DK951368 |
Clone id |
TST38A01NGRL0011_D16 |
Library |
TST38 |
Length |
669 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_D16. 5' end sequence. |
Accession |
DK951368 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2599Contig1 |
Sequence |
GATCATGCAAGGGATTCTGATAGAGAGAAGGAGCGAGAACGACACGTGGAAAGAGGACGA GGCAGAGAAGGGCGGGAAAGGTCACCTGATGATGAGAGGGTCAAAGAACGACGCTCACCT AGATCTCATTCTGCTCCGAGTCCACCAAAGAAGCGGGGTCGTGCTTCATCTCCTTCATCA CCACCCAGAACGTCTACAACCTCGATGCGGGACGAGGCAACAAATCAGGAGGAGGAATAT CAGCTGGAGGGCTCTGATGATGCTCTGGCCAAAATGAGAGCTGCTGAAGCTGATCTTGAA GAGAAGCAGAAAAACAAGGAGAAGCCATCATTTGAGTACTCTGGGAAACTGGCAGCTGAA ACAAATAAAGTTCGCGGTGTTACTTTACTCTTCACAGAACCTCCAGAAGCAAGAAAGCCG ACAGTGCGATGGCGTTTGTACATCTTTAAAGATGGAGAACCTTTCAATGAGCCATTGTAT ATCCATCGACAAACTTGCTATCTTTTTGGGAGAGAAAGAAGAGTCGCTGATGTTCCAACT GACCATCCTTCTTGCAGCAAGCAGCATGCTGTTATTCAATACAGATCTATAGAAAAAGAG GGGGAGAGTTCAAGTAAAAGTGAAGTCAGGCCATATCTCATGGATCTTGGGAGCACAAAT GGCACCTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8TAD8 |
Definition |
sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens |
Align length |
141 |
Score (bit) |
140.0 |
E-value |
8.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FBW8 |
Definition |
tr|B4FBW8|B4FBW8_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
154 |
Score (bit) |
197.0 |
E-value |
7.0e-49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951368|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_D16, 5' (669 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FBW8|B4FBW8_MAIZE Putative uncharacterized protein OS=Zea m... 197 7e-49 tr|Q8W4D8|Q8W4D8_ARATH Putative uncharacterized protein At3g2056... 195 2e-48 tr|Q9LJU3|Q9LJU3_ARATH Arabidopsis thaliana genomic DNA, chromos... 185 3e-45 tr|Q0DG95|Q0DG95_ORYSJ Os05g0545600 protein OS=Oryza sativa subs... 184 3e-45 tr|A3B6G1|A3B6G1_ORYSJ Putative uncharacterized protein OS=Oryza... 184 3e-45 tr|Q6PBD3|Q6PBD3_XENTR Smad nuclear interacting protein 1 (OTTXE... 149 2e-34 tr|B6PUN2|B6PUN2_BRAFL Putative uncharacterized protein OS=Branc... 145 2e-33 tr|Q16HM9|Q16HM9_AEDAE Putative uncharacterized protein OS=Aedes... 143 1e-32 tr|B6P5D8|B6P5D8_BRAFL Putative uncharacterized protein (Fragmen... 143 1e-32 tr|B0XL99|B0XL99_CULQU Smad nuclear-interacting protein 1 OS=Cul... 143 1e-32 tr|Q6DE04|Q6DE04_XENLA MGC81042 protein OS=Xenopus laevis GN=sni... 141 3e-32 tr|Q16FZ3|Q16FZ3_AEDAE Putative uncharacterized protein OS=Aedes... 141 3e-32 tr|B0WUI6|B0WUI6_CULQU Putative uncharacterized protein OS=Culex... 141 3e-32 tr|B4DDK7|B4DDK7_HUMAN cDNA FLJ51792, highly similar to Smad nuc... 140 9e-32 tr|B1AK66|B1AK66_HUMAN Smad nuclear interacting protein 1 OS=Hom... 140 9e-32 tr|Q5M9G6|Q5M9G6_RAT Smad nuclear interacting protein 1 OS=Rattu... 138 3e-31 tr|B1ASC5|B1ASC5_MOUSE Smad nuclear interacting protein 1 OS=Mus... 138 3e-31 tr|Q6DDL6|Q6DDL6_XENLA MGC83354 protein OS=Xenopus laevis GN=MGC... 137 5e-31 tr|P91125|P91125_CAEEL Putative uncharacterized protein OS=Caeno... 137 6e-31 tr|A8QAZ9|A8QAZ9_BRUMA FHA domain containing protein OS=Brugia m... 137 6e-31 tr|A9QQ79|A9QQ79_LYCSI Smad nuclear interacting protein 1 (Fragm... 137 8e-31 tr|A7SDH1|A7SDH1_NEMVE Predicted protein (Fragment) OS=Nematoste... 136 1e-30 tr|Q4V8W8|Q4V8W8_DANRE Smad nuclear interacting protein OS=Danio... 135 2e-30 tr|B4M7Z8|B4M7Z8_DROVI GJ16691 OS=Drosophila virilis GN=GJ16691 ... 135 2e-30 tr|B3RUM0|B3RUM0_TRIAD Putative uncharacterized protein (Fragmen... 135 2e-30 tr|A8XEB4|A8XEB4_CAEBR Putative uncharacterized protein OS=Caeno... 135 2e-30 tr|B4DLV6|B4DLV6_HUMAN cDNA FLJ57163, moderately similar to Smad... 135 2e-30 tr|B3MYH9|B3MYH9_DROAN GF22145 OS=Drosophila ananassae GN=GF2214... 135 3e-30 tr|A8NRQ0|A8NRQ0_COPC7 Putative uncharacterized protein OS=Copri... 134 5e-30 tr|B4NUW3|B4NUW3_DROSI GD15469 OS=Drosophila simulans GN=GD15469... 132 2e-29
>tr|B4FBW8|B4FBW8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 217
Score = 197 bits (500), Expect = 7e-49 Identities = 97/154 (62%), Positives = 113/154 (73%), Gaps = 1/154 (0%) Frame = +1
Query: 211 DEATNQEEEYQLEGSDDALAKMRAAEADLEEKQKNKEKPSFEYSGKLAAETNKVRGVTLL 390 ++ ++ E G DALA M A LE K+K +KPSFE SGKLA ETN+V GV LL Sbjct: 28 EDINSRGGEASRNGDPDALATMNATAEALEAKEK--QKPSFELSGKLAEETNRVAGVNLL 85
Query: 391 FTEPPEARKPTVRWRLYIFKDGEPFNEPLYIHRQTCYLFGRERRVADVPTDHPSCSKQHA 570 ++EPPEARK +RWRLY+FKDGEP NEPLY+HR TCYLFGRER+VADVPTDHPSCSKQHA Sbjct: 86 YSEPPEARKSEIRWRLYVFKDGEPLNEPLYVHRMTCYLFGRERKVADVPTDHPSCSKQHA 145
Query: 571 VIQYRSI-XXXXXXXXXXXVRPYLMDLGSTNGTF 669 V+QYR + +RPYLMDL STNGTF Sbjct: 146 VLQYRLVEKEQLDGMMTKKIRPYLMDLDSTNGTF 179
>tr|Q8W4D8|Q8W4D8_ARATH Putative uncharacterized protein At3g20560; K10D20.9 (Putative uncharacterized protein At3g20560) OS=Arabidopsis thaliana GN=At3g20560/K10D20.9 PE=2 SV=1 Length = 314
Score = 195 bits (496), Expect = 2e-48 Identities = 99/157 (63%), Positives = 119/157 (75%), Gaps = 4/157 (2%) Frame = +1
Query: 211 DEATNQE---EEYQLEGSDDALAKMRAAEADLEEKQKNKEKPSFEYSGKLAAETNKVRGV 381 DE +N EE +E +D++A+MRA E L K+K E+PSFE SGKLA ETN+ RG+ Sbjct: 124 DEGSNARGGSEEPNVE--EDSVARMRAVEEALAAKKK--EEPSFELSGKLAEETNRYRGI 179
Query: 382 TLLFTEPPEARKPTVRWRLYIFKDGEPFNEPLYIHRQTCYLFGRERRVADVPTDHPSCSK 561 TLLF EPPEARKP+ RWRLY+FKDGEP NEPL +HRQ+CYLFGRERR+AD+PTDHPSCSK Sbjct: 180 TLLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCSK 239
Query: 562 QHAVIQYRSI-XXXXXXXXXXXVRPYLMDLGSTNGTF 669 QHAVIQYR + V+PY+MDLGSTN T+ Sbjct: 240 QHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTY 276
>tr|Q9LJU3|Q9LJU3_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K10D20 OS=Arabidopsis thaliana PE=4 SV=1 Length = 490
Score = 185 bits (469), Expect = 3e-45 Identities = 99/173 (57%), Positives = 119/173 (68%), Gaps = 20/173 (11%) Frame = +1
Query: 211 DEATNQE---EEYQLEGSDDALAKMRAAEADLEEKQKNKEKPSFEYSGKLAAETNKVRGV 381 DE +N EE +E +D++A+MRA E L K+K E+PSFE SGKLA ETN+ RG+ Sbjct: 292 DEGSNARGGSEEPNVE--EDSVARMRAVEEALAAKKK--EEPSFELSGKLAEETNRYRGI 347
Query: 382 TLLFTEPPEARKPTVRWRLYIFKDGEPFN----------------EPLYIHRQTCYLFGR 513 TLLF EPPEARKP+ RWRLY+FKDGEP N EPL +HRQ+CYLFGR Sbjct: 348 TLLFNEPPEARKPSERWRLYVFKDGEPLNVFLMYVSVHVKCVGLTEPLCLHRQSCYLFGR 407
Query: 514 ERRVADVPTDHPSCSKQHAVIQYRSI-XXXXXXXXXXXVRPYLMDLGSTNGTF 669 ERR+AD+PTDHPSCSKQHAVIQYR + V+PY+MDLGSTN T+ Sbjct: 408 ERRIADIPTDHPSCSKQHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTY 460
>tr|Q0DG95|Q0DG95_ORYSJ Os05g0545600 protein OS=Oryza sativa subsp. japonica GN=Os05g0545600 PE=4 SV=1 Length = 804
Score = 184 bits (468), Expect = 3e-45 Identities = 91/138 (65%), Positives = 104/138 (75%), Gaps = 1/138 (0%) Frame = +1
Query: 259 DALAKMRAAEADLEEKQKNKEKPSFEYSGKLAAETNKVRGVTLLFTEPPEARKPTVRWRL 438 D+L KM A LE K+K +KPSFE SGKLA ETN+V GV LL +EPPEARK +RWRL Sbjct: 522 DSLVKMNATAEALEAKEK--QKPSFELSGKLAEETNRVAGVNLLHSEPPEARKSDIRWRL 579
Query: 439 YIFKDGEPFNEPLYIHRQTCYLFGRERRVADVPTDHPSCSKQHAVIQYRSI-XXXXXXXX 615 Y+FK GEP EPLY+HR + YLFGRER+VAD+PTDHPSCSKQHAV+QYR + Sbjct: 580 YVFKGGEPLEEPLYVHRMSSYLFGRERKVADIPTDHPSCSKQHAVLQYRLVEKEQPDGMM 639
Query: 616 XXXVRPYLMDLGSTNGTF 669 VRPYLMDLGSTNGTF Sbjct: 640 SKQVRPYLMDLGSTNGTF 657
>tr|A3B6G1|A3B6G1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018633 PE=4 SV=1 Length = 651
Score = 184 bits (468), Expect = 3e-45 Identities = 91/138 (65%), Positives = 104/138 (75%), Gaps = 1/138 (0%) Frame = +1
Query: 259 DALAKMRAAEADLEEKQKNKEKPSFEYSGKLAAETNKVRGVTLLFTEPPEARKPTVRWRL 438 D+L KM A LE K+K +KPSFE SGKLA ETN+V GV LL +EPPEARK +RWRL Sbjct: 369 DSLVKMNATAEALEAKEK--QKPSFELSGKLAEETNRVAGVNLLHSEPPEARKSDIRWRL 426
Query: 439 YIFKDGEPFNEPLYIHRQTCYLFGRERRVADVPTDHPSCSKQHAVIQYRSI-XXXXXXXX 615 Y+FK GEP EPLY+HR + YLFGRER+VAD+PTDHPSCSKQHAV+QYR + Sbjct: 427 YVFKGGEPLEEPLYVHRMSSYLFGRERKVADIPTDHPSCSKQHAVLQYRLVEKEQPDGMM 486
Query: 616 XXXVRPYLMDLGSTNGTF 669 VRPYLMDLGSTNGTF Sbjct: 487 SKQVRPYLMDLGSTNGTF 504
>tr|Q6PBD3|Q6PBD3_XENTR Smad nuclear interacting protein 1 (OTTXETP00000004900) OS=Xenopus tropicalis GN=snip1 PE=2 SV=1 Length = 370
Score = 149 bits (375), Expect = 2e-34 Identities = 79/155 (50%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Frame = +1
Query: 208 RDEATNQEEEYQLEGSDDALAKMRAAEADLEEKQKNKEKPSFEYSGKLAAETNKVRGVTL 387 R + +Q EE Q E DD+ K A NKEKP+FE SG L +TN RGV + Sbjct: 167 RRQQNDQAEEEQTEDVDDSTDKGDA----------NKEKPNFELSGALLEDTNTFRGVVI 216
Query: 388 LFTEPPEARKPTVRWRLYIFKDGEPFNEPLYIHRQTCYLFGRERRVADVPTDHPSCSKQH 567 ++EPPEAR P RWRLY FK+ E +YIHRQ+ YL GR+RR+AD+P DHPSCSKQH Sbjct: 217 KYSEPPEARTPKKRWRLYPFKNDEAL-PVMYIHRQSAYLLGRQRRIADIPIDHPSCSKQH 275
Query: 568 AVIQYRSI-XXXXXXXXXXXVRPYLMDLGSTNGTF 669 AV+QYR + VRPY++DLGS NGT+ Sbjct: 276 AVLQYRMVQFTRANGTSGRRVRPYIIDLGSGNGTY 310
>tr|B6PUN2|B6PUN2_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_111161 PE=4 SV=1 Length = 336
Score = 145 bits (366), Expect = 2e-33 Identities = 74/149 (49%), Positives = 98/149 (65%), Gaps = 1/149 (0%) Frame = +1
Query: 226 QEEEYQLEGSDDALAKMRAAEADLEEKQKNKEKPSFEYSGKLAAETNKVRGVTLLFTEPP 405 + E+ Q + + + AE + E++ +K++P+FE SG L ETNK RGV + + EPP Sbjct: 137 RREDRQRKPENPFQGEEGGAEGEGGEEEADKDQPNFELSGALTEETNKFRGVVIKYREPP 196
Query: 406 EARKPTVRWRLYIFKDGEPFNEPLYIHRQTCYLFGRERRVADVPTDHPSCSKQHAVIQYR 585 EARKP RWRLY FK GE +PL+IHRQ+ YL GRER VAD+P DHPSCSKQHA +QYR Sbjct: 197 EARKPRKRWRLYPFK-GEEALKPLHIHRQSAYLLGRERLVADIPIDHPSCSKQHAALQYR 255
Query: 586 SI-XXXXXXXXXXXVRPYLMDLGSTNGTF 669 + V+PY++DL S NGT+ Sbjct: 256 LVDYEKPDGTTGRRVKPYIIDLESANGTY 284
>tr|Q16HM9|Q16HM9_AEDAE Putative uncharacterized protein OS=Aedes aegypti GN=AAEL013977 PE=4 SV=1 Length = 221
Score = 143 bits (360), Expect = 1e-32 Identities = 74/141 (52%), Positives = 91/141 (64%), Gaps = 2/141 (1%) Frame = +1
Query: 253 SDDALAKMRAAEADLEEK-QKNKEKPSFEYSGKLAAETNKVRGVTLLFTEPPEARKPTVR 429 ++ A RA D E+K + KEKP+F SGKL E NKV GV + + EPPE+RKP R Sbjct: 11 TNSGTAGSRAGSHDSEDKGPEEKEKPNFALSGKLTEEANKVNGVVIKYAEPPESRKPKRR 70
Query: 430 WRLYIFKDGEPFNEPLYIHRQTCYLFGRERRVADVPTDHPSCSKQHAVIQYRSI-XXXXX 606 WRLY FK G +YIHRQ+CYL GR+R+V D+P DHPSCSKQHA +QYR + Sbjct: 71 WRLYPFK-GYQALPTMYIHRQSCYLIGRDRKVCDLPIDHPSCSKQHAALQYRLVPYERED 129
Query: 607 XXXXXXVRPYLMDLGSTNGTF 669 VRPY++DL S NGTF Sbjct: 130 GTAGKRVRPYIIDLESANGTF 150
>tr|B6P5D8|B6P5D8_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_243118 PE=4 SV=1 Length = 179
Score = 143 bits (360), Expect = 1e-32 Identities = 70/124 (56%), Positives = 88/124 (70%), Gaps = 1/124 (0%) Frame = +1
Query: 301 EKQKNKEKPSFEYSGKLAAETNKVRGVTLLFTEPPEARKPTVRWRLYIFKDGEPFNEPLY 480 E++ +K++P+FE SG L ETNK RGV + + EPPEARKP RWRLY FK GE +PL+ Sbjct: 5 EEEADKDQPNFELSGALTEETNKFRGVVIKYREPPEARKPRKRWRLYPFK-GEEALKPLH 63
Query: 481 IHRQTCYLFGRERRVADVPTDHPSCSKQHAVIQYRSI-XXXXXXXXXXXVRPYLMDLGST 657 IHRQ+ YL GRER VAD+P DHPSCSKQHA +QYR + V+PY++DL S Sbjct: 64 IHRQSAYLLGRERLVADIPIDHPSCSKQHAALQYRLVDYEKPDGTTGRRVKPYIIDLESA 123
Query: 658 NGTF 669 NGT+ Sbjct: 124 NGTY 127
>tr|B0XL99|B0XL99_CULQU Smad nuclear-interacting protein 1 OS=Culex quinquefasciatus GN=CpipJ_CPIJ020123 PE=4 SV=1 Length = 217
Score = 143 bits (360), Expect = 1e-32 Identities = 72/127 (56%), Positives = 85/127 (66%), Gaps = 1/127 (0%) Frame = +1
Query: 292 DLEEKQKNKEKPSFEYSGKLAAETNKVRGVTLLFTEPPEARKPTVRWRLYIFKDGEPFNE 471 D EE+ KEKP+F SGKL E NKV GV + + EP E+RKP RWRLY FK GE Sbjct: 20 DKEEEPVEKEKPNFALSGKLTEEVNKVNGVVIKYAEPAESRKPKRRWRLYPFK-GEQALP 78
Query: 472 PLYIHRQTCYLFGRERRVADVPTDHPSCSKQHAVIQYRSI-XXXXXXXXXXXVRPYLMDL 648 LYIHRQ+CYL GR+R+V D+P DHPSCSKQHA +QYR + VRPY++DL Sbjct: 79 TLYIHRQSCYLIGRDRKVCDLPIDHPSCSKQHAALQYRLVPYEREDGTSGKRVRPYIIDL 138
Query: 649 GSTNGTF 669 S NGTF Sbjct: 139 ESANGTF 145
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