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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951320
Clone id TST38A01NGRL0011_B13
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_B13. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GATGAATCGGATCAGGCGCTGTGCTGAGCCCGCTGAGGGAGCCATGGCCGAGCGCGGAGA
GATAAGGTGGTGCGTACCCCCTTTGCGAGTGATGGTGCCCCCCGGAGTGCCAGAGCCTCG
CTTGACGCCCTCCTTCCTCGCCAACTGTGCTGCAGGACAACCTTTTCAAGTTGTGTGTAG
CTCTCTGCCCCATGATGGTGACTCTCCCTGTGTGCAGCAAGCATCTGTTTCCGTGATGGC
GGGCAAGGAGGCGGTTGCAAAAGGGCGCCTGCGAGAGAAGAGCTCGGCAATCAGAGACTA
CCCTGAGGGATGTCGGCCGGCTTGCAAATTATGATCGGCGGGCTCGAGCAATAGGCATCA
ATAACAGAGCCATTACACATGGTGCTTATAATGTGTTCTTGTGGGCAAGAACCATGGCAG
AGAGTCTTATTACGGTCAGCACATATTGTGCTCATGCGGCTCATTCATGTTTGGGGTTCG
TACGATCCGGACACATGATATCAAGAACACTGTACACCATTCTCTTTAAACCTGGTATAG
TTTGGTTTCAAGACTCAGAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q2M3C7
Definition sp|Q2M3C7|SPKAP_HUMAN A-kinase anchor protein SPHKAP OS=Homo sapiens
Align length 88
Score (bit) 33.9
E-value 0.53
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951320|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_B13, 5'
         (543 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2M3C7|SPKAP_HUMAN A-kinase anchor protein SPHKAP OS=Homo sap...    34   0.53 
sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 O...    33   1.2  
sp|Q07113|MPRI_MOUSE Cation-independent mannose-6-phosphate rece...    33   1.2  
sp|Q2H317|NBP35_CHAGB Cytosolic Fe-S cluster assembling factor N...    32   1.5  
sp|A5UYI4|RL11_ROSS1 50S ribosomal protein L11 OS=Roseiflexus sp...    32   2.6  
sp|P08169|MPRI_BOVIN Cation-independent mannose-6-phosphate rece...    32   2.6  
sp|Q0VDD7|CS057_HUMAN Uncharacterized protein C19orf57 OS=Homo s...    32   2.6  
sp|Q6C3D7|STE20_YARLI Serine/threonine-protein kinase STE20 OS=Y...    30   5.8  
sp|A7NRZ8|RL11_ROSCS 50S ribosomal protein L11 OS=Roseiflexus ca...    30   5.8  
sp|Q2TL32|UBR4_RAT E3 ubiquitin-protein ligase UBR4 OS=Rattus no...    30   7.6  
sp|A2AN08|UBR4_MOUSE E3 ubiquitin-protein ligase UBR4 OS=Mus mus...    30   7.6  
sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sa...    30   7.6  
sp|P11717|MPRI_HUMAN Cation-independent mannose-6-phosphate rece...    30   7.6  
sp|Q9NWZ8|GEMI8_HUMAN Gem-associated protein 8 OS=Homo sapiens G...    30   9.9  
sp|Q1ACL5|CHLB_CHAVU Light-independent protochlorophyllide reduc...    30   9.9  

>sp|Q2M3C7|SPKAP_HUMAN A-kinase anchor protein SPHKAP OS=Homo
           sapiens GN=SPHKAP PE=1 SV=1
          Length = 1700

 Score = 33.9 bits (76), Expect = 0.53
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 23/88 (26%)
 Frame = +2

Query: 68  LRVMVPPGVPEPRLTP--------------SFLANCAAGQPFQVVCSSLPHDGDSPCVQQ 205
           L+   P G+ EP +                S +A C  G+  +V CS  P  G  P   +
Sbjct: 536 LQTQAPQGLKEPSINEYSFPSALCGMTQVASAVAVCGLGEREEVTCSVAP-SGSLPPAAE 594

Query: 206 AS---------VSVMAGKEAVAKGRLRE 262
           AS          S+  GKEA+AKG L+E
Sbjct: 595 ASEAMPPLCGLASMELGKEAIAKGLLKE 622


>sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31
           OS=Homo sapiens GN=USP31 PE=1 SV=2
          Length = 1352

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 17  AEGAMAERGEIRWCVP--PLRVMVPPGVPEPRLTPSFLANCAAGQPFQVVCSSLPHDGDS 190
           +EGA  +RG +R C P  P     PP  P P  +P+  A CAA +P   V     H   +
Sbjct: 80  SEGAAPDRGGLRSCFPPGPAAAPTPPPCPPPPASPAPPA-CAA-EPVPGVAGLRNH--GN 135

Query: 191 PCVQQASVSVMAGKEAVAK 247
            C   A++  ++  E  A+
Sbjct: 136 TCFMNATLQCLSNTELFAE 154


>sp|Q07113|MPRI_MOUSE Cation-independent mannose-6-phosphate receptor
            OS=Mus musculus GN=Igf2r PE=1 SV=1
          Length = 2483

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 158  VCSSL-PHDGDSPCVQQASVSVMAGKEAVAKGRLRE 262
            VC SL PH G  PC  +A+V ++ G + V  G++R+
Sbjct: 1400 VCKSLSPHAGTEPCPPEAAVCLLNGSKPVNLGKVRD 1435


>sp|Q2H317|NBP35_CHAGB Cytosolic Fe-S cluster assembling factor
           NBP35 OS=Chaetomium globosum GN=NBP35 PE=3 SV=1
          Length = 342

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
 Frame = +2

Query: 11  EPAEGAMAERGEIRWCVPPLRVMVPPGVPEPRLTPSFLANCAAGQPFQVVCSSLPH--DG 184
           EP E  +A   + +   P L    P   P P    +  A+  AG P Q +C+S P   D 
Sbjct: 9   EPVEDVLANPLKQK---PQLVAPEPEHCPGPESEQAGTADSCAGCPNQAICASAPKGPDP 65

Query: 185 DSPCVQ------QASVSVMAGKEAVAKGRL-REKSSAIRDYPE 292
           D P +       +  + V++GK  V K  L  + + A+   PE
Sbjct: 66  DLPAITARLAGVKHKILVLSGKGGVGKSTLTAQLAQALATNPE 108


>sp|A5UYI4|RL11_ROSS1 50S ribosomal protein L11 OS=Roseiflexus sp.
           (strain RS-1) GN=rplK PE=3 SV=1
          Length = 141

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = -1

Query: 171 RELHTT*KGCPAAQLARK-EGVKRGSGTP----GGTITRK 67
           R    T K  PAA L RK  G+++GSGTP     GTIT+K
Sbjct: 64  RSFTITLKTPPAADLLRKVAGIEKGSGTPNRKIAGTITKK 103


>sp|P08169|MPRI_BOVIN Cation-independent mannose-6-phosphate receptor
            OS=Bos taurus GN=IGF2R PE=1 SV=2
          Length = 2499

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 158  VCSSL-PHDGDSPCVQQASVSVMAGKEAVAKGRLRE 262
            VC SL P  G  PC  +A+V ++ G + V  GR+R+
Sbjct: 1416 VCKSLSPQAGSDPCPPEAAVCLLGGPKPVNLGRVRD 1451


>sp|Q0VDD7|CS057_HUMAN Uncharacterized protein C19orf57 OS=Homo
           sapiens GN=C19orf57 PE=1 SV=2
          Length = 668

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 14  PAEGAMAERGEIRWCVPPLRVMVPPGVPEPRLTPSFLANCAAGQPFQVVCSSL 172
           P  G     G   WC+ P    V  G P+P+ TPS +     G    + CSSL
Sbjct: 284 PTSGPAPGLGPASWCLEP--GSVAQGSPDPQQTPSRMGREGEGTHSSLGCSSL 334


>sp|Q6C3D7|STE20_YARLI Serine/threonine-protein kinase STE20
           OS=Yarrowia lipolytica GN=STE20 PE=3 SV=1
          Length = 1125

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -1

Query: 96  GTPGGTITRKGGTHHLISPRSAMAPSAGSAQR 1
           GTPGGT    GG  H+ SP     PSA S  R
Sbjct: 258 GTPGGTPMSPGGVAHVTSPGG--GPSAASVHR 287


>sp|A7NRZ8|RL11_ROSCS 50S ribosomal protein L11 OS=Roseiflexus
           castenholzii (strain DSM 13941 / HLO8) GN=rplK PE=3 SV=1
          Length = 141

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -1

Query: 171 RELHTT*KGCPAAQLARKE-GVKRGSGTP----GGTITRK 67
           R    T K  PAA L RK  G+++GSGTP     GTIT K
Sbjct: 64  RSFTITLKTPPAADLLRKAAGIEKGSGTPNRKIAGTITAK 103


>sp|Q2TL32|UBR4_RAT E3 ubiquitin-protein ligase UBR4 OS=Rattus
            norvegicus GN=Ubr4 PE=2 SV=2
          Length = 5194

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 361  HMVLIMCSCGQEPWQRVLLRSAHIVLMRLIHVWGSYDPDT 480
            H+  +  + G+E W+   L++A+     L+ VWG + P++
Sbjct: 4902 HLAAVRLARGREEWESAALQNANTKCNGLLPVWGPHVPES 4941
tr_hit_id Q2SY44
Definition tr|Q2SY44|Q2SY44_BURTA Glutamine amidotransferase, class I OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)
Align length 102
Score (bit) 34.7
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951320|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_B13, 5'
         (543 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2SY44|Q2SY44_BURTA Glutamine amidotransferase, class I OS=Bu...    35   3.4  
tr|A8HY25|A8HY25_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   7.6  
tr|Q4E564|Q4E564_TRYCR Putative uncharacterized protein OS=Trypa...    33   9.7  
tr|A1R384|A1R384_ARTAT Putative RNA methyltransferase, TrmH fami...    33   9.9  

>tr|Q2SY44|Q2SY44_BURTA Glutamine amidotransferase, class I
           OS=Burkholderia thailandensis (strain E264 / ATCC 700388
           / DSM 13276 / CIP 106301) GN=BTH_I1617 PE=4 SV=1
          Length = 444

 Score = 34.7 bits (78), Expect = 3.4
 Identities = 29/102 (28%), Positives = 42/102 (41%)
 Frame = -1

Query: 315 NLQAGRHPSG*SLIAELFSRRRPFATASLPAITETDACCTQGESPSWGRELHTT*KGCPA 136
           N  A     G S  A   +   P A ASLP++++          P  G  +H    G  A
Sbjct: 4   NTSARTDQPGSSSSASAATPSGPAAPASLPSVSD---------KPPAGATVHV---GAFA 51

Query: 135 AQLARKEGVKRGSGTPGGTITRKGGTHHLISPRSAMAPSAGS 10
           AQ+A  + +      P GTI   G      +P +AM  +AG+
Sbjct: 52  AQIAAAQDIGDPGSAPTGTIAEPGAPGVAAAPAAAMPGAAGA 93


>tr|A8HY25|A8HY25_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
            GN=CHLREDRAFT_167400 PE=4 SV=1
          Length = 1328

 Score = 33.5 bits (75), Expect = 7.6
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
 Frame = +1

Query: 70   ASDGAPRSARASLDALLPRQ-----LCCRTTFSSCV*LSAP*W*LSLCAASICFRDGGQG 234
            AS   P +A A   AL+PR      L    T +     +AP   L+  AA++C   GG+G
Sbjct: 778  ASPPHPSAAPAPAPALMPRVSAPPVLLPTGTGAGAPAAAAPPS-LAAAAAALCSSPGGRG 836

Query: 235  GGCKRAPAREELGNQRLP*GMSAGLQIMIGGL 330
            GG   +PA    G++      +AGL  + GGL
Sbjct: 837  GGVAPSPASLTAGSRG---SRTAGLSAVRGGL 865


>tr|Q4E564|Q4E564_TRYCR Putative uncharacterized protein
           OS=Trypanosoma cruzi GN=Tc00.1047053510359.50 PE=4 SV=1
          Length = 526

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
 Frame = +2

Query: 14  PAEGAMAERGEIRWCVPPLRVMVPPGVPEPRLTPSFLANCAAGQPFQVVCSSLPHDGDSP 193
           P+EG      E  +   PLRV  P G   P L  + +  C+  +      S+   + DS 
Sbjct: 135 PSEGEAFAPSEPVFIHRPLRV--PDGFSWPTLAATVVQWCSVRKDDYTALSTAVSNVDSE 192

Query: 194 CVQQ-ASVSVMAGKEAVAKGRLRE-KSSAIRDYP 289
           C+ + A+  V AG +A   G+  E  +SA R++P
Sbjct: 193 CLHEAANEGVDAGNDADGSGKTGEPDASAAREHP 226


>tr|A1R384|A1R384_ARTAT Putative RNA methyltransferase, TrmH family,
           group 3 OS=Arthrobacter aurescens (strain TC1)
           GN=AAur_0902 PE=3 SV=1
          Length = 330

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -1

Query: 195 QGESPSWGRELHTT*KGCPAAQLARKEGVKRGSGT-PGGTITRKG----GTHHLISPRSA 31
           +G+ P+   E  T  K     QLA +   KRGSGT PGG   R G     T  L++ R++
Sbjct: 28  EGKGPTPKAEERTYHKAYKNKQLAERSAAKRGSGTRPGGAGARSGPKGRATEELVTGRNS 87

Query: 30  M 28
           +
Sbjct: 88  V 88