DK951273 |
Clone id |
TST38A01NGRL0010_P12 |
Library |
TST38 |
Length |
552 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_P12. 5' end sequence. |
Accession |
DK951273 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL151Contig1 |
Sequence |
AGTTATTGTTGATGCAGTTATCAACAGTGGTCCTCGGGAGGATGCCACTCGTATTGGATC GGCTGGTGTTGTTAGAAGACAGGCTGTCGATATCTCTCCTCTTAGGAGAGTAAACCAGGC TATCTATCTCCTCACTACTGGTGCTCGAGAGAGTGCTTTCAGAAATATCAAGACTATAGC GGAGTGCCTTGCTGATGAGCTGATCAATGCAGCCAAAGGTTCTTCCAATAGTTATGCTAT CAAGAAGAAGGATGAGATTGAACGCGTGGCGAAGGCCAACCGTTAACTGTATTCTTATTG CTGTTATTTGATGCCAGAGTTTGGCATGAAATTTTGACCTTCTTGAAGACTACTGCTGAG TGTTTTATACTCGCACAGCATTTTCTTGAGCAGTATTAGTGGCTTGTTTCTAGCAGCTTG CTACTCTTTGTCGGATGCGTTTTGACTACNAACATACTTAGTCTCGAGGTGGTCTTTATT TAGTATATTGGTAGCAATCAAGCAATGAAAATTGTGTGATTTGTGTTTGAAAAAAAAAAA AAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O24111 |
Definition |
sp|O24111|RS5_NICPL 40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia |
Align length |
94 |
Score (bit) |
177.0 |
E-value |
2.0e-44 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6RH11 |
Definition |
tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annuum |
Align length |
94 |
Score (bit) |
179.0 |
E-value |
6.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951273|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_P12, 5' (529 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annu... 179 6e-44 tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome... 179 6e-44 tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 179 8e-44 tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome... 179 8e-44 tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 179 1e-43 tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 179 1e-43 tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea m... 179 1e-43 tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella paten... 179 1e-43 tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert seque... 177 2e-43 tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expre... 177 2e-43 tr|B3TLU9|B3TLU9_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 177 2e-43 tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza... 177 2e-43 tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza... 177 2e-43 tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Popul... 177 3e-43 tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea... 177 3e-43 tr|Q6Y0E6|Q6Y0E6_VITVI Putative 40S ribosomal protein S5 (Fragme... 177 4e-43 tr|B6UGL6|B6UGL6_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 177 4e-43 tr|A8J2I5|A8J2I5_CHLRE Ribosomal protein S5 OS=Chlamydomonas rei... 175 1e-42 tr|Q016A0|Q016A0_OSTTA RS5_CICAR 40S ribosomal protein S5 (ISS) ... 175 1e-42 tr|B7FGS4|B7FGS4_MEDTR Putative uncharacterized protein OS=Medic... 174 2e-42 tr|Q2UVI0|Q2UVI0_9CHLO 40S ribosomal protein S5 OS=Chlamydomonas... 172 1e-41 tr|B7FMH6|B7FMH6_MEDTR Putative uncharacterized protein (Fragmen... 170 4e-41 tr|A4RZJ5|A4RZJ5_OSTLU Ribosomal protein S5, component of cytoso... 170 5e-41 tr|B6E206|B6E206_CHLPR Ribosomal protein S5 OS=Chlorella prototh... 169 8e-41 tr|Q6QD56|Q6QD56_ORNMO 40S ribosomal protein S5 OS=Ornithodoros ... 166 5e-40 tr|B2YI07|B2YI07_9BILA Putative 40S ribosomal protein RPS5 OS=Ph... 166 7e-40 tr|Q6B8C3|Q6B8C3_9ACAR 40S ribosomal protein S5 OS=Ixodes pacifi... 166 9e-40 tr|Q4PMB9|Q4PMB9_IXOSC 40S ribosomal protein S5, putative OS=Ixo... 166 9e-40 tr|A6N9N9|A6N9N9_ORNPR Ribosomal protein S7 OS=Ornithodoros park... 166 9e-40 tr|Q7XYA3|Q7XYA3_GRIJA 40S ribosome protein S5 OS=Griffithsia ja... 165 1e-39
>tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annuum GN=RpS5 PE=2 SV=1 Length = 212
Score = 179 bits (455), Expect = 6e-44 Identities = 94/94 (100%), Positives = 94/94 (100%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 119 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 178
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 179 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 212
>tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026702001 PE=3 SV=1 Length = 204
Score = 179 bits (455), Expect = 6e-44 Identities = 94/94 (100%), Positives = 94/94 (100%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 111 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 170
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 171 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 204
>tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 195
Score = 179 bits (454), Expect = 8e-44 Identities = 93/94 (98%), Positives = 94/94 (100%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 VIVDA+INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 102 VIVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 161
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 162 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 195
>tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025458001 PE=3 SV=1 Length = 208
Score = 179 bits (454), Expect = 8e-44 Identities = 93/94 (98%), Positives = 94/94 (100%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRR+NQAIYLLTTGARESAFRNIKTIA Sbjct: 115 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRINQAIYLLTTGARESAFRNIKTIA 174
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 175 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 208
>tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2 SV=1 Length = 199
Score = 179 bits (453), Expect = 1e-43 Identities = 92/94 (97%), Positives = 94/94 (100%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 V+VDA+INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 106 VVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 165
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 166 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199
>tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2 SV=1 Length = 199
Score = 179 bits (453), Expect = 1e-43 Identities = 92/94 (97%), Positives = 94/94 (100%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 V+VDA+INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 106 VVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 165
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 166 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199
>tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 199
Score = 179 bits (453), Expect = 1e-43 Identities = 92/94 (97%), Positives = 94/94 (100%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 V+VDA+INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 106 VVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 165
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 166 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199
>tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106946 PE=3 SV=1 Length = 196
Score = 179 bits (453), Expect = 1e-43 Identities = 92/94 (97%), Positives = 94/94 (100%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 VIVDA+INSGPREDATRIGSAGV+RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 103 VIVDAIINSGPREDATRIGSAGVIRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 162
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 163 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 196
>tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert sequence OS=Oryza sativa subsp. japonica GN=P0672D08.6 PE=2 SV=1 Length = 200
Score = 177 bits (450), Expect = 2e-43 Identities = 92/94 (97%), Positives = 93/94 (98%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 VIVDA+INSGPREDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 107 VIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 166
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 167 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 200
>tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0482000 PE=2 SV=1 Length = 199
Score = 177 bits (450), Expect = 2e-43 Identities = 92/94 (97%), Positives = 93/94 (98%) Frame = +2
Query: 2 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 181 VIVDA+INSGPREDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA Sbjct: 106 VIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIA 165
Query: 182 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 283 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR Sbjct: 166 ECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199
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