DK951289
Clone id TST38A01NGRL0011_A05
Library
Length 659
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_A05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GAATAATGTCTTTGGGTAAGCCATGTAGCCTCCAGCGCACACGTAGTTGTTCTTCTTCGA
TGGCATGGCAACGGGCTCTCAAACGTTTCAGATGGAATGTTATCGCCCCTCTTGCAGCTT
TTGCAGCTATCCAACACAGCTCCCCGCTTCTCCTCCAGCCCGCATCAACTCCTCCTGAGA
AGGTGAAGGAGCCTTTTACGGGCATTGAATTTGACTGGAAAAGGAACATCAGGCAAGCTG
AAGCAGAGGGAGAATATCAACTTCTTGGAACAGCTGTTCGTTGCATGCTTGGCCAGTGTA
AATTTGCCAAGGCTCGAGCTTATGCAGTTGGCTTGTACGTTGAGAATGTGGATGAGGGAC
TGTGGAAGGTTAGTGGTGGAGATGCTCGATTTCAAGTGTTGCTGTCAATGCAAACCCCTC
GCAATCTTTTGCTTGTCATGGATCAGGATGTGGCAGGTCATCATATCGCGAAGGGTTTTG
ATCGTTCTTTATTGCCACGGGTACGCAAGGCTCAAGGCGGTAAAGCGGGGCGTGGGAAAG
ATGCATTAAAAGAGTTCACTCAATGTTTCAATCAAGAGAAGCTGCTGAAGAAAGGAGCTG
AAGTTTGTCTGGTATGGAGGCCTGATGATACGCTTGTTGTCATAATTGACTCGAGAGTT
■■Homology search results ■■ -
sp_hit_id O67065
Definition sp|O67065|FER1_AQUAE Ferredoxin-1 OS=Aquifex aeolicus
Align length 71
Score (bit) 30.4
E-value 8.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951289|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_A05, 5'
(659 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O67065|FER1_AQUAE Ferredoxin-1 OS=Aquifex aeolicus GN=fdx1 PE... 30 8.6

>sp|O67065|FER1_AQUAE Ferredoxin-1 OS=Aquifex aeolicus GN=fdx1 PE=1
SV=1
Length = 96

Score = 30.4 bits (67), Expect = 8.6
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +3

Query: 183 VKEPFTGIEFDWKRNIRQAEAEGEYQLLGTAVRCMLGQCKFAKARAY----AVGLYVENV 350
+K G EFD + +R E E + G C GQC AR + E
Sbjct: 1 MKVIINGKEFDIPKGVRFGELSHEIEKAGIEFGCTDGQCGVCVARVIKGMECLNEPSEEE 60

Query: 351 DEGLWKVSGGD 383
+E LW+V D
Sbjct: 61 EETLWRVGAVD 71


tr_hit_id A9RME8
Definition tr|A9RME8|A9RME8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 184
Score (bit) 145.0
E-value 2.0e-33
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951289|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_A05, 5'
(659 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RME8|A9RME8_PHYPA Predicted protein OS=Physcomitrella paten... 145 2e-33
tr|A7P2A5|A7P2A5_VITVI Chromosome chr19 scaffold_4, whole genome... 41 0.075
tr|A9SD96|A9SD96_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.22
tr|Q8LFP0|Q8LFP0_ARATH Chalcone isomerase, putative OS=Arabidops... 39 0.28
tr|Q2JKB8|Q2JKB8_SYNJB TPR domain protein OS=Synechococcus sp. (... 38 0.48
tr|Q9LPG8|Q9LPG8_ARATH T3F20.16 protein OS=Arabidopsis thaliana ... 37 1.4
tr|Q9C8L2|Q9C8L2_ARATH Chalcone isomerase, putative; 94270-95700... 37 1.4
tr|Q53B73|Q53B73_SOYBN Putative chalcone isomerase 3 OS=Glycine ... 36 2.4
tr|Q0U0I2|Q0U0I2_PHANO Putative uncharacterized protein OS=Phaeo... 36 2.4
tr|A6G8L0|A6G8L0_9DELT Putative uncharacterized protein OS=Plesi... 35 4.1
tr|Q5B5G4|Q5B5G4_EMENI Putative uncharacterized protein OS=Emeri... 35 4.1
tr|B2EUI4|B2EUI4_9BACT Glycoside hydrolase family 9 OS=bacterium... 35 5.3
tr|B8LEL6|B8LEL6_THAPS Predicted protein OS=Thalassiosira pseudo... 35 5.3
tr|A4EBJ3|A4EBJ3_9ACTN Putative uncharacterized protein OS=Colli... 34 7.0
tr|A5C8D5|A5C8D5_VITVI Putative uncharacterized protein OS=Vitis... 34 9.1

>tr|A9RME8|A9RME8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_159965 PE=4 SV=1
Length = 224

Score = 145 bits (367), Expect = 2e-33
Identities = 83/184 (45%), Positives = 110/184 (59%), Gaps = 1/184 (0%)
Frame = +3

Query: 111 LAAFAAIQHSSPLLLQPASTPPEKVKEPFTGIEFDWKRNIRQAEAEGEYQLLGTAVRCML 290
LA + +S +L ++ + VKEPFTGIEF+ ++ I +Y L TAVRCML
Sbjct: 12 LALLPLLSNSHDAVLSHSNAYEKNVKEPFTGIEFEQQKQIDN----NDYHLQATAVRCML 67

Query: 291 GQCKFAKARAYAVGLYVENVDEGLWKVSGGDARFQVLLSMQTPRNLLLVMDQDVAGHHIA 470
GQCK A ARAYA+GLY E+ +L+ R L+LVMD+DVAGHHIA
Sbjct: 68 GQCKMAMARAYAIGLYTEDKQP---------VNETAVLTGAMNRILVLVMDKDVAGHHIA 118

Query: 471 KGFDRSLLPXXXXXXXXXXXXXXXX-LKEFTQCFNQEKLLKKGAEVCLVWRPDDTLVVII 647
KGFD+SLLP L++FT+CFN+EK LKKG+EV L+W PD+ LVV
Sbjct: 119 KGFDKSLLPRIRKAQAGSKRGSGKDALRDFTKCFNREKTLKKGSEVALLWTPDNKLVVYF 178

Query: 648 DSRV 659
D+++
Sbjct: 179 DNQM 182


>tr|A7P2A5|A7P2A5_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027944001
PE=4 SV=1
Length = 283

Score = 40.8 bits (94), Expect = 0.075
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Frame = +3

Query: 177 EKVKEPFTGIEFDWKRNIRQAEAEGEYQLLGTAVRCMLGQCKFAKARAYAVGLYV-ENVD 353
E ++EP T ++F + ++ E LLGT R + + YA GLY+ +++
Sbjct: 78 EYIEEPSTNVKF--QTSLTLPECSSPLSLLGTGYREKV--FAIIGVKVYAAGLYLNQSIS 133

Query: 354 EGL--WK------VSGGDARFQVLLSMQTPRNLLLVMDQDVAGHHIAKGFDRSLLPXXXX 509
L WK + G + F + + ++L +V+ +DV G D ++ P
Sbjct: 134 NKLNAWKGRSATEIQGDSSLFDSIFQIPQEKSLQIVLVRDVDGKTFWDALDEAISPRIKA 193

Query: 510 XXXXXXXXXXXXLKEFTQCFNQEKLLKKGAEVCLVWRPDDTLVVIIDS 653
L F F Q + L+KG + L W ++V I S
Sbjct: 194 PSPVDVSA----LSTFRSIF-QGRSLRKGTFIFLTWMEPSKMLVCISS 236


>tr|A9SD96|A9SD96_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_127780 PE=4 SV=1
Length = 217

Score = 39.3 bits (90), Expect = 0.22
Identities = 46/164 (28%), Positives = 65/164 (39%), Gaps = 9/164 (5%)
Frame = +3

Query: 183 VKEPFTGIEFDWKRNIRQAEAEGEYQLLGTAVRCMLGQCKFAKARAYAVGLYVE-NVDEG 359
V EP T I+F + ++ LG VR Q F K + YAVG+Y + +V
Sbjct: 12 VTEPATSIKFALLLTV--PDSSNTLTFLGAGVREK--QIAFLKVKVYAVGVYAQPDVAAS 67

Query: 360 L--WKVSGG------DARFQVLLSMQTPRNLLLVMDQDVAGHHIAKGFDRSLLPXXXXXX 515
L WK +A FQ L + L + + +DV G D +L+P
Sbjct: 68 LASWKGKSAADLVKDEALFQELAQAPVEKALQIKLARDVDGATFWGALDEALVP--RLTA 125

Query: 516 XXXXXXXXXXLKEFTQCFNQEKLLKKGAEVCLVWRPDDTLVVII 647
L EF F + + L+KG + L W TL V I
Sbjct: 126 SGAGADGDAALAEFGNVF-KNRSLQKGYVITLTWVQPSTLRVTI 168


>tr|Q8LFP0|Q8LFP0_ARATH Chalcone isomerase, putative OS=Arabidopsis
thaliana PE=2 SV=1
Length = 287

Score = 38.9 bits (89), Expect = 0.28
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 11/167 (6%)
Frame = +3

Query: 186 KEPFTGIEFDWKRNIRQAEAEGEYQLLGTAVRCMLGQCKFA--KARAYAVGLYV-ENVDE 356
+E T ++F KR++ LLGT R + KFA + YA G YV E++
Sbjct: 85 EETATSVKF--KRSVTLPGCSSPLSLLGTGFR----EKKFAIIGVKVYAAGYYVNESILS 138

Query: 357 GL--WKVSGGD------ARFQVLLSMQTPRNLLLVMDQDVAGHHIAKGFDRSLLPXXXXX 512
GL WK D + F + Q ++L +V+ +DV G D ++ P
Sbjct: 139 GLSAWKGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDVDGKTFWDALDEAISPRIKSP 198

Query: 513 XXXXXXXXXXXLKEFTQCFNQEKLLKKGAEVCLVWRPDDTLVVIIDS 653
L F F Q + L KG+ + L W ++V + S
Sbjct: 199 SSEDTTA----LSTFRGIF-QNRPLNKGSVILLTWINTSNMLVSVSS 240


>tr|Q2JKB8|Q2JKB8_SYNJB TPR domain protein OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=CYB_1920 PE=4 SV=1
Length = 182

Score = 38.1 bits (87), Expect = 0.48
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3

Query: 42 RSCSSSMAWQRALKRFRWNVIAPLAAFAAIQHSSPLLLQPA-STPPEKVKEPFTGIEFDW 218
R C + R+ + RW IA + AA +P + PA PPEK P T EF+W
Sbjct: 8 RKCIRTSLAVRSTIKCRWGRIALIGFLAAFLAPAPAISLPAFPPPPEKTSAPNTASEFNW 67

Query: 219 KRNIR 233
+ +++
Sbjct: 68 QGSLK 72


>tr|Q9LPG8|Q9LPG8_ARATH T3F20.16 protein OS=Arabidopsis thaliana
GN=T3F20.16 PE=4 SV=1
Length = 271

Score = 36.6 bits (83), Expect = 1.4
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 11/167 (6%)
Frame = +3

Query: 186 KEPFTGIEFDWKRNIRQAEAEGEYQLLGTAVRCMLGQCKFA--KARAYAVGLYV-ENVDE 356
+E T ++F KR++ LLGT R + KFA + YA G YV E++
Sbjct: 85 EETATSVKF--KRSVTLPGCSSPLSLLGTGFR----EKKFAIIGVKVYAAGYYVNESILS 138

Query: 357 GLWKVSGGDAR--------FQVLLSMQTPRNLLLVMDQDVAGHHIAKGFDRSLLPXXXXX 512
GL +G A F + Q ++L +V+ +DV G D ++ P
Sbjct: 139 GLSAWTGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDVDGKTFWDALDEAISPRIKSP 198

Query: 513 XXXXXXXXXXXLKEFTQCFNQEKLLKKGAEVCLVWRPDDTLVVIIDS 653
L F F Q + L KG+ + L W ++V + S
Sbjct: 199 SSEDTTA----LSTFRGIF-QNRPLNKGSVILLTWINTSNMLVSVSS 240


>tr|Q9C8L2|Q9C8L2_ARATH Chalcone isomerase, putative; 94270-95700
(At1g53520) OS=Arabidopsis thaliana GN=At1g53520 PE=2
SV=1
Length = 287

Score = 36.6 bits (83), Expect = 1.4
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 11/167 (6%)
Frame = +3

Query: 186 KEPFTGIEFDWKRNIRQAEAEGEYQLLGTAVRCMLGQCKFA--KARAYAVGLYV-ENVDE 356
+E T ++F KR++ LLGT R + KFA + YA G YV E++
Sbjct: 85 EETATSVKF--KRSVTLPGCSSPLSLLGTGFR----EKKFAIIGVKVYAAGYYVNESILS 138

Query: 357 GLWKVSGGDAR--------FQVLLSMQTPRNLLLVMDQDVAGHHIAKGFDRSLLPXXXXX 512
GL +G A F + Q ++L +V+ +DV G D ++ P
Sbjct: 139 GLSAWTGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDVDGKTFWDALDEAISPRIKSP 198

Query: 513 XXXXXXXXXXXLKEFTQCFNQEKLLKKGAEVCLVWRPDDTLVVIIDS 653
L F F Q + L KG+ + L W ++V + S
Sbjct: 199 SSEDTTA----LSTFRGIF-QNRPLNKGSVILLTWINTSNMLVSVSS 240


>tr|Q53B73|Q53B73_SOYBN Putative chalcone isomerase 3 OS=Glycine max
PE=2 SV=1
Length = 281

Score = 35.8 bits (81), Expect = 2.4
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 9/168 (5%)
Frame = +3

Query: 177 EKVKEPFTGIEFDWKRNIRQAEAEGEYQLLGTAVRCMLGQCKFAKARAYAVGLYVEN--- 347
E V+EP T ++F + ++ L GT R + + YA GLY++
Sbjct: 76 EYVEEPATNVKF--QTSLSFPGCSNSLTLFGTGYREKV--FAIIGVKVYAAGLYLDQSIA 131

Query: 348 VDEGLWK------VSGGDARFQVLLSMQTPRNLLLVMDQDVAGHHIAKGFDRSLLPXXXX 509
++ WK + G + F+ + ++L +++ +DV G K F +L
Sbjct: 132 LELNAWKGQSKEAIQGNSSLFETIFQSSFEKSLQIILVRDVDG----KTFWDALSDAISP 187

Query: 510 XXXXXXXXXXXXLKEFTQCFNQEKLLKKGAEVCLVWRPDDTLVVIIDS 653
L F F ++ LKKGA + L W L+V + S
Sbjct: 188 RIQQPTTTDETALTTFRGVF-LDRPLKKGAIIILTWLNPSGLLVSVSS 234


>tr|Q0U0I2|Q0U0I2_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_14701 PE=4 SV=2
Length = 445

Score = 35.8 bits (81), Expect = 2.4
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3

Query: 234 QAEAEGEYQLLGTAVRCMLGQCKFAKARAYAVGLYVENVDEG 359
Q ++ EYQLLG +R + F + + Y VGLYV+ D G
Sbjct: 187 QVSSDAEYQLLGLGIR----KVSFLRVQVYVVGLYVKTADIG 224


>tr|A6G8L0|A6G8L0_9DELT Putative uncharacterized protein
OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_38434 PE=4 SV=1
Length = 806

Score = 35.0 bits (79), Expect = 4.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2

Query: 154 RRSGELCWIAAKAARGAITFHLKRLRARCHAIEEEQLRVRWR 29
RR+ E+C + + GA++ RLRA+ ++ E L +RWR
Sbjct: 85 RRTPEICLLTTTSLYGAVSSQYNRLRAKLNSSTGEPLDIRWR 126