DK951292 |
Clone id |
TST38A01NGRL0011_A08 |
Library |
TST38 |
Length |
667 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_A08. 5' end sequence. |
Accession |
DK951292 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1993Contig1 |
Sequence |
GTTGAACTCTAGAGAGAGAGAGAGAGAGAGCGCTCGTCTCATTTGGGCTGCAATTCGAGC AGGCGTAGAGAAGATGAGCCACGTGACAGTTGCAGGTACGATTGGAGCTCCAAGCAATCT CTCTGTGCATTCGTTGCGGAACTGTAAGATTATACATCTTGTTAGGCATGCACAAGGCTA TCATAATGTGGTTGGGGAGCAGGACTACGAGGCTTATATGTCATATGACTATGTGGATGC AAGCGTAACGCCCTTGGGATGGGACCAGGTGGATAGGCTTCGTAGACACTTGGAAAAAAT CAACTTAACCCAAAAAGTTGAGCTAGTAGTCACGTCCCCGCTGATGAGGACTATGCAGAC TGCTGTAGGAGCTTTTGGTGGGCCCAAGTTTGATGAAAGTGACTCGTCACCTCCCTTGAT GGTGCAAAATGGTGGCGGAAGCAATTGTCCTGCTGTCTCTTCTTCAGGATGCCCACCTTT CATTGCTGTGGAGTTATGCAGAGAGCATATGGGCGTACATCCCTGCGACAAACGACAGTC TGTTAGCACTTATCGCACCATATTTCCATCTATTGACTTTTCAGAGATAGAAGTGGATGA TGACACTCTGTGGAAACCGGATGTAAGAGAGACAAACTCTGAATTGATCGATCGGGGGAC ACGTTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P36069 |
Definition |
sp|P36069|YKM8_YEAST Uncharacterized protein YKL128C OS=Saccharomyces cerevisiae |
Align length |
197 |
Score (bit) |
58.9 |
E-value |
2.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951292|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_A08, 5' (667 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P36069|YKM8_YEAST Uncharacterized protein YKL128C OS=Saccharo... 59 2e-08 sp|Q09676|YA03_SCHPO Uncharacterized protein C5H10.03 OS=Schizos... 42 0.004 sp|Q9NR97|TLR8_HUMAN Toll-like receptor 8 OS=Homo sapiens GN=TLR... 33 1.8 sp|P18278|DHET_ACEAC Alcohol dehydrogenase [acceptor] OS=Acetoba... 32 2.3 sp|Q55129|Y400_SYNY3 Uncharacterized protein sll0400 OS=Synechoc... 32 3.0 sp|P58682|TLR8_MOUSE Toll-like receptor 8 OS=Mus musculus GN=Tlr... 31 5.2 sp|Q9BZM4|N2DL3_HUMAN NKG2D ligand 3 OS=Homo sapiens GN=ULBP3 PE... 31 5.2 sp|Q18788|MAN12_CAEEL Mannosyl-oligosaccharide 1,2-alpha-mannosi... 31 5.2 sp|P96789|6PGD_LACLM 6-phosphogluconate dehydrogenase, decarboxy... 31 5.2 sp|O94420|YQGD_SCHPO Probable phosphoglycerate mutase C1620.13 O... 31 6.8 sp|Q95MH5|VDR_SAGOE Vitamin D3 receptor OS=Saguinus oedipus GN=V... 31 6.8 sp|Q9QXN0|SHRM3_MOUSE Protein Shroom3 OS=Mus musculus GN=Shroom3... 31 6.8 sp|O42637|CIA84_NEUCR Complex I intermediate-associated protein ... 31 6.8 sp|A8FEK5|AROC_BACP2 Chorismate synthase OS=Bacillus pumilus (st... 31 6.8 sp|Q6GNP2|Z652A_XENLA Zinc finger protein 652-A OS=Xenopus laevi... 30 8.8 sp|A1D611|MCA1B_NEOFI Metacaspase-1B OS=Neosartorya fischeri (st... 30 8.8 sp|Q4WYT0|MCA1B_ASPFU Metacaspase-1B OS=Aspergillus fumigatus GN... 30 8.8 sp|B0Y081|MCA1B_ASPFC Metacaspase-1B OS=Aspergillus fumigatus (s... 30 8.8 sp|A0LVS5|LPQB_ACIC1 Lipoprotein lpqB OS=Acidothermus cellulolyt... 30 8.9
>sp|P36069|YKM8_YEAST Uncharacterized protein YKL128C OS=Saccharomyces cerevisiae GN=YKL128C PE=1 SV=1 Length = 295
Score = 58.9 bits (141), Expect = 2e-08 Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 24/197 (12%) Frame = +2
Query: 137 RNCKIIHLVRHAQGYHNVV----GEQDYEAYMSY-------DYVDASVTPLGWDQVDRLR 283 R+ K++ L RH QGYHN G + ++AY S +++D+ +TPLG DQV R Sbjct: 51 RHYKLLILARHGQGYHNAAILRYGMEKWDAYWSLLSGDEHGEWLDSKLTPLGKDQVRRTG 110
Query: 284 RHL---EKINLTQKVELVVTSPLMRTMQTAVGAFGGPKFDESDSSPPLMVQNGGGSNCPA 454 ++ L + +SP+ R ++T + +S P++ + PA Sbjct: 111 SNVLLPMAKQLGMLPHVFFSSPMRRCLETFI-----------ESWTPVLAET---QELPA 156
Query: 455 VSSSGCPPFIAVELCREHMGVHPCDKR----------QSVSTYRTIFPSIDFSEIEVDDD 604 + +E RE +G H CDKR Q ST + +DD Sbjct: 157 GTKISTR---IIEGLRETLGSHTCDKRVAHSMAVDEYQDFSTESGHTVHWQYVPDYPEDD 213
Query: 605 TLWKPDVRETNSELIDR 655 LW PD RET +E+ R Sbjct: 214 ELWLPDHRETCAEMDKR 230
>sp|Q09676|YA03_SCHPO Uncharacterized protein C5H10.03 OS=Schizosaccharomyces pombe GN=SPAC5H10.03 PE=2 SV=1 Length = 219
Score = 41.6 bits (96), Expect = 0.004 Identities = 35/149 (23%), Positives = 62/149 (41%) Frame = +2
Query: 146 KIIHLVRHAQGYHNVVGEQDYEAYMSYDYVDASVTPLGWDQVDRLRRHLEKINLTQKVEL 325 K ++L+RH Q HNV ++D ++ D +T G +Q + L + LE + ++ Sbjct: 7 KTVYLIRHGQAQHNVGPDED------HNIRDPVLTSEGIEQCEALAKELESKQI--PIDG 58
Query: 326 VVTSPLMRTMQTAVGAFGGPKFDESDSSPPLMVQNGGGSNCPAVSSSGCPPFIAVELCRE 505 +V SP+ RT+QT + + + GG P S PF + Sbjct: 59 IVCSPMRRTLQT------------MEIALKKYLAEGGPDKVPVYIS----PFF------Q 96
Query: 506 HMGVHPCDKRQSVSTYRTIFPSIDFSEIE 592 +G PCD + ++P +F + Sbjct: 97 EVGHLPCDIGLELDKLNKLYPKYNFQSCQ 125
>sp|Q9NR97|TLR8_HUMAN Toll-like receptor 8 OS=Homo sapiens GN=TLR8 PE=2 SV=1 Length = 1041
Score = 32.7 bits (73), Expect = 1.8 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Frame = +2
Query: 173 QGYHNVVGEQD-YEAYMSYDYVDASVTPLGWDQVDRLRRHLEK 298 +GY ++ Q Y+AY+SYD DASVT W ++ LR HLE+ Sbjct: 868 KGYRSLSTSQTFYDAYISYDTKDASVT--DW-VINELRYHLEE 907
>sp|P18278|DHET_ACEAC Alcohol dehydrogenase [acceptor] OS=Acetobacter aceti GN=adhA PE=1 SV=1 Length = 742
Score = 32.3 bits (72), Expect = 2.3 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +2
Query: 161 VRHAQGYHNVVGEQDYEAYMSYDYVDASVTPLGWDQVDRLRRHLEK 298 +RH ++NVVG AY D D S+TP D+++ +R++L K Sbjct: 672 IRHQDAFYNVVGRGALTAY-GMDRFDTSMTP---DEIEAIRQYLIK 713
>sp|Q55129|Y400_SYNY3 Uncharacterized protein sll0400 OS=Synechocystis sp. (strain PCC 6803) GN=sll0400 PE=3 SV=1 Length = 164
Score = 32.0 bits (71), Expect = 3.0 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = +2
Query: 236 DASVTPLGWDQVDRLRRHLEKINLTQKVELVVTSPLMRTMQTA 364 D +T G D+ R+ + L+ I + + +L++TSPL+R QTA Sbjct: 22 DRQLTKKGKDKTQRVAQRLQAIGV--EFDLILTSPLVRAQQTA 62
>sp|P58682|TLR8_MOUSE Toll-like receptor 8 OS=Mus musculus GN=Tlr8 PE=2 SV=1 Length = 1032
Score = 31.2 bits (69), Expect = 5.2 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = +2
Query: 206 YEAYMSYDYVDASVTPLGWDQVDRLRRHLEK 298 Y+AY+SYD DASVT W ++ LR HLE+ Sbjct: 871 YDAYISYDTKDASVT--DW-VINELRYHLEE 898
>sp|Q9BZM4|N2DL3_HUMAN NKG2D ligand 3 OS=Homo sapiens GN=ULBP3 PE=1 SV=1 Length = 244
Score = 31.2 bits (69), Expect = 5.2 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +2
Query: 128 HSL-RNCKIIHLVRHAQGYHNVVGEQDYEAYMSYDYVDASVTPLG 259 HSL N IIHL RH Q + V + D + ++SYD V +G Sbjct: 32 HSLWYNFTIIHLPRHGQQWCEVQSQVDQKNFLSYDCGSDKVLSMG 76
>sp|Q18788|MAN12_CAEEL Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5 OS=Caenorhabditis elegans GN=C52E4.5 PE=1 SV=1 Length = 590
Score = 31.2 bits (69), Expect = 5.2 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 8/53 (15%) Frame = +2
Query: 191 VGEQDYE----AYMSYDYVDASVTPLGWDQVDRLRRHLEKI----NLTQKVEL 325 +G+ YE +Y+ +Y D + WD D +++H+ K+ NLT VEL Sbjct: 357 LGDSFYEYLIKSYVQSNYTDTQAKNMYWDVSDAIQKHMIKVSKQSNLTYTVEL 409
>sp|P96789|6PGD_LACLM 6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gnd PE=1 SV=3 Length = 472
Score = 31.2 bits (69), Expect = 5.2 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +2
Query: 545 STYRTIFPSIDFSEIEVDDDTLWKPDVRETNSELIDRGTRF 667 +T +++ P +D +I +D PD N+EL D G F Sbjct: 82 ATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINF 122
>sp|O94420|YQGD_SCHPO Probable phosphoglycerate mutase C1620.13 OS=Schizosaccharomyces pombe GN=SPCC1620.13 PE=2 SV=1 Length = 282
Score = 30.8 bits (68), Expect = 6.8 Identities = 20/69 (28%), Positives = 35/69 (50%) Frame = +2
Query: 158 LVRHAQGYHNVVGEQDYEAYMSYDYVDASVTPLGWDQVDRLRRHLEKINLTQKVELVVTS 337 LVRHA+ HNV G + +D+ +T G++Q +L + + +++ V +S Sbjct: 58 LVRHAESEHNVRG------IRAGARIDSELTVHGYNQAKKLAKSIRNLDIV----CVYSS 107
Query: 338 PLMRTMQTA 364 P R +TA Sbjct: 108 PQKRAKRTA 116
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6SU17 |
Definition |
tr|B6SU17|B6SU17_MAIZE Phosphoglycerate mutase-like protein OS=Zea mays |
Align length |
182 |
Score (bit) |
249.0 |
E-value |
8.0e-65 |
Report |
|