DK951298 |
Clone id |
TST38A01NGRL0011_A14 |
Library |
TST38 |
Length |
633 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_A14. 5' end sequence. |
Accession |
DK951298 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
AAAGACGCAGCTTTAAAACTACTGAATTAAGTACATTGCAGAATGATAGCTGTTACACAA ACTCTTGCTTTTTTGGCTTTTGCAGCTTTGTTAGCGAGCACATTGAGACATTGGAGGAGA TTGATATGGAGTATCGGGAGCTTGCATATGCGTCTGGAATCGAAGAATGGGGCCGTGTGC CTGCACTAGGATGTGAAAACTCTTTTATAAATGACCTTGCAGATGCGGTAATCGAGGAAC TACAGAAATTCAAAGCCATTGATGAACCCACTAAAATTCCTGTCTGGACCATCTCAAGAA CACTGCAAGATTACTTTCTGCCCTATGGTGGGAGAGCTTGGATGGAATGGCTTTCTGGAG GCTATTAATGGCACTGACCATTGTCACTCTGCAGTGTGTCAACACTTAATATAGCTAGTG ATACATATTGATAAATAGCCACTTGTATACATACTGTCAACACACAAATTCCAGTAGAAG CTTGGAGAATACTCAAGTTTCAACAATCTGCCTCCATAGTAGCTTCCAGCTAACGCACAT GTCAACGCTTACCCACATGACAGTTTTTGTATAGTGTACCTCAGTTGCATTTTTTTGTAG TGTTAGAGAAATAAATCATATTCTTATTGAATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P42045 |
Definition |
sp|P42045|HEMH_HORVU Ferrochelatase-2, chloroplastic OS=Hordeum vulgare |
Align length |
59 |
Score (bit) |
94.4 |
E-value |
4.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951298|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_A14, 5' (633 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P42045|HEMH_HORVU Ferrochelatase-2, chloroplastic OS=Hordeum ... 94 4e-19 sp|P42043|HEMH1_ARATH Ferrochelatase-1, chloroplastic/mitochondr... 93 1e-18 sp|Q0DIV0|HEMH_ORYSJ Ferrochelatase-2, chloroplastic OS=Oryza sa... 90 1e-17 sp|A2Y3Q5|HEMH_ORYSI Ferrochelatase-2, chloroplastic OS=Oryza sa... 90 1e-17 sp|P42044|HEMH_CUCSA Ferrochelatase-2, chloroplastic OS=Cucumis ... 89 2e-17 sp|O04921|HEMH2_ARATH Ferrochelatase-2, chloroplastic OS=Arabido... 85 3e-16 sp|Q10WR6|HEMH_TRIEI Ferrochelatase OS=Trichodesmium erythraeum ... 70 7e-12 sp|Q5N2B2|HEMH_SYNP6 Ferrochelatase OS=Synechococcus sp. (strain... 67 6e-11 sp|Q31S00|HEMH_SYNE7 Ferrochelatase OS=Synechococcus elongatus (... 67 6e-11 sp|Q7NMC7|HEMH_GLOVI Ferrochelatase OS=Gloeobacter violaceus GN=... 65 2e-10 sp|Q8DGU6|HEMH_THEEB Ferrochelatase OS=Thermosynechococcus elong... 65 3e-10 sp|A5GS98|HEMH_SYNR3 Ferrochelatase OS=Synechococcus sp. (strain... 65 4e-10 sp|B0JRN7|HEMH_MICAN Ferrochelatase OS=Microcystis aeruginosa (s... 65 4e-10 sp|P54225|HEMH_SYNY3 Ferrochelatase OS=Synechocystis sp. (strain... 64 6e-10 sp|Q8YQR8|HEMH_ANASP Ferrochelatase OS=Anabaena sp. (strain PCC ... 64 8e-10 sp|Q0I8L9|HEMH_SYNS3 Ferrochelatase OS=Synechococcus sp. (strain... 63 1e-09 sp|Q31C09|HEMH_PROM9 Ferrochelatase OS=Prochlorococcus marinus (... 62 2e-09 sp|Q7U5G0|HEMH_SYNPX Ferrochelatase OS=Synechococcus sp. (strain... 62 3e-09 sp|Q2JHZ4|HEMH_SYNJB Ferrochelatase OS=Synechococcus sp. GN=hemH... 61 4e-09 sp|Q2JVK5|HEMH_SYNJA Ferrochelatase OS=Synechococcus sp. (strain... 61 4e-09 sp|Q3ALP2|HEMH_SYNSC Ferrochelatase OS=Synechococcus sp. (strain... 60 7e-09 sp|A5GJF5|HEMH_SYNPW Ferrochelatase OS=Synechococcus sp. (strain... 60 7e-09 sp|Q46GQ1|HEMH_PROMT Ferrochelatase OS=Prochlorococcus marinus (... 60 7e-09 sp|A2BQ06|HEMH_PROMS Ferrochelatase OS=Prochlorococcus marinus (... 60 7e-09 sp|Q7V6C6|HEMH_PROMM Ferrochelatase OS=Prochlorococcus marinus (... 60 7e-09 sp|A2C7Q7|HEMH_PROM3 Ferrochelatase OS=Prochlorococcus marinus (... 60 7e-09 sp|A2C0Y4|HEMH_PROM1 Ferrochelatase OS=Prochlorococcus marinus (... 60 7e-09 sp|A3PBP9|HEMH_PROM0 Ferrochelatase OS=Prochlorococcus marinus (... 60 1e-08 sp|Q7VD58|HEMH_PROMA Ferrochelatase OS=Prochlorococcus marinus G... 59 2e-08 sp|A8G3P0|HEMH_PROM2 Ferrochelatase OS=Prochlorococcus marinus (... 59 2e-08
>sp|P42045|HEMH_HORVU Ferrochelatase-2, chloroplastic OS=Hordeum vulgare GN=HEMH PE=2 SV=1 Length = 484
Score = 94.4 bits (233), Expect = 4e-19 Identities = 46/59 (77%), Positives = 50/59 (84%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEELQKFKAI 260 SFVSEHIETLEEIDMEYRELA SGIE WGRVPALGC +SFI+DLADAV+E L A+ Sbjct: 380 SFVSEHIETLEEIDMEYRELALESGIENWGRVPALGCTSSFISDLADAVVEALPSASAM 438
>sp|P42043|HEMH1_ARATH Ferrochelatase-1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=HEM15 PE=2 SV=1 Length = 466
Score = 93.2 bits (230), Expect = 1e-18 Identities = 46/65 (70%), Positives = 50/65 (76%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEELQKFKAID 263 SFVSEHIETLEEIDMEYRELA SG+E WGRVPALG SFI DLADAVIE L +A+ Sbjct: 361 SFVSEHIETLEEIDMEYRELALESGVENWGRVPALGLTPSFITDLADAVIESLPSAEAMS 420
Query: 264 EPTKI 278 P + Sbjct: 421 NPNAV 425
>sp|Q0DIV0|HEMH_ORYSJ Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMH PE=2 SV=1 Length = 526
Score = 89.7 bits (221), Expect = 1e-17 Identities = 43/53 (81%), Positives = 47/53 (88%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEEL 242 SFVSEHIETLEEID+EY+ELA SGI+ WGRVPALGCE +FI DLADAVIE L Sbjct: 385 SFVSEHIETLEEIDVEYKELALESGIKHWGRVPALGCEPTFITDLADAVIESL 437
>sp|A2Y3Q5|HEMH_ORYSI Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. indica GN=HEMH PE=2 SV=2 Length = 526
Score = 89.7 bits (221), Expect = 1e-17 Identities = 43/53 (81%), Positives = 47/53 (88%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEEL 242 SFVSEHIETLEEID+EY+ELA SGI+ WGRVPALGCE +FI DLADAVIE L Sbjct: 385 SFVSEHIETLEEIDVEYKELALESGIKHWGRVPALGCEPTFITDLADAVIESL 437
>sp|P42044|HEMH_CUCSA Ferrochelatase-2, chloroplastic OS=Cucumis sativus GN=HEMH PE=2 SV=1 Length = 514
Score = 88.6 bits (218), Expect = 2e-17 Identities = 43/59 (72%), Positives = 48/59 (81%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEELQKFKAI 260 SFVSEHIETLEEIDMEY+ LA SGI+ WGRVPAL C +SFI+DLADAVIE L A+ Sbjct: 386 SFVSEHIETLEEIDMEYKHLALESGIQNWGRVPALNCNSSFISDLADAVIEALPSATAL 444
>sp|O04921|HEMH2_ARATH Ferrochelatase-2, chloroplastic OS=Arabidopsis thaliana GN=At2g30390 PE=2 SV=1 Length = 512
Score = 85.1 bits (209), Expect = 3e-16 Identities = 41/53 (77%), Positives = 46/53 (86%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEEL 242 SFVSEHIETLEEID+EY+ELA SGI+ WGRVPALG E FI+DLADAV+E L Sbjct: 372 SFVSEHIETLEEIDVEYKELALKSGIKNWGRVPALGTEPMFISDLADAVVESL 424
>sp|Q10WR6|HEMH_TRIEI Ferrochelatase OS=Trichodesmium erythraeum (strain IMS101) GN=hemH PE=3 SV=1 Length = 387
Score = 70.5 bits (171), Expect = 7e-12 Identities = 38/64 (59%), Positives = 46/64 (71%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEELQKFKAID 263 SFVSEHIETL+EID+EYRELA +GI + RVPAL FINDLAD V+E A+D Sbjct: 270 SFVSEHIETLQEIDIEYRELAEEAGISNFYRVPALNTHPVFINDLADLVME------ALD 323
Query: 264 EPTK 275 P++ Sbjct: 324 APSR 327
>sp|Q5N2B2|HEMH_SYNP6 Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemH PE=3 SV=1 Length = 387
Score = 67.4 bits (163), Expect = 6e-11 Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEELQKFK-AI 260 SFVSEHIETLEEID+EYRE+A +GIE + RVPAL FI DL+D V + L++ + + Sbjct: 270 SFVSEHIETLEEIDIEYREIAEEAGIERFLRVPALNTHPLFIQDLSDLVEQTLEQPRFRL 329
Query: 261 DEPTKIP 281 ++ T +P Sbjct: 330 EDVTLLP 336
>sp|Q31S00|HEMH_SYNE7 Ferrochelatase OS=Synechococcus elongatus (strain PCC 7942) GN=hemH PE=3 SV=1 Length = 387
Score = 67.4 bits (163), Expect = 6e-11 Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEELQKFK-AI 260 SFVSEHIETLEEID+EYRE+A +GIE + RVPAL FI DL+D V + L++ + + Sbjct: 270 SFVSEHIETLEEIDIEYREIAEEAGIERFLRVPALNTHPLFIQDLSDLVEQTLEQPRFRL 329
Query: 261 DEPTKIP 281 ++ T +P Sbjct: 330 EDVTLLP 336
>sp|Q7NMC7|HEMH_GLOVI Ferrochelatase OS=Gloeobacter violaceus GN=hemH PE=3 SV=1 Length = 327
Score = 65.5 bits (158), Expect = 2e-10 Identities = 31/53 (58%), Positives = 42/53 (79%) Frame = +3
Query: 84 SFVSEHIETLEEIDMEYRELAYASGIEEWGRVPALGCENSFINDLADAVIEEL 242 SF+SEHIETL+EI++EYRE+A A+GI ++ R AL +FI+DLA+ VIE L Sbjct: 270 SFISEHIETLQEIEIEYREVAEAAGIHDFRRAKALNVNKTFIDDLAEMVIENL 322
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q69TB1 |
Definition |
tr|Q69TB1|Q69TB1_ORYSJ Ferrochelatase OS=Oryza sativa subsp. japonica |
Align length |
59 |
Score (bit) |
93.6 |
E-value |
9.0e-18 |
Report |
|