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DK951297
Clone id TST38A01NGRL0011_A13
Library
Length 368
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_A13. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
AAAAGCTACAAGACCTTGTACCAAACCTGGACAAGCAAGCTCACACTGCTGATATGCTTG
ATGAGGTAGTGGAATATGTAAAGCTTCTTAAGCGGCAAGTTGAGGAGCTTTCGAAGCCAA
GCTGTGAGTGTAATGGAATGTGTCAGAAAAAGGGAAACGTTTCTGTTGAAACATAGTTGA
ACCGCCAGCTGGTTATGGACTTCATGAAAGAAATCAGTTGCACCGGCAGTTTTGGAAGGT
GATGGCCTTGTATATGGGTATGGAAGTAATGTATTAGCTATTCTTGTACAGTATGATGTA
TGGTAAGGCATTTATCAGAACATTTTGCAGTTAAAAAAAAAAAAAAAAAAAAAAACAAAA
AAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9M0R0
Definition sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana
Align length 43
Score (bit) 62.0
E-value 9.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951297|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_A13, 5'
         (332 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis...    62   9e-10
sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis...    58   1e-08
sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsi...    54   3e-07
sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsi...    53   4e-07
sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsi...    52   1e-06
sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsi...    46   5e-05
sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis...    44   2e-04
sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis...    44   3e-04
sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis...    42   0.001
sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis...    42   0.001
sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis t...    42   0.001
sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis...    41   0.002
sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis...    41   0.002
sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis...    40   0.003
sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis...    40   0.004
sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsi...    39   0.006
sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis...    39   0.006
sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thal...    39   0.008
sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis...    38   0.014
sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis...    38   0.014
sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis...    38   0.014
sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis t...    38   0.014
sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis t...    38   0.014
sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis th...    38   0.018
sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis ...    37   0.024
sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis...    37   0.024
sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis ...    37   0.024
sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis ...    37   0.031
sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis th...    37   0.031
sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis th...    37   0.031

>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis
           thaliana GN=BHLH81 PE=2 SV=1
          Length = 262

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 27/43 (62%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSKPSCEC 131
           KLQ+LVPN+DKQ +TADML+E VEYVK+L+RQ++EL++    C
Sbjct: 212 KLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRC 254


>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis
           thaliana GN=BHLH80 PE=2 SV=1
          Length = 259

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSKPSCECNGMCQKK 152
           +LQ+LVPN+DKQ +TADML+E VEYVK L+ Q++EL++    C   C+ K
Sbjct: 209 RLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQKRCK--CKPK 256


>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis
           thaliana GN=BHLH130 PE=2 SV=1
          Length = 359

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSKPSCECNGMCQKKGNV 161
           KLQ+LVPN+DKQ +T+DMLD  V+Y+K L+RQ + L+     C  M ++K ++
Sbjct: 307 KLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKEKKSI 359


>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis
           thaliana GN=BHLH122 PE=2 SV=1
          Length = 379

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEEL--SKPSCECN 134
           KLQDLVPN+D Q +TADMLD  V+Y+K L+ QV+ L  S+  C C+
Sbjct: 332 KLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCS 377


>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis
           thaliana GN=BHLH128 PE=2 SV=1
          Length = 362

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSKPSCECNGMCQKK 152
           KLQDLVPN+DKQ   +DMLD  V+++K L+ Q++ L K    C   C +K
Sbjct: 311 KLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEK 360


>sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis
           thaliana GN=BHLH129 PE=2 SV=2
          Length = 297

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVE 104
           KLQ+LVPN+DKQ   ADMLD  VE++K L+ QVE
Sbjct: 261 KLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVE 294


>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis
           thaliana GN=BHLH77 PE=2 SV=1
          Length = 371

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 24/56 (42%), Positives = 32/56 (57%)
 Frame = +3

Query: 6   LQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSKPSCECNGMCQKKGNVSVET 173
           LQDLVP  ++    A MLDE++ YV+ L+RQVE LS      N   +   N S+ T
Sbjct: 220 LQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLST 275


>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis
           thaliana GN=BHLH63 PE=2 SV=1
          Length = 335

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +3

Query: 6   LQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELS 113
           LQDLVP  DK    A MLDE++ YV+ L+RQ+E LS
Sbjct: 201 LQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236


>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis
           thaliana GN=BHLH64 PE=2 SV=3
          Length = 337

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +3

Query: 6   LQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELS 113
           LQD+VP  +K    A MLDE++ YV+ L+RQVE LS
Sbjct: 214 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249


>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis
           thaliana GN=BHLH49 PE=2 SV=1
          Length = 486

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +3

Query: 6   LQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELS 113
           LQDLVP  +K    A MLDE++ YV+ L+RQVE LS
Sbjct: 332 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367
tr_hit_id A9TNI8
Definition tr|A9TNI8|A9TNI8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 51
Score (bit) 61.6
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951297|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_A13, 5'
         (332 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TNI8|A9TNI8_PHYPA Predicted protein OS=Physcomitrella paten...    62   2e-08
tr|A9TEC7|A9TEC7_PHYPA Predicted protein OS=Physcomitrella paten...    60   6e-08
tr|A7QLZ6|A7QLZ6_VITVI Chromosome chr18 scaffold_122, whole geno...    60   6e-08
tr|A9SIU5|A9SIU5_PHYPA Predicted protein (Fragment) OS=Physcomit...    59   9e-08
tr|A9RXJ9|A9RXJ9_PHYPA Predicted protein OS=Physcomitrella paten...    59   9e-08
tr|Q0J0Q4|Q0J0Q4_ORYSJ Os09g0487900 protein OS=Oryza sativa subs...    57   5e-07
tr|A3C044|A3C044_ORYSJ Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|A2Z2K2|A2Z2K2_ORYSI Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|B6TUA5|B6TUA5_MAIZE Helix-loop-helix DNA-binding domain conta...    57   6e-07
tr|Q7F1Y1|Q7F1Y1_ORYSJ B1065G12.3 protein OS=Oryza sativa subsp....    56   1e-06
tr|Q5N8U8|Q5N8U8_ORYSJ cDNA clone:J013149F02, full insert sequen...    56   1e-06
tr|B8A7R5|B8A7R5_ORYSI Putative uncharacterized protein OS=Oryza...    56   1e-06
tr|A9T2I8|A9T2I8_PHYPA Predicted protein OS=Physcomitrella paten...    56   1e-06
tr|A3A0L2|A3A0L2_ORYSJ Putative uncharacterized protein OS=Oryza...    56   1e-06
tr|Q8S490|Q8S490_ORYSA Transcription factor RAU1 (Fragment) OS=O...    55   1e-06
tr|Q6Z3R6|Q6Z3R6_ORYSJ Os08g0506700 protein OS=Oryza sativa subs...    55   1e-06
tr|A2YWU4|A2YWU4_ORYSI Putative uncharacterized protein OS=Oryza...    55   1e-06
tr|Q9SQ79|Q9SQ79_PINTA Helix-loop-helix protein 1A OS=Pinus taed...    54   4e-06
tr|A7QWW1|A7QWW1_VITVI Chromosome chr13 scaffold_210, whole geno...    54   4e-06
tr|A7PW94|A7PW94_VITVI Chromosome chr8 scaffold_34, whole genome...    54   4e-06
tr|A7NZU3|A7NZU3_VITVI Chromosome chr6 scaffold_3, whole genome ...    54   4e-06
tr|A5AWW8|A5AWW8_VITVI Putative uncharacterized protein OS=Vitis...    54   4e-06
tr|A9TND7|A9TND7_PHYPA Predicted protein OS=Physcomitrella paten...    54   5e-06
tr|B6TY97|B6TY97_MAIZE Helix-loop-helix DNA-binding domain conta...    53   7e-06
tr|B6T6H6|B6T6H6_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1       53   7e-06
tr|B6SW57|B6SW57_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1       53   9e-06
tr|A9T8Y5|A9T8Y5_PHYPA Predicted protein (Fragment) OS=Physcomit...    53   9e-06
tr|A7QS45|A7QS45_VITVI Chromosome chr5 scaffold_156, whole genom...    51   3e-05
tr|Q0DZR0|Q0DZR0_ORYSJ Os02g0603600 protein (Fragment) OS=Oryza ...    49   1e-04
tr|B8AF19|B8AF19_ORYSI Putative uncharacterized protein OS=Oryza...    49   1e-04

>tr|A9TNI8|A9TNI8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_148201 PE=4 SV=1
          Length = 144

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSKPSCECNGMCQKKG 155
           KLQDLVP++D+Q +TADMLD+ VEYVK L++QV+ELSK   E   + ++ G
Sbjct: 91  KLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQVQELSKTVAELQQLQERLG 141


>tr|A9TEC7|A9TEC7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169585 PE=4 SV=1
          Length = 517

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELS 113
           KLQDLVP++DKQ +T+DMLDE VEYVK L+RQV+ELS
Sbjct: 411 KLQDLVPSMDKQTNTSDMLDETVEYVKSLQRQVQELS 447


>tr|A7QLZ6|A7QLZ6_VITVI Chromosome chr18 scaffold_122, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00001847001
           PE=4 SV=1
          Length = 181

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 26/49 (53%), Positives = 40/49 (81%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSKPSCECNGMCQK 149
           KLQ+LVPN+DKQ +TADML+E VEYVK L+++++ELS+   +C  + ++
Sbjct: 133 KLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSEHQKKCTCLARE 181


>tr|A9SIU5|A9SIU5_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_130556 PE=4 SV=1
          Length = 120

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELS 113
           +LQDLVPN+DKQ +T+DMLDE VEYVK L+R+V+ELS
Sbjct: 60  RLQDLVPNMDKQTNTSDMLDETVEYVKSLQRKVQELS 96


>tr|A9RXJ9|A9RXJ9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_121037 PE=4 SV=1
          Length = 95

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSK 116
           KLQDLVPN+DKQ +TADMLDE VEYVK L+ QV++LS+
Sbjct: 43  KLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQVKDLSE 80


>tr|Q0J0Q4|Q0J0Q4_ORYSJ Os09g0487900 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0487900 PE=4 SV=1
          Length = 401

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEEL--SKPSCECNGMCQK 149
           KLQ+LVPN++KQ +TADMLD  V+Y+K L++QV+ L  S+ SC C+   QK
Sbjct: 347 KLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSRSSCTCSASKQK 397


>tr|A3C044|A3C044_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028666 PE=4 SV=1
          Length = 379

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEEL--SKPSCECNGMCQK 149
           KLQ+LVPN++KQ +TADMLD  V+Y+K L++QV+ L  S+ SC C+   QK
Sbjct: 325 KLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSRSSCTCSASKQK 375


>tr|A2Z2K2|A2Z2K2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31842 PE=4 SV=1
          Length = 400

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEEL--SKPSCECNGMCQK 149
           KLQ+LVPN++KQ +TADMLD  V+Y+K L++QV+ L  S+ SC C+   QK
Sbjct: 346 KLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSRSSCTCSASKQK 396


>tr|B6TUA5|B6TUA5_MAIZE Helix-loop-helix DNA-binding domain
           containing protein OS=Zea mays PE=2 SV=1
          Length = 359

 Score = 56.6 bits (135), Expect = 6e-07
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEELSKPSCEC 131
           KLQDLVPN+DKQ +T+DMLD  V+Y+K LK QVE+L      C
Sbjct: 308 KLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQVEKLKHDQANC 350


>tr|Q7F1Y1|Q7F1Y1_ORYSJ B1065G12.3 protein OS=Oryza sativa subsp.
           japonica GN=B1065G12.3 PE=4 SV=1
          Length = 234

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = +3

Query: 3   KLQDLVPNLDKQAHTADMLDEVVEYVKLLKRQVEEL--SKPSCECNG 137
           KLQDLVPN+DKQ +T+DMLD  V Y+K L+ QVE+L   + +C C+G
Sbjct: 184 KLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQANCTCSG 230