scaffold_7, whole genome ... 97 9e-19
tr|A8MPR5|A8MPR5_ARATH Uncharacterized protein At3g16290.1 OS=Ar... 95 3e-18
tr|Q7U6X5|Q7U6X5_SYNPX Cell division protein FtsH4 OS=Synechococ... 37 0.67
tr|Q13XX4|Q13XX4_BURXL FtsH-2 peptidase. Metallo peptidase. MERO... 37 0.67
tr|Q30RT0|Q30RT0_SULDN Peptidase M41 OS=Sulfurimonas denitrifica... 37 0.87
tr|B4RB47|B4RB47_PHEZH Cell division protein FtsH OS=Phenylobact... 37 0.87
tr|B3S8F6|B3S8F6_TRIAD Predicted protein OS=Trichoplax adhaerens... 37 0.87
tr|Q1MC76|Q1MC76_RHIL3 Putative cell division protein FtsH OS=Rh... 37 1.1
tr|B5ZNL5|B5ZNL5_RHILW ATP-dependent metalloprotease FtsH OS=Rhi... 37 1.1
tr|B0ISW2|B0ISW2_RHILT ATP-dependent metalloprotease FtsH OS=Rhi... 37 1.1
tr|Q3AK06|Q3AK06_SYNSC ATP-dependent metalloprotease FtsH OS=Syn... 36 1.5
tr|Q9ZGE1|Q9ZGE1_HELMO ATP-dependent zinc metallopeptidase FtsH ... 36 1.5
tr|A8V262|A8V262_9AQUI Cell division protein FtsH OS=Hydrogenivi... 36 1.5
tr|A7TI20|A7TI20_VANPO Putative uncharacterized protein OS=Vande... 36 1.5
tr|Q6G5P6|Q6G5P6_BARHE Cell division protein ftsH OS=Bartonella ... 36 1.9
tr|Q6FYQ6|Q6FYQ6_BARQU Cell division protein ftsH OS=Bartonella ... 36 1.9
tr|Q3AXS0|Q3AXS0_SYNS9 FtsH peptidase homologue, chloroplast. Me... 36 1.9
tr|A1VJ87|A1VJ87_POLNA ATP-dependent metalloprotease FtsH OS=Pol... 36 1.9
tr|Q066W8|Q066W8_9SYNE Peptidase M41, FtsH OS=Synechococcus sp. ... 36 1.9
tr|B7XZF7|B7XZF7_RUMHA Putative uncharacterized protein OS=Blaut... 36 1.9
tr|A3VSE8|A3VSE8_9PROT Metalloprotease OS=Parvularcula bermudens... 36 1.9
tr|Q9A3H8|Q9A3H8_CAUCR Cell division protein FtsH OS=Caulobacter... 35 2.5
tr|Q92M98|Q92M98_RHIME Probable metalloprotease transmembrane pr... 35 2.5
tr|Q8FZ12|Q8FZ12_BRUSU Cell division protein FtsH OS=Brucella su... 35 2.5
tr|Q7CT50|Q7CT50_AGRT5 Metalloprotease OS=Agrobacterium tumefaci... 35 2.5
tr|Q2RM95|Q2RM95_MOOTA FtsH-2 peptidase. Metallo peptidase. MERO... 35 2.5
tr|Q2K4M2|Q2K4M2_RHIEC Cell division metalloproteinase protein O... 35 2.5
tr|B3PYX1|B3PYX1_RHIE6 Cell division metalloproteinase protein O... 35 2.5
tr|A9WWG8|A9WWG8_BRUSI ATP-dependent metalloprotease FtsH OS=Bru... 35 2.5

>tr|A9SCI8|A9SCI8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_210834 PE=4 SV=1
Length = 802

Score = 155 bits (392), Expect = 2e-36
Identities = 84/164 (51%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
Frame = +2

Query: 116 KLVQQQQAVES--WDKFWDTASRSEGFRFMLGILFFWLFYQTVVLGVKKKRKDYEDRLXX 289
+L QQQA +S W F+ +ASR+EGFRF++G+ FFWLFYQTVV+GVKK+++DYEDRL
Sbjct: 206 QLRMQQQAQDSVDWSNFFYSASRNEGFRFLMGVFFFWLFYQTVVVGVKKRKQDYEDRLKI 265

Query: 290 XXXXXXXXXXXXXXXXXXXXXXXVSTIQGW-GXXXXXXXXXXXXXXXXXNPQLQMGLRFM 466
++ W NPQLQMG++FM
Sbjct: 266 EAAEEEERRK----------------MREWESEMEAAEEEKKRLEELEKNPQLQMGMKFM 309

Query: 467 RSGARVRRAKGKRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598
+SGARVRRAKG+RPP+YLDLDADV+F DVAGLG+IR+ELEEIVD
Sbjct: 310 KSGARVRRAKGRRPPQYLDLDADVKFADVAGLGDIRKELEEIVD 353


>tr|A7P762|A7P762_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034338001
PE=4 SV=1
Length = 830

Score = 96.7 bits (239), Expect = 9e-19
Identities = 58/151 (38%), Positives = 77/151 (50%)
Frame = +2

Query: 143 ESWDKFWDTASRSEGFRFMLGILFFWLFYQTVVLGVKKKRKDYEDRLXXXXXXXXXXXXX 322
E FW + LG +FF++FY+TVVL +K++KDYEDRL
Sbjct: 243 ERMANFWANLAADSNVATALGFVFFYIFYRTVVLSYRKQKKDYEDRLKIEKAEAEEKKKM 302

Query: 323 XXXXXXXXXXXXVSTIQGWGXXXXXXXXXXXXXXXXXNPQLQMGLRFMRSGARVRRAKGK 502
+ I+G NP ++M ++FM+SGARVRRA K
Sbjct: 303 RELERQ------LEGIEG-------GEDESEIVGGEQNPYMKMAMQFMKSGARVRRAHNK 349

Query: 503 RPPKYLDLDADVRFEDVAGLGEIRRELEEIV 595
R P+YL+ DV+F DVAGLG+IR ELEEIV
Sbjct: 350 RLPQYLERGVDVKFTDVAGLGKIRLELEEIV 380


>tr|A8MPR5|A8MPR5_ARATH Uncharacterized protein At3g16290.1
OS=Arabidopsis thaliana GN=At3g16290 PE=4 SV=1
Length = 876

Score = 95.1 bits (235), Expect = 3e-18
Identities = 57/161 (35%), Positives = 80/161 (49%)
Frame = +2

Query: 113 EKLVQQQQAVESWDKFWDTASRSEGFRFMLGILFFWLFYQTVVLGVKKKRKDYEDRLXXX 292
E L + ++ W ++ LG++FF++FY+ VVL +K++KDYEDRL
Sbjct: 279 ESLREARKNYRDMADMWARLAQDPNVATALGLVFFYIFYRVVVLNYRKQKKDYEDRLKIE 338

Query: 293 XXXXXXXXXXXXXXXXXXXXXXVSTIQGWGXXXXXXXXXXXXXXXXXNPQLQMGLRFMRS 472
+ ++ NP LQM ++FM+S
Sbjct: 339 KAEADERKK-------------MRELEREMEGIEEEDEEVEEGTGEKNPYLQMAMQFMKS 385

Query: 473 GARVRRAKGKRPPKYLDLDADVRFEDVAGLGEIRRELEEIV 595
GARVRRA KR P+YL+ DV+F DVAGLG+IR ELEEIV
Sbjct: 386 GARVRRASNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIV 426


>tr|Q7U6X5|Q7U6X5_SYNPX Cell division protein FtsH4 OS=Synechococcus
sp. (strain WH8102) GN=ftsH4 PE=4 SV=1
Length = 615

Score = 37.4 bits (85), Expect = 0.67
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2

Query: 443 LQMGLRFM--RSGARVRRAKG---KRPPKYLDLDADVRFEDVAGLGEIRRELEEIV 595
L +GL F+ RS RA G +P D VRFEDVAG+ + + ELEE+V
Sbjct: 130 LVVGLSFLLRRSAQMANRALGFGRSQPRLKPQEDLQVRFEDVAGINDAKEELEEVV 185


>tr|Q13XX4|Q13XX4_BURXL FtsH-2 peptidase. Metallo peptidase. MEROPS
family M41 OS=Burkholderia xenovorans (strain LB400)
GN=Bxeno_A2527 PE=4 SV=1
Length = 659

Score = 37.4 bits (85), Expect = 0.67
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2

Query: 467 RSGARVRRAKG---KRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598
R G +R G RP Y+ D DV F+D+AG+ E + EL++IV+
Sbjct: 141 RGGGGLRDFSGIGKSRPRVYVAQDTDVTFDDIAGIDEAKAELKQIVE 187


>tr|Q30RT0|Q30RT0_SULDN Peptidase M41 OS=Sulfurimonas denitrificans
(strain ATCC 33889 / DSM 1251) GN=Suden_1023 PE=4 SV=1
Length = 547

Score = 37.0 bits (84), Expect = 0.87
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +2

Query: 470 SGARVRRAKGKRPPKYLDLDADVRFEDVAGLGEIRRELEEIVD 598
SG+ + +G RP + + +DV F+D+ G+ +++ ELEEI+D
Sbjct: 126 SGSYGSKQEGSRPIE--SIKSDVTFDDIGGISDVKSELEEIID 166


>tr|B4RB47|B4RB47_PHEZH Cell division protein FtsH
OS=Phenylobacterium zucineum (strain HLK1) GN=ftsH PE=4
SV=1
Length = 627

Score = 37.0 bits (84), Expect = 0.87
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2

Query: 455 LRFMRSGARVRRAKGKRPPKYLDLDAD-VRFEDVAGLGEIRRELEEIVD 598
+R M+ GAR GK + L + + V FEDVAG+ E + EL+E+VD
Sbjct: 122 MRQMQGGARGAMGFGKSKARLLTENKNRVTFEDVAGVDEAKEELQEVVD 170


>tr|B3S8F6|B3S8F6_TRIAD Predicted protein OS=Trichoplax adhaerens
GN=TRIADDRAFT_60524 PE=4 SV=1
Length = 180

Score = 37.0 bits (84), Expect = 0.87
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = -2

Query: 249 TPSTTVW*KSQKNKIPSMKRNPSLR----EAVSQNLSHDSTACCCCT 121
T ST+ W +S + + S+ RN R E + +N S+D+++CCCCT
Sbjct: 133 TVSTSAW-ESMERHVKSLLRNLESRKSEYEPLLENYSNDNSSCCCCT 178


>tr|Q1MC76|Q1MC76_RHIL3 Putative cell division protein FtsH
OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=ftsH PE=3 SV=1
Length = 643

Score = 36.6 bits (83), Expect = 1.1
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2

Query: 455 LRFMRSGARVRRAKGKRPPKYL-DLDADVRFEDVAGLGEIRRELEEIVD 598
+R M+ G+R GK K L + V FEDVAG+ E +++LEEIV+
Sbjct: 127 MRQMQGGSRGAMGFGKSKAKLLTEAHGRVTFEDVAGVDEAKQDLEEIVE 175


>tr|B5ZNL5|B5ZNL5_RHILW ATP-dependent metalloprotease FtsH
OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304)
GN=Rleg2_3196 PE=3 SV=1
Length = 643

Score = 36.6 bits (83), Expect = 1.1
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2

Query: 455 LRFMRSGARVRRAKGKRPPKYL-DLDADVRFEDVAGLGEIRRELEEIVD 598
+R M+ G+R GK K L + V FEDVAG+ E +++LEEIV+
Sbjct: 127 MRQMQGGSRGAMGFGKSKAKLLTEAHGRVTFEDVAGVDEAKQDLEEIVE 175