DK951314
Clone id TST38A01NGRL0011_B07
Library
Length 686
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_B07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
ATGAAGCCCGCCATAGCTATCAACTTTGGTCTTCATCTCTAGCCTATCTTCCACTTTTCC
TCTTCCCTTCACAGAGAGATCGTGGGCCGTGGTGCTTTTCGTTTGTCAGACTGTTCAACC
TCAGACATTGCATTGCTTGCCACCCCAGAAAATCGCTTCTCTCCTCCTCACGTCCTCATT
GTACAGGTGAAGCTTCTCAGTTAATCGTTTTTAGCCCTTCATTTGTCTGAGCTTCCGTTA
CGTAGCCATGGCATTTCCTTCTTCTACTATCTCGGGCTCTCTCTATGGAAGCTCCCCCGA
ATCCATTAGAGGCTTCTGGTCAGATCTCCATGAAAAGCCAGGTTCTCGCAAGAACGTCCA
TGGCTTTCACAATACTTCCACTCATAACGTCAACCCTAACACTAACCCAGACTCAGCTGC
TCCTTTTACTTCTCCTCCCCCGACATTCATCTCTTCTGATGAATGGTGGAGGAAGCCCTC
TGACAAGTCGACTTCGCAACCTTCTGCAATCATATGGCCGAGTTCAGGGCCCTCAAATCT
CACAGGTGACAAGCTCTTTGACTTCCATGAAAGCTCGAATCAAGCTCCCAAAGAGAAGGA
ATATGTGTACATCGACACACCAACAAGTAGAGGGACAGATGGAGGAGTTCCTGTGTATGT
TATGCTTCCGTTGGACACTGTTAGCT
■■Homology search results ■■ -
sp_hit_id Q8KFL5
Definition sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepidum
Align length 41
Score (bit) 37.0
E-value 0.099
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951314|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_B07, 5'
(686 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepi... 37 0.099
sp|P42660|VCP_AEDAE Vitellogenic carboxypeptidase OS=Aedes aegyp... 33 1.1
sp|O60503|ADCY9_HUMAN Adenylate cyclase type 9 OS=Homo sapiens G... 30 9.2

>sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepidum
GN=ileS PE=3 SV=1
Length = 1084

Score = 37.0 bits (84), Expect = 0.099
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3

Query: 534 EGPELGHMIAEGCEVDLSEGFLHHSSEEMNVGGGEVKGAAE 412
+GP+ G + A G +L EGF+ EEMN+G KG E
Sbjct: 481 DGPDSGKLFAVGSVAELREGFIEIDGEEMNLGDALDKGLVE 521


>sp|P42660|VCP_AEDAE Vitellogenic carboxypeptidase OS=Aedes aegypti
GN=VCP PE=1 SV=3
Length = 471

Score = 33.5 bits (75), Expect = 1.1
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
Frame = +2

Query: 464 WWRKPSDKSTSQPSAIIWPSSGP--SNLTG--DKLFDFHESSNQAPKEKEY--------V 607
+W P+ + Q ++W GP S+L G ++ FH N++ K++EY +
Sbjct: 93 FWYVPAKNNREQAPILVWLQGGPGASSLFGMFEENGPFHIHRNKSVKQREYSWHQNHHMI 152

Query: 608 YIDTPTSRG 634
YID P G
Sbjct: 153 YIDNPVGTG 161


>sp|O60503|ADCY9_HUMAN Adenylate cyclase type 9 OS=Homo sapiens
GN=ADCY9 PE=1 SV=4
Length = 1353

Score = 30.4 bits (67), Expect = 9.2
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2

Query: 521 SSGPSNLTGDKLFDFHESSNQAPKEKEYVYIDTPTSRGTDGGVP 652
SSG SN K+ SSN PK +Y + +S G GGVP
Sbjct: 21 SSGDSNSVRVKINPKQLSSNSHPKHCKYSISSSCSSSGDSGGVP 64


tr_hit_id A9THN6
Definition tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens subsp. patens
Align length 50
Score (bit) 52.4
E-value 3.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951314|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_B07, 5'
(686 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens sub... 52 3e-05
tr|A9SR20|A9SR20_PHYPA Beta-amylase OS=Physcomitrella patens sub... 44 0.010
tr|A9RQY6|A9RQY6_PHYPA Beta-amylase OS=Physcomitrella patens sub... 42 0.037
tr|B3QQB5|B3QQB5_CHLP8 Isoleucyl-tRNA synthetase OS=Chlorobaculu... 34 7.7
tr|A7PCH3|A7PCH3_VITVI Chromosome chr2 scaffold_11, whole genome... 34 7.7
tr|A5AGI9|A5AGI9_VITVI Putative uncharacterized protein OS=Vitis... 34 7.7

>tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_222395 PE=3 SV=1
Length = 507

Score = 52.4 bits (124), Expect = 3e-05
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Frame = +2

Query: 548 DKLFDFHES----SNQAPKEKEYVYIDTPTSRGTDGGVPVYVMLPLDTVS 685
D +F H+S N A + KE+ + +TPTSRG GGVPV+VMLPLD+V+
Sbjct: 2 DTMFPEHKSLLDWDNTADEWKEHAFHETPTSRGVHGGVPVFVMLPLDSVN 51


>tr|A9SR20|A9SR20_PHYPA Beta-amylase OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_187470 PE=3 SV=1
Length = 505

Score = 43.9 bits (102), Expect = 0.010
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2

Query: 578 NQAPKEKEYVYIDTPTSRGTDGGVPVYVMLPLDTVS 685
N + K KE+ + +T TSRG G VPV+VMLPLD+V+
Sbjct: 13 NTSDKWKEHAFHETATSRGVHGRVPVFVMLPLDSVN 48


>tr|A9RQY6|A9RQY6_PHYPA Beta-amylase OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_118142 PE=3 SV=1
Length = 483

Score = 42.0 bits (97), Expect = 0.037
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2

Query: 614 DTPTSRGTDGGVPVYVMLPLDTVS 685
+T TSRG GGVPV+VMLPLDTVS
Sbjct: 3 ETATSRGVRGGVPVFVMLPLDTVS 26


>tr|B3QQB5|B3QQB5_CHLP8 Isoleucyl-tRNA synthetase OS=Chlorobaculum
parvum (strain NCIB 8327) GN=Cpar_1726 PE=4 SV=1
Length = 1080

Score = 34.3 bits (77), Expect = 7.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3

Query: 534 EGPELGHMIAEGCEVDLSEGFLHHSSEEMNVGGGEVKGAAE 412
+GP+ G + A G +L EGF+ ++MN+G KG E
Sbjct: 481 DGPDSGKLFAVGSVAELREGFIDIDGQQMNLGDALDKGLVE 521


>tr|A7PCH3|A7PCH3_VITVI Chromosome chr2 scaffold_11, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00015861001
PE=3 SV=1
Length = 247

Score = 34.3 bits (77), Expect = 7.7
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2

Query: 566 HESSNQAPKEKEYVYIDTPTSRGTDGG-VPVYVMLPLDTVS 685
HE++ + K V PT +G VPV+VMLPLDTVS
Sbjct: 53 HENAMVSEGRKNQVLHGLPTPHNKNGSRVPVFVMLPLDTVS 93


>tr|A5AGI9|A5AGI9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032500 PE=3 SV=1
Length = 543

Score = 34.3 bits (77), Expect = 7.7
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2

Query: 566 HESSNQAPKEKEYVYIDTPTSRGTDGG-VPVYVMLPLDTVS 685
HE++ + K V PT +G VPV+VMLPLDTVS
Sbjct: 53 HENAMVSEGRKNQVLHGLPTPHNKNGSRVPVFVMLPLDTVS 93