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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951311
Clone id TST38A01NGRL0011_B04
Library
Length 666
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_B04. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
TGGTTGAATCCCGCTATGAGTGATACGGCTATTCGCGTTCATGGGAGCTGTTGGAGCAGA
ACTTTGCCAGATCGACCAAAGGGTGTCTCTGCCAGGCGGGGATTCTGCTGCTTCTTGCGC
AGATCTACCGTGAGCTGGGTTGGTCTGCACTGCACTGCTTTCCCTGTTTCCAGACAGCAG
AGTTGCATCGTGGGGCGCAACATACATGGCAAGGCCGCAACAAGAGCTCTATTTACAGGC
ATCGTTGAAGAAATGGGCACCGTCGCCTCTGTTGGTCCTGTTGATGATGGATTTGAGATG
ACCATCAATGCGTCTGTTGCCCTTGATGGTGTCAAGCTTGGCGATAGCATCGCTGTGAAT
GGCACATGCCTCACTGTCACCCGCTTCGATCAATCATCTTTTTCGGTTGGCCTTGCCCCT
GAAACTTTACGCAGGACCTCTCTAGGTGAGGTTACCCCTGGTTTTTATGTCAATCTTGAG
CGATCTCTCCAGCCCACCTCTCGAATGGGTGGCCACTTTGTTCAGGGCCATGTGGATGGC
ACCGGTACCATTGTTTCACTGAACAAAGAGGGTGACTCTTTGTGGGTAAAGGTCAGAACG
TCAGTAGACGTGTTGAGATACATAGTTCCAAAGGGTTACATTGCTGTGGACGGGACAAGC
CTTACC
■■Homology search results ■■ -
sp_hit_id Q9Y7P0
Definition sp|Q9Y7P0|RISA_SCHPO Riboflavin synthase alpha chain OS=Schizosaccharomyces pombe
Align length 148
Score (bit) 150.0
E-value 6.0e-36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951311|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_B04, 5'
         (652 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Y7P0|RISA_SCHPO Riboflavin synthase alpha chain OS=Schizosa...   150   6e-36
sp|P50854|RISA_ACTPL Riboflavin synthase alpha chain OS=Actinoba...   145   1e-34
sp|A5DB51|RISA_PICGU Riboflavin synthase alpha chain OS=Pichia g...   139   1e-32
sp|P16440|RISA_BACSU Riboflavin synthase alpha chain OS=Bacillus...   136   1e-31
sp|P38145|RISA_YEAST Riboflavin synthase alpha chain OS=Saccharo...   133   7e-31
sp|Q44680|RISA_BACAM Riboflavin synthase alpha chain OS=Bacillus...   133   7e-31
sp|O67604|RISA_AQUAE Riboflavin synthase alpha chain OS=Aquifex ...   123   7e-28
sp|P65327|RISA_MYCTU Riboflavin synthase alpha chain OS=Mycobact...   117   7e-26
sp|P65328|RISA_MYCBO Riboflavin synthase alpha chain OS=Mycobact...   117   7e-26
sp|P51961|RISA_PHOPO Riboflavin synthase alpha chain OS=Photobac...   116   9e-26
sp|Q01993|RISA_PHOLE Riboflavin synthase alpha chain OS=Photobac...   115   2e-25
sp|Q8KA22|RISA_BUCAP Riboflavin synthase alpha chain OS=Buchnera...   104   5e-22
sp|Q9PJZ1|RISA_CHLMU Riboflavin synthase alpha chain OS=Chlamydi...    99   2e-20
sp|Q89AX1|RISA_BUCBP Riboflavin synthase alpha chain OS=Buchnera...    95   3e-19
sp|P45273|RISA_HAEIN Riboflavin synthase alpha chain OS=Haemophi...    95   4e-19
sp|O84410|RISA_CHLTR Riboflavin synthase alpha chain OS=Chlamydi...    95   4e-19
sp|P57212|RISA_BUCAI Riboflavin synthase alpha chain OS=Buchnera...    95   4e-19
sp|P0AFU9|RISA_SHIFL Riboflavin synthase alpha chain OS=Shigella...    94   5e-19
sp|P0AFU8|RISA_ECOLI Riboflavin synthase alpha chain OS=Escheric...    94   5e-19
sp|Q9Z820|RISA_CHLPN Riboflavin synthase alpha chain OS=Chlamydi...    92   3e-18
sp|P21578|LUXY_VIBFI Yellow fluorescent protein OS=Vibrio fische...    54   5e-07
sp|P15143|PO2F1_CHICK POU domain, class 2, transcription factor ...    35   0.34 
sp|P0A608|SODC_MYCTU Superoxide dismutase [Cu-Zn] OS=Mycobacteri...    35   0.45 
sp|P0A609|SODC_MYCBO Superoxide dismutase [Cu-Zn] OS=Mycobacteri...    35   0.45 
sp|Q96C11|FGGY_HUMAN FGGY carbohydrate kinase domain-containing ...    35   0.45 
sp|Q1ZXH8|GXCDD_DICDI Guanine exchange factor for Rac 30 OS=Dict...    33   1.3  
sp|O13967|BGS2_SCHPO 1,3-beta-glucan synthase component bgs2 OS=...    33   1.7  
sp|Q29076|PO2F1_PIG POU domain, class 2, transcription factor 1 ...    32   2.2  
sp|Q2M3V2|ANR43_HUMAN Ankyrin repeat domain-containing protein 4...    32   2.2  
sp|Q13641|TPBG_HUMAN Trophoblast glycoprotein OS=Homo sapiens GN...    32   3.8  

>sp|Q9Y7P0|RISA_SCHPO Riboflavin synthase alpha chain
           OS=Schizosaccharomyces pombe GN=rib5 PE=1 SV=1
          Length = 208

 Score =  150 bits (379), Expect = 6e-36
 Identities = 82/148 (55%), Positives = 104/148 (70%), Gaps = 2/148 (1%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASV-GPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFS 391
           +FTG+VE +G V  V G +D+GF M I A   LD    GDSIAVNGTCLTVT FD+  F+
Sbjct: 1   MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRYHFT 60

Query: 392 VGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLW 571
           VG+APE+LR T+LG+   G  VNLER++  ++RMGGHFVQGHVD    IV   ++G+++ 
Sbjct: 61  VGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEAID 120

Query: 572 VKVR-TSVDVLRYIVPKGYIAVDGTSLT 652
              R     VL+YIV KGYIA+DGTSLT
Sbjct: 121 FTFRPRDPFVLKYIVYKGYIALDGTSLT 148



 Score = 33.1 bits (74), Expect = 1.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +2

Query: 335 IAVNGTCLTVTRFDQSSFSVGLAPETLRRTSLGEVTPGFYVNLE 466
           IA++GT LT+T  D S+FS+ +   T  +  + +   G  VN+E
Sbjct: 140 IALDGTSLTITHVDDSTFSIMMISYTQSKVIMAKKNVGDLVNVE 183


>sp|P50854|RISA_ACTPL Riboflavin synthase alpha chain
           OS=Actinobacillus pleuropneumoniae GN=ribE PE=3 SV=1
          Length = 215

 Score =  145 bits (367), Expect = 1e-34
 Identities = 70/146 (47%), Positives = 96/146 (65%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFSV 394
           +FTGI+EE+G +A +    +   +TINA+  L  V LGD+IAVNG CLTVT F  + F+ 
Sbjct: 1   MFTGIIEEVGKIAQIHKQGEFAVVTINATKVLQDVHLGDTIAVNGVCLTVTSFSSNQFTA 60

Query: 395 GLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLWV 574
            +  ETL+RTSLGE+     VNLER++    R GGH V GH+DGTG I  +    +S W 
Sbjct: 61  DVMSETLKRTSLGELKSNSPVNLERAMAANGRFGGHIVSGHIDGTGEIAEITPAHNSTWY 120

Query: 575 KVRTSVDVLRYIVPKGYIAVDGTSLT 652
           +++TS  ++RYI+ KG I +DG SLT
Sbjct: 121 RIKTSPKLMRYIIEKGSITIDGISLT 146



 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGD-SIAVNGTCLTVTRFDQSSFS 391
           + +G ++  G +A + P  +     I  S  L    +   SI ++G  LTV   D  SF 
Sbjct: 97  IVSGHIDGTGEIAEITPAHNSTWYRIKTSPKLMRYIIEKGSITIDGISLTVVDTDDESFR 156

Query: 392 VGLAPETLRRTSLGEVTPGFYVNLERSL 475
           V + P T++ T+LG    G  VNLE  +
Sbjct: 157 VSIIPHTIKETNLGSKKIGSIVNLENDI 184


>sp|A5DB51|RISA_PICGU Riboflavin synthase alpha chain OS=Pichia
           guilliermondii GN=RIB5 PE=2 SV=3
          Length = 239

 Score =  139 bits (351), Expect = 1e-32
 Identities = 82/157 (52%), Positives = 105/157 (66%), Gaps = 11/157 (7%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVD------DGFEMTI-NASVALDGVKLGDSIAVNGTCLTVTRF 373
           +FTG+VE +GTV  V   D      DG  M I + S  L+ V+LGDSI  NG CLTVT F
Sbjct: 1   MFTGLVEHIGTVLQVTEKDTTASGGDGVSMVIGDCSKILEDVQLGDSICTNGVCLTVTEF 60

Query: 374 D--QSSFSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSL 547
           D  +S F VG++PETLRR+ LGE+ PG  VNLER+++   RMGGH VQGHVD   TIV+ 
Sbjct: 61  DMARSQFKVGISPETLRRSDLGELKPGSKVNLERAVKADVRMGGHVVQGHVDTIATIVNR 120

Query: 548 NKEGDSL--WVKVRTSVDVLRYIVPKGYIAVDGTSLT 652
             +G+++    K+R S    +YIV KG+IA+DGTSLT
Sbjct: 121 RGDGNAINFTFKLRDS-QYGKYIVEKGFIAIDGTSLT 156



 Score = 30.4 bits (67), Expect = 8.5
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 335 IAVNGTCLTVTRFD--QSSFSVGLAPETLRRTSLGEVTPGFYVNLERSL 475
           IA++GT LTVT  D  QS FS+ +   T  +  +     G  VN+E  L
Sbjct: 148 IAIDGTSLTVTDVDHEQSEFSISMVSYTQEKVIMPLKNSGDSVNIEVDL 196


>sp|P16440|RISA_BACSU Riboflavin synthase alpha chain OS=Bacillus
           subtilis GN=ribE PE=1 SV=2
          Length = 215

 Score =  136 bits (342), Expect = 1e-31
 Identities = 67/146 (45%), Positives = 95/146 (65%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFSV 394
           +FTGI+EE GT+ S+        +TI  S  L+ V LGDSIAVNG CLTVT F ++ F+V
Sbjct: 1   MFTGIIEETGTIESMKKAGHAMALTIKCSKILEDVHLGDSIAVNGICLTVTDFTKNQFTV 60

Query: 395 GLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLWV 574
            + PET++ TSL ++T G  VNLER++    R GGHFV GHVDGT  I  + ++ ++++ 
Sbjct: 61  DVMPETVKATSLNDLTKGSKVNLERAMAANGRFGGHFVSGHVDGTAEITRIEEKSNAVYY 120

Query: 575 KVRTSVDVLRYIVPKGYIAVDGTSLT 652
            ++    + + +V KG I VDG SLT
Sbjct: 121 DLKMDPSLTKTLVLKGSITVDGVSLT 146



 Score = 33.5 bits (75), Expect = 1.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +2

Query: 323 LGDSIAVNGTCLTVTRFDQSSFSVGLAPETLRRTSLGEVTPGFYVNLE 466
           L  SI V+G  LT+    + + ++ L P T+  T   E T G  VN+E
Sbjct: 134 LKGSITVDGVSLTIFGLTEDTVTISLIPHTISETIFSEKTIGSKVNIE 181


>sp|P38145|RISA_YEAST Riboflavin synthase alpha chain
           OS=Saccharomyces cerevisiae GN=RIB5 PE=1 SV=1
          Length = 238

 Score =  133 bits (335), Expect = 7e-31
 Identities = 75/154 (48%), Positives = 96/154 (62%), Gaps = 8/154 (5%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDD------GFEMTI-NASVALDGVKLGDSIAVNGTCLTVTRF 373
           +FTGIVE MGTV    P DD      G  +TI NA   L    +GDSIAVNG CLTVT F
Sbjct: 1   MFTGIVECMGTVLENNPYDDSESGGQGVSITIGNAGSILTDCHVGDSIAVNGVCLTVTEF 60

Query: 374 DQSSFSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNK 553
           +  SF VG++PET++R+++     G  VNLER++    R GGH+VQGHVD    IVS   
Sbjct: 61  NNDSFKVGISPETIKRSNVASWIQGTQVNLERAVSQDVRFGGHYVQGHVDTVANIVSRRP 120

Query: 554 EGDSLWVKVR-TSVDVLRYIVPKGYIAVDGTSLT 652
           EG+S+    +    +  +YIV KG+I +DGTSLT
Sbjct: 121 EGNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLT 154


>sp|Q44680|RISA_BACAM Riboflavin synthase alpha chain OS=Bacillus
           amyloliquefaciens GN=ribE PE=3 SV=1
          Length = 215

 Score =  133 bits (335), Expect = 7e-31
 Identities = 67/146 (45%), Positives = 94/146 (64%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFSV 394
           +FTGIVEE GT+ ++        +TI AS     V+LGDSIAVNG CLTVT F  + F+V
Sbjct: 1   MFTGIVEETGTIQAIKKTGLSMALTIAASKVTSDVRLGDSIAVNGICLTVTGFSDNQFTV 60

Query: 395 GLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLWV 574
            + PET++ TSL  ++ G  VNLER++    R GGHFV GHVDGT  I  + K+ ++++ 
Sbjct: 61  DVMPETVKATSLNGLSKGSKVNLERAMSANGRFGGHFVSGHVDGTAEITRIEKKSNAVYY 120

Query: 575 KVRTSVDVLRYIVPKGYIAVDGTSLT 652
            ++ S ++ + +V KG I VDG S T
Sbjct: 121 DLKLSPELTKTLVLKGSITVDGVSST 146


>sp|O67604|RISA_AQUAE Riboflavin synthase alpha chain OS=Aquifex
           aeolicus GN=ribE PE=3 SV=1
          Length = 207

 Score =  123 bits (309), Expect = 7e-28
 Identities = 64/146 (43%), Positives = 95/146 (65%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFSV 394
           +FTG+VE++G V ++     G ++++     L+ VKLGDS++VNG CLTV     S+ + 
Sbjct: 1   MFTGLVEDLGKVKNLTLSSKGAKLSVETK--LEDVKLGDSVSVNGACLTVVDIKSSTLTF 58

Query: 395 GLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLWV 574
            ++PETL+RT+LG++  G YVNLER+L+   R+GGH VQGHVD T  + S N  G+   +
Sbjct: 59  DVSPETLKRTNLGKLKTGDYVNLERALRVGERLGGHIVQGHVDFTAPVKSFNFLGEHYEL 118

Query: 575 KVRTSVDVLRYIVPKGYIAVDGTSLT 652
            +    +   Y+V KG IA+DG SLT
Sbjct: 119 VIEIPEEWSIYVVEKGSIALDGISLT 144


>sp|P65327|RISA_MYCTU Riboflavin synthase alpha chain
           OS=Mycobacterium tuberculosis GN=ribE PE=3 SV=1
          Length = 201

 Score =  117 bits (292), Expect = 7e-26
 Identities = 68/147 (46%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTR-FDQSSFS 391
           +FTGIVEE G V     + D   +TI   +       GDSIAVNG CLTV        F+
Sbjct: 1   MFTGIVEERGEVTGREALVDAARLTIRGPMVTADAGHGDSIAVNGVCLTVVDVLPDGQFT 60

Query: 392 VGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLW 571
             +  ETL R++LGE+ PG  VNLER+    SR+GGH VQGHVD TG IV+         
Sbjct: 61  ADVMAETLNRSNLGELRPGSRVNLERAAALGSRLGGHIVQGHVDATGEIVARCPSEHWEV 120

Query: 572 VKVRTSVDVLRYIVPKGYIAVDGTSLT 652
           V++     V RY+V KG I VDG SLT
Sbjct: 121 VRIEMPASVARYVVEKGSITVDGISLT 147


>sp|P65328|RISA_MYCBO Riboflavin synthase alpha chain
           OS=Mycobacterium bovis GN=ribE PE=3 SV=1
          Length = 201

 Score =  117 bits (292), Expect = 7e-26
 Identities = 68/147 (46%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTR-FDQSSFS 391
           +FTGIVEE G V     + D   +TI   +       GDSIAVNG CLTV        F+
Sbjct: 1   MFTGIVEERGEVTGREALVDAARLTIRGPMVTADAGHGDSIAVNGVCLTVVDVLPDGQFT 60

Query: 392 VGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLW 571
             +  ETL R++LGE+ PG  VNLER+    SR+GGH VQGHVD TG IV+         
Sbjct: 61  ADVMAETLNRSNLGELRPGSRVNLERAAALGSRLGGHIVQGHVDATGEIVARCPSEHWEV 120

Query: 572 VKVRTSVDVLRYIVPKGYIAVDGTSLT 652
           V++     V RY+V KG I VDG SLT
Sbjct: 121 VRIEMPASVARYVVEKGSITVDGISLT 147


>sp|P51961|RISA_PHOPO Riboflavin synthase alpha chain
           OS=Photobacterium phosphoreum GN=ribE PE=3 SV=1
          Length = 218

 Score =  116 bits (291), Expect = 9e-26
 Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINA-SVALDGVKLGDSIAVNGTCLTVTRFDQSSFS 391
           +FTGI+E +G ++++      FE+++N  ++ L  VK+GDSIA NG CLTV +   +S+ 
Sbjct: 1   MFTGIIEAVGNISAITSKGSDFEVSVNCDTLDLADVKIGDSIATNGICLTVVKLTANSYV 60

Query: 392 VGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLW 571
             L+ ETL RT+      G  VNLE+++ PT+R GGH V GHVD    ++     G ++ 
Sbjct: 61  ADLSIETLSRTAFNYYKVGQAVNLEKAMLPTTRFGGHIVSGHVDAVAEVIECRTSGRAID 120

Query: 572 VKVRTSVDVLRYIVPKGYIAVDGTSLT 652
           + +R    + +Y+  KG + VDG SLT
Sbjct: 121 IWIRVPSQIEKYLSEKGSVTVDGVSLT 147



 Score = 30.4 bits (67), Expect = 8.5
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 332 SIAVNGTCLTVTRFDQSSFSVGLAPETLRRTSLGEVTPGFYVNLE 466
           S+ V+G  LTV     + F + + P T+  T++ +   G  VN+E
Sbjct: 138 SVTVDGVSLTVNAVTGNEFKLTIVPHTVVETTIADFKVGNKVNIE 182
tr_hit_id A9TW85
Definition tr|A9TW85|A9TW85_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 147
Score (bit) 214.0
E-value 5.0e-54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951311|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_B04, 5'
         (652 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TW85|A9TW85_PHYPA Predicted protein OS=Physcomitrella paten...   214   5e-54
tr|A7PJ30|A7PJ30_VITVI Chromosome chr12 scaffold_18, whole genom...   204   3e-51
tr|Q9SKU8|Q9SKU8_ARATH Putative riboflavin synthase alpha chain ...   201   3e-50
tr|Q8L9Q4|Q8L9Q4_ARATH Putative riboflavin synthase alpha chain ...   200   6e-50
tr|A9PD51|A9PD51_POPTR Putative uncharacterized protein OS=Popul...   194   4e-48
tr|B8G4N3|B8G4N3_9CHLR Riboflavin synthase, alpha subunit OS=Chl...   190   6e-47
tr|A5URX5|A5URX5_ROSS1 Riboflavin synthase, alpha subunit OS=Ros...   186   1e-45
tr|A3VP71|A3VP71_9PROT Riboflavin synthase subunit alpha OS=Parv...   174   6e-42
tr|B6TDF2|B6TDF2_MAIZE Riboflavin synthase alpha chain OS=Zea ma...   172   1e-41
tr|B8BMC0|B8BMC0_ORYSI Putative uncharacterized protein OS=Oryza...   171   5e-41
tr|A9PGH3|A9PGH3_POPTR Putative uncharacterized protein OS=Popul...   170   8e-41
tr|B6TU76|B6TU76_MAIZE Riboflavin synthase alpha chain OS=Zea ma...   169   2e-40
tr|Q2QP59|Q2QP59_ORYSJ Os12g0541000 protein OS=Oryza sativa subs...   167   4e-40
tr|B7FAH8|B7FAH8_ORYSJ cDNA, clone: J100073N23, full insert sequ...   167   4e-40
tr|A9WFQ9|A9WFQ9_CHLAA Riboflavin synthase, alpha subunit OS=Chl...   164   4e-39
tr|B2QH42|B2QH42_9CHLR Riboflavin synthase, alpha subunit OS=Chl...   164   4e-39
tr|A9B2A7|A9B2A7_HERA2 Riboflavin synthase, alpha subunit OS=Her...   159   1e-37
tr|A3DBL7|A3DBL7_CLOTH Riboflavin synthase, alpha subunit OS=Clo...   157   4e-37
tr|B4B9X8|B4B9X8_CLOTM Riboflavin synthase, alpha subunit OS=Clo...   157   4e-37
tr|Q1E1N8|Q1E1N8_COCIM Putative uncharacterized protein OS=Cocci...   157   7e-37
tr|B7G545|B7G545_PHATR Predicted protein OS=Phaeodactylum tricor...   155   2e-36
tr|A8U6A3|A8U6A3_9LACT Riboflavin synthase subunit alpha OS=Carn...   155   3e-36
tr|B2WEA5|B2WEA5_PYRTR Riboflavin synthase alpha chain OS=Pyreno...   155   3e-36
tr|A6QRQ5|A6QRQ5_AJECN Riboflavin synthase alpha chain OS=Ajello...   154   5e-36
tr|Q02ZL3|Q02ZL3_LACLS Riboflavin synthase alpha chain OS=Lactoc...   152   2e-35
tr|B7B0Q4|B7B0Q4_9FIRM Putative uncharacterized protein OS=Mitsu...   152   2e-35
tr|A2RLE0|A2RLE0_LACLM RibB protein OS=Lactococcus lactis subsp....   150   7e-35
tr|Q5WPU2|Q5WPU2_LACLC Riboflavin synthase alpha subunit OS=Lact...   150   7e-35
tr|A9VG49|A9VG49_BACWK Riboflavin synthase, alpha subunit OS=Bac...   150   9e-35
tr|B6Q3J1|B6Q3J1_PENMA Riboflavin synthase, alpha subunit OS=Pen...   149   1e-34

>tr|A9TW85|A9TW85_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_198905 PE=4 SV=1
          Length = 206

 Score =  214 bits (544), Expect = 5e-54
 Identities = 108/147 (73%), Positives = 125/147 (85%), Gaps = 1/147 (0%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDG-FEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFS 391
           +FTG+VEEMG V  V  +DDG F MTI ASV L+ V+LGDSIAVNGTCLTVT+FD SSFS
Sbjct: 1   MFTGLVEEMGNVKEVRVLDDGGFTMTIEASVVLENVRLGDSIAVNGTCLTVTQFDSSSFS 60

Query: 392 VGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLW 571
           VGLAPETLR+TSLGE + G  VNLERSL P++R+GGHFVQGHVDGTGTIVS   E DSLW
Sbjct: 61  VGLAPETLRKTSLGECSTGSPVNLERSLLPSTRLGGHFVQGHVDGTGTIVSFKPEKDSLW 120

Query: 572 VKVRTSVDVLRYIVPKGYIAVDGTSLT 652
           V V+T+ ++L++IVPKGYIAVDGTSLT
Sbjct: 121 VTVKTTPEILKFIVPKGYIAVDGTSLT 147



 Score = 38.5 bits (88), Expect = 0.36
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
 Frame = +2

Query: 140 TAFPVSRQQSCIVGRNIHGKAATRALFTGIVEEMGTVASVGPVDDGFEMTINASVA-LDG 316
           T  PV+ ++S +    + G         G V+  GT+ S  P  D   +T+  +   L  
Sbjct: 78  TGSPVNLERSLLPSTRLGGH-----FVQGHVDGTGTIVSFKPEKDSLWVTVKTTPEILKF 132

Query: 317 VKLGDSIAVNGTCLTVTRF--DQSSFSVGLAPETLRRTSLGEVTPGFYVNLE 466
           +     IAV+GT LTV     D+SSF+  L   T ++ S+ +   G  VNLE
Sbjct: 133 IVPKGYIAVDGTSLTVVDVLNDESSFTFMLVAYTQQKISIPQKKVGAKVNLE 184


>tr|A7PJ30|A7PJ30_VITVI Chromosome chr12 scaffold_18, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018574001
           PE=4 SV=1
          Length = 280

 Score =  204 bits (520), Expect = 3e-51
 Identities = 103/151 (68%), Positives = 125/151 (82%), Gaps = 3/151 (1%)
 Frame = +2

Query: 209 RALFTGIVEEMGTVASVGPVDDG-FEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQ-- 379
           R+LFTGIVEEMG V  +G  D G F+M I+A+  L+ V LGDSI++NGTCLTVT+FD   
Sbjct: 70  RSLFTGIVEEMGEVKQLGVADHGGFDMKIHATTVLEDVNLGDSISINGTCLTVTQFDTKL 129

Query: 380 SSFSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEG 559
           S F+VGL+PETLR+TSL E+ PG  VNLER+++P SRMGGHFVQGHVDGTG IVS   EG
Sbjct: 130 SEFTVGLSPETLRKTSLSELEPGSLVNLERAVRPVSRMGGHFVQGHVDGTGEIVSTEPEG 189

Query: 560 DSLWVKVRTSVDVLRYIVPKGYIAVDGTSLT 652
           DSLWVKV+T+ ++LR+IVPKG+IAVDGTSLT
Sbjct: 190 DSLWVKVKTTPELLRFIVPKGFIAVDGTSLT 220


>tr|Q9SKU8|Q9SKU8_ARATH Putative riboflavin synthase alpha chain
           (At2g20690/F5H14.34) OS=Arabidopsis thaliana
           GN=At2g20690 PE=2 SV=2
          Length = 271

 Score =  201 bits (511), Expect = 3e-50
 Identities = 106/170 (62%), Positives = 127/170 (74%), Gaps = 3/170 (1%)
 Frame = +2

Query: 152 VSRQQSCIVGRNIHGKA--ATRALFTGIVEEMGTVASVGPVDDG-FEMTINASVALDGVK 322
           +S + SC   R  H +   + R++FTGIVEEMG V  +G  D G F++ I A V L+ VK
Sbjct: 41  LSLKTSCGRSRTHHRRQNLSIRSVFTGIVEEMGEVKDLGMADHGGFDLKIGARVVLEDVK 100

Query: 323 LGDSIAVNGTCLTVTRFDQSSFSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGH 502
           LGDSIAVNGTCLTVT F+   F+VGLAPETLR+TSL E+  G  VNLER+LQP SRMGGH
Sbjct: 101 LGDSIAVNGTCLTVTEFNAEEFTVGLAPETLRKTSLEELKKGSPVNLERALQPVSRMGGH 160

Query: 503 FVQGHVDGTGTIVSLNKEGDSLWVKVRTSVDVLRYIVPKGYIAVDGTSLT 652
            VQGHVDGTG I S+  EGDSLWVKV+    +L+YIVPKG++AVDGTSLT
Sbjct: 161 VVQGHVDGTGVIESMEVEGDSLWVKVKADKGLLKYIVPKGFVAVDGTSLT 210


>tr|Q8L9Q4|Q8L9Q4_ARATH Putative riboflavin synthase alpha chain
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 270

 Score =  200 bits (509), Expect = 6e-50
 Identities = 106/170 (62%), Positives = 126/170 (74%), Gaps = 3/170 (1%)
 Frame = +2

Query: 152 VSRQQSCIVGRNIHGKA--ATRALFTGIVEEMGTVASVGPVDDG-FEMTINASVALDGVK 322
           +S + SC   R  H +   + R++FTGIVEEMG V  +G  D G F++ I A V L  VK
Sbjct: 40  LSLKTSCGRSRTHHRRQNLSIRSVFTGIVEEMGEVKDLGMADHGGFDLKIGAKVVLKDVK 99

Query: 323 LGDSIAVNGTCLTVTRFDQSSFSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGH 502
           LGDSIAVNGTCLTVT F+   F+VGLAPETLR+TSL E+  G  VNLER+LQP SRMGGH
Sbjct: 100 LGDSIAVNGTCLTVTEFNAEEFTVGLAPETLRKTSLEELKKGSPVNLERALQPVSRMGGH 159

Query: 503 FVQGHVDGTGTIVSLNKEGDSLWVKVRTSVDVLRYIVPKGYIAVDGTSLT 652
            VQGHVDGTG I S+  EGDSLWVKV+    +L+YIVPKG++AVDGTSLT
Sbjct: 160 VVQGHVDGTGVIESMEVEGDSLWVKVKADKGLLKYIVPKGFVAVDGTSLT 209


>tr|A9PD51|A9PD51_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  194 bits (493), Expect = 4e-48
 Identities = 99/149 (66%), Positives = 115/149 (77%), Gaps = 1/149 (0%)
 Frame = +2

Query: 209 RALFTGIVEEMGTVASVGPVDDG-FEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSS 385
           R+LFTGIVEEMG V  +G   DG  ++ I A   L+GV LGDSIAVNGTCLTVT F    
Sbjct: 73  RSLFTGIVEEMGKVQKLGDTKDGGVDLKIAAKTVLEGVNLGDSIAVNGTCLTVTDFTNQD 132

Query: 386 FSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDS 565
           F+VGL+PETLR+TSL E+  G  VNLER++QP SRMGGHFVQGHVDGTG IV    EGDS
Sbjct: 133 FTVGLSPETLRKTSLIELKTGSLVNLERAVQPISRMGGHFVQGHVDGTGVIVEKVPEGDS 192

Query: 566 LWVKVRTSVDVLRYIVPKGYIAVDGTSLT 652
           LW+KV+T   +L+YIVPKG+IAVDG SLT
Sbjct: 193 LWIKVKTEKGLLKYIVPKGFIAVDGASLT 221


>tr|B8G4N3|B8G4N3_9CHLR Riboflavin synthase, alpha subunit
           OS=Chloroflexus aggregans DSM 9485 GN=Cagg_2640 PE=4
           SV=1
          Length = 203

 Score =  190 bits (483), Expect = 6e-47
 Identities = 93/146 (63%), Positives = 114/146 (78%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFSV 394
           +FTGI+EE+GTV S+  +D G+ +T+ A+  L G + G SIAVNG CLTVT    S+F+V
Sbjct: 1   MFTGIIEEIGTVESLTEIDGGWSLTVQATTVLQGTEQGHSIAVNGACLTVTALTNSTFTV 60

Query: 395 GLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLWV 574
           GL+PETLRRT+LG++  G  VNLERSL    R+GGHFVQGHVDGTG I + + EGDSLWV
Sbjct: 61  GLSPETLRRTNLGDLRIGDGVNLERSLAVNGRIGGHFVQGHVDGTGVITAFHPEGDSLWV 120

Query: 575 KVRTSVDVLRYIVPKGYIAVDGTSLT 652
            V T+ D+LRYIVPKGYIAVDGTSLT
Sbjct: 121 TVATTPDLLRYIVPKGYIAVDGTSLT 146


>tr|A5URX5|A5URX5_ROSS1 Riboflavin synthase, alpha subunit
           OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_0969 PE=4
           SV=1
          Length = 203

 Score =  186 bits (472), Expect = 1e-45
 Identities = 89/146 (60%), Positives = 112/146 (76%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFSV 394
           +FTGIVEE+GTV ++  V  G+ +T+ A+  L+  +LGDS+A+NG CLTVT     SF+V
Sbjct: 1   MFTGIVEEIGTVETLAEVAGGWSLTVQATTVLEHTRLGDSLAINGACLTVTNLTDHSFTV 60

Query: 395 GLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLWV 574
           GL+PETLRRT+LG++ PG  VNLERSL    R+GGHFVQGH+DGTG + + + EGDSLWV
Sbjct: 61  GLSPETLRRTNLGDLKPGDGVNLERSLALNGRLGGHFVQGHIDGTGVVRAFHPEGDSLWV 120

Query: 575 KVRTSVDVLRYIVPKGYIAVDGTSLT 652
            V     +LRYIVPKGYIAVDGTSLT
Sbjct: 121 AVAAPAALLRYIVPKGYIAVDGTSLT 146


>tr|A3VP71|A3VP71_9PROT Riboflavin synthase subunit alpha
           OS=Parvularcula bermudensis HTCC2503 GN=PB2503_02692
           PE=4 SV=1
          Length = 197

 Score =  174 bits (440), Expect = 6e-42
 Identities = 85/146 (58%), Positives = 110/146 (75%)
 Frame = +2

Query: 215 LFTGIVEEMGTVASVGPVDDGFEMTINASVALDGVKLGDSIAVNGTCLTVTRFDQSSFSV 394
           +FTG++EEMGT+      + G  +TI A+  L+GV  GDSIAV G CL+VT F  S F+V
Sbjct: 1   MFTGLIEEMGTLLDRSMTEGGATLTIEAAKVLEGVAFGDSIAVEGVCLSVTSFTPSQFTV 60

Query: 395 GLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTGTIVSLNKEGDSLWV 574
           GLAPETL RT+LG ++ G  +NLERSL P SRMGGH+VQGHVDGTG I ++  +GD+L +
Sbjct: 61  GLAPETLSRTTLGALSFGAPLNLERSLTPVSRMGGHYVQGHVDGTGRIHTVKADGDALLI 120

Query: 575 KVRTSVDVLRYIVPKGYIAVDGTSLT 652
           ++    ++L+YIVPKGYIAVDGTSLT
Sbjct: 121 RIDCGPELLKYIVPKGYIAVDGTSLT 146



 Score = 33.9 bits (76), Expect = 8.9
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +2

Query: 335 IAVNGTCLTVTRFDQSSFSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQG 514
           IAV+GT LTV   D + F++ L   T    +LG+   G  VNLE  +    +    F+QG
Sbjct: 138 IAVDGTSLTVIDVDDAGFTLTLIAHTQPLVTLGKKREGDPVNLETDI--LGKYAEKFLQG 195


>tr|B6TDF2|B6TDF2_MAIZE Riboflavin synthase alpha chain OS=Zea mays
           PE=2 SV=1
          Length = 298

 Score =  172 bits (437), Expect = 1e-41
 Identities = 91/160 (56%), Positives = 112/160 (70%), Gaps = 12/160 (7%)
 Frame = +2

Query: 209 RALFTGIVEEMGTVASVGPVDD----------GFEMTINASVALDGVKLGDSIAVNGTCL 358
           R+LFTGIVEE+G V  +GP             G ++ +     L G +LGDS+AV+G CL
Sbjct: 78  RSLFTGIVEEVGRVRRLGPPLAPSGGGGGEALGLDLEVETKDLLAGTQLGDSVAVDGACL 137

Query: 359 TVTRFDQ--SSFSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTG 532
           TV   D   S+ + G+APETLRRTSLGE  PG  VNLER+L P+SRMGGHFVQGHVDGTG
Sbjct: 138 TVAAIDPAASTLTFGVAPETLRRTSLGERAPGDGVNLERALTPSSRMGGHFVQGHVDGTG 197

Query: 533 TIVSLNKEGDSLWVKVRTSVDVLRYIVPKGYIAVDGTSLT 652
            IV+   +GDSLWV VR   ++LR +VPKG++AVDGTSLT
Sbjct: 198 EIVAFRPDGDSLWVTVRAPPEILRLLVPKGFVAVDGTSLT 237


>tr|B8BMC0|B8BMC0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_38616 PE=4 SV=1
          Length = 304

 Score =  171 bits (432), Expect = 5e-41
 Identities = 89/160 (55%), Positives = 110/160 (68%), Gaps = 12/160 (7%)
 Frame = +2

Query: 209 RALFTGIVEEMGTVASVGPVD----------DGFEMTINASVALDGVKLGDSIAVNGTCL 358
           R+LFTGIVE++GTV  +GP             G ++ +  S  L G +LGDS+AV+G CL
Sbjct: 81  RSLFTGIVEDVGTVRRIGPPPAPPSGGGGEAPGVDLEVETSTLLAGTQLGDSVAVDGACL 140

Query: 359 TVTRFDQ--SSFSVGLAPETLRRTSLGEVTPGFYVNLERSLQPTSRMGGHFVQGHVDGTG 532
           TV   D   S+ + G+APETLRRTSLG  + G  VNLER+L P SRMGGHFVQGHVDGTG
Sbjct: 141 TVAAIDAAASTLTFGVAPETLRRTSLGGRSAGDAVNLERALTPASRMGGHFVQGHVDGTG 200

Query: 533 TIVSLNKEGDSLWVKVRTSVDVLRYIVPKGYIAVDGTSLT 652
            I +   EGDSLWV VR   ++LR +VPKG++AVDG SLT
Sbjct: 201 EIAAFRAEGDSLWVTVRAPPEILRLLVPKGFVAVDGASLT 240