| DK951337 |
| Clone id |
TST38A01NGRL0011_C07 |
| Library |
TST38 |
| Length |
699 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_C07. 5' end sequence. |
| Accession |
DK951337 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL261Contig1 |
| Sequence |
CGAGTTCTGTGCAGTAACGACCGGGCTACTAAGAGAACAGAAAAGCAGGGCACATGCATG CCTCTGTGTGTGTGCCCTTCTGCGCAGCTTCGGGTAAAGCAAGTGTAGCAGGGTGTGAAT GATGGCAGGTGTTGCTGAAGAGGAGGTTTGCCAGATAGAGTCCTTACAAGTGGAGGAGTA TCCTTTTGGCTCTGGCTGGTTCTTTCCTCGTGAGCAGATTGAGCAGCGATCCTTGTCTAG AAGGGATGGTATAAGCCTAGCGAAGGAGAACCAGCTCCGCAAGTCTTATTGTGTCTTTCT GCAAGACCTTGGCATGCGCCTGAAAGTGCCTCAATTGACAATTGCGACGTCAATCGTGTT TTGCCATCGGTTCTATCTTCGGCAGTCACATGCAAAGAATGACCGCTATACGATTGCAAC AGCTTGCATGTTCCTGGCTGGGAAGGTGGAGGAGACTCCAAAATTACTGCAGAATGTCCT CTCTCTTTCCTATGATATAAGACACAAAAGAGACAAAGTAGCTGCGGAGCGAATTAAACA GAAGGAGGTCTATGAGCACGAGAAGGAGCAAGTTTTGCTAGCAGAAAATGTAGTCCTTCA AACTTTGGGTTTTGAGCTCAATGTCATCCATCCGTACAAGCGTTTGGTAGCAGCTGTTAA GAAGCTNCAAGTTACAGAGAAATCTTTGGCTCAAGTTGC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q2RAC5 |
| Definition |
sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica |
| Align length |
170 |
| Score (bit) |
248.0 |
| E-value |
2.0e-65 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B8BJ73 |
| Definition |
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
| Align length |
170 |
| Score (bit) |
248.0 |
| E-value |
2.0e-64 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951337|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_C07, 5' (699 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza... 248 2e-64 tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequen... 246 8e-64 tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medic... 239 9e-62 tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whol... 238 4e-61 tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medic... 235 2e-60 tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza... 234 5e-60 tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza... 233 9e-60 tr|A9SI06|A9SI06_PHYPA Predicted protein OS=Physcomitrella paten... 228 2e-58 tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 227 6e-58 tr|A9SUB1|A9SUB1_PHYPA Predicted protein OS=Physcomitrella paten... 226 8e-58 tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whol... 221 5e-56 tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomit... 211 5e-53 tr|A9SUA9|A9SUA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 203 1e-50 tr|B6SH69|B6SH69_MAIZE Cyclin-dependent protein kinase OS=Zea ma... 178 3e-43 tr|B8AH65|B8AH65_ORYSI Putative uncharacterized protein OS=Oryza... 177 4e-43 tr|B7F0D1|B7F0D1_ORYSJ cDNA clone:002-129-H05, full insert seque... 177 4e-43 tr|A7NT76|A7NT76_VITVI Chromosome chr18 scaffold_1, whole genome... 177 6e-43 tr|A3A6C4|A3A6C4_ORYSJ Putative uncharacterized protein OS=Oryza... 168 3e-40 tr|Q6EEW1|Q6EEW1_MEDTR Cyclin T1 OS=Medicago truncatula PE=2 SV=1 151 4e-35 tr|A7NWJ7|A7NWJ7_VITVI Chromosome chr5 scaffold_2, whole genome ... 151 4e-35 tr|A5ASI0|A5ASI0_VITVI Putative uncharacterized protein OS=Vitis... 150 8e-35 tr|B6UF70|B6UF70_MAIZE Putative uncharacterized protein OS=Zea m... 145 3e-33 tr|Q01EB0|Q01EB0_OSTTA CycK CycK-related cyclin family protein (... 132 3e-29 tr|B8AH26|B8AH26_ORYSI Putative uncharacterized protein OS=Oryza... 132 3e-29 tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc... 131 5e-29 tr|Q3V0G4|Q3V0G4_MOUSE Cyclin T1 (Fragment) OS=Mus musculus GN=C... 127 7e-28 tr|Q866N0|Q866N0_TUPCH Cyclin T1 OS=Tupaia chinensis PE=2 SV=1 124 6e-27 tr|Q8MK43|Q8MK43_CAPHI Cyclin T1 OS=Capra hircus GN=CCNT1 PE=3 SV=1 123 1e-26 tr|Q8MJC2|Q8MJC2_CAPHI Cyclin T1 protein OS=Capra hircus GN=CCNT... 123 1e-26 tr|A4RSP3|A4RSP3_OSTLU CycK-related cyclin family protein OS=Ost... 122 2e-26
>tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35185 PE=4 SV=1 Length = 490
Score = 248 bits (634), Expect = 2e-64 Identities = 120/170 (70%), Positives = 144/170 (84%) Frame = +2
Query: 188 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 367 G+ W+F R++IE+ SLSRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 34 GASWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 93
Query: 368 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 547 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKE Sbjct: 94 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKE 153
Query: 548 VYEHEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 VYE +KE +LL E VVL TLGF+LNV HPYK LV A+KK +V + +LAQV Sbjct: 154 VYEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQV 203
>tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 543
Score = 246 bits (629), Expect = 8e-64 Identities = 119/170 (70%), Positives = 144/170 (84%) Frame = +2
Query: 188 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 367 G+ W+F R++IE+ S SRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 33 GASWYFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 92
Query: 368 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 547 RFYLRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKE Sbjct: 93 RFYLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAGQRIKQKE 152
Query: 548 VYEHEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 VY+ +KE +LLAE VVL TLGF+LNV HPYK LV A++K +V + +LAQV Sbjct: 153 VYDQQKELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQNALAQV 202
>tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 239 bits (611), Expect = 9e-62 Identities = 116/170 (68%), Positives = 141/170 (82%) Frame = +2
Query: 188 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 367 GS W+F R++IE+ S S+ DGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCH Sbjct: 30 GSRWYFSRKEIEENSPSQEDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCH 89
Query: 368 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 547 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I +K+D A +RIKQKE Sbjct: 90 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAVQRIKQKE 149
Query: 548 VYEHEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 VYE +KE +LLAE VVL TLGF+ NV HPYK LV A+KK +V + +LAQV Sbjct: 150 VYEQQKELILLAERVVLATLGFDFNVHHPYKPLVEAIKKFKVAQNALAQV 199
>tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035737001 PE=3 SV=1 Length = 523
Score = 238 bits (606), Expect = 4e-61 Identities = 115/170 (67%), Positives = 140/170 (82%) Frame = +2
Query: 188 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 367 G W+ R++IE+ S S+RDGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCH Sbjct: 30 GGRWYLSRKEIEENSPSKRDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCH 89
Query: 368 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 547 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I +K+D A +RIKQKE Sbjct: 90 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIINKKDPAAVQRIKQKE 149
Query: 548 VYEHEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 VYE +KE +LL E VVL TLGF+LNV HPYK LV A+KK +V + +LAQV Sbjct: 150 VYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQV 199
>tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 395
Score = 235 bits (600), Expect = 2e-60 Identities = 113/167 (67%), Positives = 138/167 (82%) Frame = +2
Query: 197 WFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHRFY 376 W+ R++IE+ + SR+DGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCHRF+ Sbjct: 34 WYMSRKEIEENAPSRKDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF 93
Query: 377 LRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYE 556 LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY++ HK+D AA+RIKQKEVYE Sbjct: 94 LRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEMIHKKDPAAAQRIKQKEVYE 153
Query: 557 HEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 +KE +LL E VVL TL F+LNV HPYK LV A+KK V + +LAQV Sbjct: 154 QQKELILLGERVVLATLAFDLNVQHPYKPLVEAIKKFNVAKNALAQV 200
>tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031709 PE=3 SV=1 Length = 495
Score = 234 bits (596), Expect = 5e-60 Identities = 117/175 (66%), Positives = 141/175 (80%), Gaps = 5/175 (2%) Frame = +2
Query: 188 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 367 G+ W+F R++IE+ SLSRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 34 GASWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 93
Query: 368 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 547 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQK Sbjct: 94 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKS 153
Query: 548 -----VYEHEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 V +KE +LL E VVL TLGF+LNV HPYK LV A+KK +V + +LAQV Sbjct: 154 LDYFGVEWQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQV 208
>tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034708 PE=3 SV=1 Length = 683
Score = 233 bits (594), Expect = 9e-60 Identities = 119/198 (60%), Positives = 145/198 (73%), Gaps = 28/198 (14%) Frame = +2
Query: 188 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 367 G+ W+F R++IE+ S SRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 33 GASWYFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 92
Query: 368 RFYLRQSHAKNDR----------------------------YTIATACMFLAGKVEETPK 463 RFYLRQSHAKNDR +TIAT CMFLAGKVEETP+ Sbjct: 93 RFYLRQSHAKNDRRCQKLRAITRKRNEYKFLLPMERDSIVVHTIATVCMFLAGKVEETPR 152
Query: 464 LLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIHPYKR 643 L++V+ +SY+I HK+D A +RIKQKEVY+ +KE +LLAE VVL TLGF+LNV HPYK Sbjct: 153 PLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHHPYKP 212
Query: 644 LVAAVKKLQVTEKSLAQV 697 LV A++K +V + +LAQV Sbjct: 213 LVEAIRKFKVAQNALAQV 230
>tr|A9SI06|A9SI06_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_130165 PE=3 SV=1 Length = 210
Score = 228 bits (582), Expect = 2e-58 Identities = 109/169 (64%), Positives = 138/169 (81%) Frame = +2
Query: 191 SGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHR 370 + W+F R++IE++S SR DGI + KE RKSYC FLQDLGMRLKVPQ+TIAT+IVFCHR Sbjct: 34 ANWYFSRDEIEKQSPSRLDGIDIKKETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHR 93
Query: 371 FYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEV 550 F+ RQSH KNDR+ +AT CMFLAGKVEETP+ L+ V+ SY+IR K+D +AA+RI+QK+V Sbjct: 94 FFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRFKKDPIAAQRIRQKDV 153
Query: 551 YEHEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 YE +KE VL E ++L TLGF+LNV HPYK LVAA+KK +V + +LAQV Sbjct: 154 YEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFKVAQNTLAQV 202
>tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42949 PE=3 SV=1 Length = 406
Score = 227 bits (578), Expect = 6e-58 Identities = 108/169 (63%), Positives = 137/169 (81%) Frame = +2
Query: 191 SGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHR 370 + W+F R++IE++S SR DGI + KE RKSYC FLQDLGMRLKVPQ+TIAT+IVFCHR Sbjct: 1 ANWYFSRDEIEKQSPSRLDGIDIKKETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHR 60
Query: 371 FYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEV 550 F+ RQSH KNDR+ +AT CMFLAGKVEETP+ L+ V+ SY+IR K+D +A +RI+QK+V Sbjct: 61 FFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRFKKDPIAVQRIRQKDV 120
Query: 551 YEHEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 YE +KE VL E ++L TLGF+LNV HPYK LVAA+KK +V + +LAQV Sbjct: 121 YEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFKVAQNTLAQV 169
>tr|A9SUB1|A9SUB1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_135418 PE=3 SV=1 Length = 210
Score = 226 bits (577), Expect = 8e-58 Identities = 108/169 (63%), Positives = 136/169 (80%) Frame = +2
Query: 191 SGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHR 370 + W+F R++IE +S SR DGI + KE RKSYC FLQDLGMRLKVPQ+TIAT+IVFCHR Sbjct: 34 ANWYFTRDEIENQSPSRLDGIDIKKETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHR 93
Query: 371 FYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEV 550 F+ RQSH KNDR+ +AT CMFLAGKVEETP+ L+ V+ SY+IR K+D VA ++I+QK+V Sbjct: 94 FFHRQSHKKNDRHMVATVCMFLAGKVEETPRPLREVIMFSYEIRFKKDPVAVQKIRQKDV 153
Query: 551 YEHEKEQVLLAENVVLQTLGFELNVIHPYKRLVAAVKKLQVTEKSLAQV 697 YE +KE VL E ++L TLGF+LNV HPYK LVAA+KK +V + +LAQV Sbjct: 154 YEEQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFKVAQNTLAQV 202
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