DK951362 |
Clone id |
TST38A01NGRL0011_D10 |
Library |
TST38 |
Length |
672 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_D10. 5' end sequence. |
Accession |
DK951362 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3564Contig1 |
Sequence |
GAGAGAAGTTTCGATCTGCGGATATTCCTCGGGAGAGAGAGAAAGGGGCTATGGAGGGCT TGCTAGTGTCACGTTCTGTCGTGGGTGGCGCGGTGGGGGGAAAGGGTTGCTGCCAGGCCT CTTGGAGCCCTATCAACCAGAAATCTCATAATTCTGGCTTCAGTCCATTCTTCACCTTTG GAAACCTTTCAAACACAAGCTCTTCCATGAGCTCTAGTATGCCCGCTCTGGATTCCTGCC AATCATTCGGCAATCTGCATGAATCAATCGGGCATCAAGAGGTGACAGCATTGGTGCATG TGCAGAGAGATGCGGACTTGCCATGTGCTGGTCAATTCAGTACCTTGTCACAGGATATGG CCATGGGCTTAATTCTTCAGGCAGCTTCGGGAACGGGGTGGACGACAGGTTCTGGTTTGG AGGGCCCTTCGAATTTATTTGGATTAAAGGGAGAGCAGTCACTGGAGGAAACCACTGAAC AACCCTGGCCATTGCTGAGCAAATCCCCACGTAGGCGCATGAGGGTGGCATTCACATGTA ATGTATGTGGTGAGCGCACGACTCGTGCCATCAATCCACATGCTTACACAGACGGTACCG TTTTTGTGCAGTGCGCTGGGTGCAACATCTTCCATAAGCTGGTGGACAACTTAAAGCTCT TCCATGAGTTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P42844 |
Definition |
sp|P42844|ZIM17_YEAST Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae |
Align length |
56 |
Score (bit) |
55.8 |
E-value |
2.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NVP9 |
Definition |
tr|A7NVP9|A7NVP9_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
110 |
Score (bit) |
152.0 |
E-value |
2.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951362|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_D10, 5' (672 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NVP9|A7NVP9_VITVI Chromosome chr18 scaffold_1, whole genome... 152 2e-35 tr|A9NKU3|A9NKU3_PICSI Putative uncharacterized protein OS=Picea... 148 3e-34 tr|O04646|O04646_ARATH A_TM021B04.14 protein (Putative uncharact... 146 1e-33 tr|Q5Z992|Q5Z992_ORYSJ Putative uncharacterized protein P0548E04... 145 3e-33 tr|Q0D9E7|Q0D9E7_ORYSJ Os06g0724400 protein (Fragment) OS=Oryza ... 145 3e-33 tr|B4FC04|B4FC04_MAIZE Putative uncharacterized protein OS=Zea m... 145 3e-33 tr|A2YH37|A2YH37_ORYSI Putative uncharacterized protein OS=Oryza... 145 3e-33 tr|Q8LD12|Q8LD12_ARATH Putative uncharacterized protein OS=Arabi... 144 4e-33 tr|A3BFI2|A3BFI2_ORYSJ Putative uncharacterized protein OS=Oryza... 144 7e-33 tr|A9S1G7|A9S1G7_PHYPA Predicted protein OS=Physcomitrella paten... 139 1e-31 tr|B6TGI7|B6TGI7_MAIZE DNL zinc finger family protein OS=Zea may... 136 1e-30 tr|Q9S7X9|Q9S7X9_ARATH Putative transcription factor; 86360-8716... 79 3e-13 tr|Q6KF34|Q6KF34_MAIZE ETCHED1 protein OS=Zea mays GN=et1 PE=2 SV=1 78 4e-13 tr|B6TQN6|B6TQN6_MAIZE Zinc ribbon 1 OS=Zea mays PE=2 SV=1 78 4e-13 tr|Q6KF33|Q6KF33_MAIZE Zinc ribbon 1 OS=Zea mays GN=zr1 PE=2 SV=1 78 6e-13 tr|A9P1I6|A9P1I6_PICSI Putative uncharacterized protein OS=Picea... 77 8e-13 tr|Q5ZDA0|Q5ZDA0_ORYSJ Putative zinc ribbon 1 (Putative uncharac... 77 1e-12 tr|Q0JLE7|Q0JLE7_ORYSJ Os01g0605200 protein OS=Oryza sativa subs... 77 1e-12 tr|B8ABI4|B8ABI4_ORYSI Putative uncharacterized protein OS=Oryza... 77 1e-12 tr|A9TGZ2|A9TGZ2_PHYPA Predicted protein OS=Physcomitrella paten... 72 2e-11 tr|A7P2Z5|A7P2Z5_VITVI Chromosome chr1 scaffold_5, whole genome ... 72 3e-11 tr|A4S8C7|A4S8C7_OSTLU Predicted protein OS=Ostreococcus lucimar... 64 9e-09 tr|Q00U85|Q00U85_OSTTA ETCHED1 protein (ISS) OS=Ostreococcus tau... 62 2e-08 tr|B4MEP9|B4MEP9_DROVI GJ14731 OS=Drosophila virilis GN=GJ14731 ... 58 6e-07 tr|B4JND8|B4JND8_DROGR GH24157 OS=Drosophila grimshawi GN=GH2415... 58 6e-07 tr|B4L2D6|B4L2D6_DROMO GI14660 OS=Drosophila mojavensis GN=GI146... 57 8e-07 tr|A7LNI8|A7LNI8_CHLRE HSP70 escort protein (Hsp70 escorting pro... 57 1e-06 tr|Q75AU3|Q75AU3_ASHGO ADL173Cp OS=Ashbya gossypii GN=ADL173C PE... 56 2e-06 tr|B5VQB0|B5VQB0_YEAS6 YNL310Cp-like protein OS=Saccharomyces ce... 56 2e-06 tr|B3LPE4|B3LPE4_YEAS1 Putative uncharacterized protein OS=Sacch... 56 2e-06
>tr|A7NVP9|A7NVP9_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015520001 PE=4 SV=1 Length = 209
Score = 152 bits (383), Expect = 2e-35 Identities = 72/110 (65%), Positives = 81/110 (73%) Frame = +3
Query: 342 TLSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLSKSPRRRM 521 TLS+D AMGL+L AA +EGPS + S E + PW L +KSPRRRM Sbjct: 64 TLSKDAAMGLVLSAASVRGWTTDSGMEGPSVPAAAEARSSTERISTFPWSLFTKSPRRRM 123
Query: 522 RVAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 RVAFTCNVCG+RTTRAINPHAYTDGTVFVQC GCN+FHKLVDNL LFHE+ Sbjct: 124 RVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNLFHEM 173
>tr|A9NKU3|A9NKU3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 214
Score = 148 bits (373), Expect = 3e-34 Identities = 70/109 (64%), Positives = 83/109 (76%) Frame = +3
Query: 345 LSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLSKSPRRRMR 524 LS+++AMGL+L+AA +EGP+ G K + E + PW L +KSPRRRMR Sbjct: 76 LSKEVAMGLVLKAAGGRGWTTGSGMEGPAVSAGPKENTEMAEKSIYPWSLFTKSPRRRMR 135
Query: 525 VAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 VAFTC VCG+RTTRAINPHAYTDGTVFVQCAGC++FHKLVDNL LFHEL Sbjct: 136 VAFTCGVCGQRTTRAINPHAYTDGTVFVQCAGCDVFHKLVDNLNLFHEL 184
>tr|O04646|O04646_ARATH A_TM021B04.14 protein (Putative uncharacterized protein At5g27280) OS=Arabidopsis thaliana GN=A_TM021B04.14 PE=2 SV=1 Length = 212
Score = 146 bits (369), Expect = 1e-33 Identities = 71/110 (64%), Positives = 80/110 (72%) Frame = +3
Query: 342 TLSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLSKSPRRRM 521 TLS D AMGL+L AA +EGPS L + + + PW L +KSPRRRM Sbjct: 66 TLSNDEAMGLVLSAASVKGWTTGSGMEGPS----LPAKTDTDTVSTFPWSLFTKSPRRRM 121
Query: 522 RVAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 RVAFTCNVCG+RTTRAINPHAYTDGTVFVQC GCN+FHKLVDNL LFHE+ Sbjct: 122 RVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNLFHEV 171
>tr|Q5Z992|Q5Z992_ORYSJ Putative uncharacterized protein P0548E04.2 (Putative uncharacterized protein P0535F09.35) OS=Oryza sativa subsp. japonica GN=P0548E04.2 PE=4 SV=1 Length = 205
Score = 145 bits (365), Expect = 3e-33 Identities = 72/111 (64%), Positives = 82/111 (73%) Frame = +3
Query: 339 STLSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLSKSPRRR 518 S LS+D AMGL++ AA +EGP G G++ E + PW L +KSPRRR Sbjct: 66 SPLSKDAAMGLVVSAATGRGWTTGSGMEGPPKAAG-GGDRP--EVSTLPWSLFTKSPRRR 122
Query: 519 MRVAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 MRVAFTCNVCG+RTTRAINPHAYTDGTVFVQC GCNIFHKLVDNL LFHE+ Sbjct: 123 MRVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNIFHKLVDNLNLFHEM 173
>tr|Q0D9E7|Q0D9E7_ORYSJ Os06g0724400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0724400 PE=4 SV=1 Length = 224
Score = 145 bits (365), Expect = 3e-33 Identities = 72/111 (64%), Positives = 82/111 (73%) Frame = +3
Query: 339 STLSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLSKSPRRR 518 S LS+D AMGL++ AA +EGP G G++ E + PW L +KSPRRR Sbjct: 85 SPLSKDAAMGLVVSAATGRGWTTGSGMEGPPKAAG-GGDRP--EVSTLPWSLFTKSPRRR 141
Query: 519 MRVAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 MRVAFTCNVCG+RTTRAINPHAYTDGTVFVQC GCNIFHKLVDNL LFHE+ Sbjct: 142 MRVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNIFHKLVDNLNLFHEM 192
>tr|B4FC04|B4FC04_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 211
Score = 145 bits (365), Expect = 3e-33 Identities = 71/117 (60%), Positives = 80/117 (68%) Frame = +3
Query: 321 PCAGQFSTLSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLS 500 P S LS+D AMGL++ AA +EGP G E + PW L + Sbjct: 65 PYGLSISPLSKDAAMGLVVSAATGSGWTTGSGMEGPPTA-SKAGGAGRPEVSTLPWSLFT 123
Query: 501 KSPRRRMRVAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 KSPRRRMRVAFTCNVCG+RTTRAINPHAYTDGTVFVQC GCN+FHKLVDNL LFHE+ Sbjct: 124 KSPRRRMRVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNLFHEM 180
>tr|A2YH37|A2YH37_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24501 PE=4 SV=1 Length = 205
Score = 145 bits (365), Expect = 3e-33 Identities = 72/111 (64%), Positives = 82/111 (73%) Frame = +3
Query: 339 STLSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLSKSPRRR 518 S LS+D AMGL++ AA +EGP G G++ E + PW L +KSPRRR Sbjct: 66 SPLSKDAAMGLVVSAATGRGWTTGSGMEGPPKAAG-GGDRP--EVSTLPWSLFTKSPRRR 122
Query: 519 MRVAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 MRVAFTCNVCG+RTTRAINPHAYTDGTVFVQC GCNIFHKLVDNL LFHE+ Sbjct: 123 MRVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNIFHKLVDNLNLFHEM 173
>tr|Q8LD12|Q8LD12_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 212
Score = 144 bits (364), Expect = 4e-33 Identities = 70/109 (64%), Positives = 79/109 (72%) Frame = +3
Query: 345 LSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLSKSPRRRMR 524 LS D AMGL+L AA +EGPS L + + + PW L +KSPRRRMR Sbjct: 67 LSNDEAMGLVLSAASVKGWTTGSGMEGPS----LPAKTDTDTVSTFPWSLFTKSPRRRMR 122
Query: 525 VAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 VAFTCNVCG+RTTRAINPHAYTDGTVFVQC GCN+FHKLVDNL LFHE+ Sbjct: 123 VAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNLFHEV 171
>tr|A3BFI2|A3BFI2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021804 PE=4 SV=1 Length = 205
Score = 144 bits (362), Expect = 7e-33 Identities = 71/109 (65%), Positives = 81/109 (74%) Frame = +3
Query: 345 LSQDMAMGLILQAAXXXXXXXXXXLEGPSNLFGLKGEQSLEETTEQPWPLLSKSPRRRMR 524 LS+D AMGL++ AA +EGP G G++ E + PW L +KSPRRRMR Sbjct: 68 LSKDAAMGLVVSAATGRGWTTGSGMEGPPKAAG-GGDRP--EVSTLPWSLFTKSPRRRMR 124
Query: 525 VAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 VAFTCNVCG+RTTRAINPHAYTDGTVFVQC GCNIFHKLVDNL LFHE+ Sbjct: 125 VAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNIFHKLVDNLNLFHEM 173
>tr|A9S1G7|A9S1G7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162324 PE=4 SV=1 Length = 283
Score = 139 bits (351), Expect = 1e-31 Identities = 72/117 (61%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Frame = +3
Query: 324 CAGQFSTLSQDMAMGLILQAAXXXXXXXXXX-LEGPSNLFGLKGEQSLEETTEQPWPLLS 500 C G+F+ + D AMG+IL AA LEGPS E E P P+ S Sbjct: 151 CTGRFACSNHDEAMGIILNAAGSTAGWTTGSGLEGPSYPME-------EAANEMPGPIFS 203
Query: 501 KSPRRRMRVAFTCNVCGERTTRAINPHAYTDGTVFVQCAGCNIFHKLVDNLKLFHEL 671 KSPRRRMRVAFTCNVCG R+ RAINPHAYTDGTVFVQC GC++FHKLVDNLKLFHEL Sbjct: 204 KSPRRRMRVAFTCNVCGHRSIRAINPHAYTDGTVFVQCEGCDVFHKLVDNLKLFHEL 260
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