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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951371
Clone id TST38A01NGRL0011_D19
Library
Length 692
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_D19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AAAAAAGTTGGCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCT
GCCGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCT
ATGTTGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTT
GGCGAGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTAC
TTGGGCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTA
ATTCTCATGGGCGCTGTTGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAG
GATCCCATCTACCCTGGTGGCTCCTTTGACCCCTTGGGCCTGGCAGACGACCCGGAGGCA
TTTGCTGAGCTGAAGGTGAAGGAACTGAAGAACGGCCGTCTGGCCATGTTCTCCATGTTC
GGCTTCTTCGTGCAGGCCATCGTTACCGGCAAGGGTCCTATTGAAAACCTGTCTGATCAC
TTGGCGGACCCCGCCATCAACAACGCCTGGGCTTACGCCACCAACTTCACCCCCGGAAAG
TGAAACGGAGCTGTCCTGGCTGTTCAATTGTGGCTATGGCCTTCGTCTTAAGTGGTTAAA
CGAATGTTGTGTAACTCATTGAGCTTTTTTGG
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 195
Score (bit) 403.0
E-value 1.0e-112
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951371|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_D19, 5'
         (679 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   403   e-112
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   386   e-107
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   384   e-106
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   384   e-106
sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty...   384   e-106
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   383   e-106
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   383   e-106
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   382   e-106
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   382   e-106
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   382   e-106
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   382   e-105
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   382   e-105
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   382   e-105
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   381   e-105
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   381   e-105
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   381   e-105
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   380   e-105
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   380   e-105
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   380   e-105
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   379   e-105
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   379   e-105
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   379   e-104
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   378   e-104
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   378   e-104
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   378   e-104
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   378   e-104
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   377   e-104
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   376   e-104
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   375   e-103
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   374   e-103

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  403 bits (1035), Expect = e-112
 Identities = 193/195 (98%), Positives = 195/195 (100%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVW 130

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP
Sbjct: 131 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 190

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 250

Query: 543 INNAWAYATNFTPGK 587
           +NNAWAYATNFTPGK
Sbjct: 251 VNNAWAYATNFTPGK 265


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  386 bits (991), Expect = e-107
 Identities = 182/195 (93%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 241 NNNAWAYATNFVPGK 255


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  384 bits (986), Expect = e-106
 Identities = 182/195 (93%), Positives = 189/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 190

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 191 GGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 251 NNNAWAYATNFVPGK 265


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  384 bits (985), Expect = e-106
 Identities = 181/195 (92%), Positives = 189/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 132

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YP
Sbjct: 133 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYP 192

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 193 GGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 253 NNNAWAYATNFVPGK 267


>sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII type
           1 (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 206

 Score =  384 bits (985), Expect = e-106
 Identities = 181/195 (92%), Positives = 189/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+ WAMLGALGCV PELL++NGVKFGEAVW
Sbjct: 12  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVW 71

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYP
Sbjct: 72  FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 131

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 132 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 191

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 192 NNNAWAYATNFVPGK 206


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  383 bits (984), Expect = e-106
 Identities = 180/195 (92%), Positives = 189/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 132

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YP
Sbjct: 133 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYP 192

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 193 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252

Query: 543 INNAWAYATNFTPGK 587
            NNAWA+ATNF PGK
Sbjct: 253 NNNAWAFATNFVPGK 267


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
          Length = 267

 Score =  383 bits (983), Expect = e-106
 Identities = 180/195 (92%), Positives = 188/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 132

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YP
Sbjct: 133 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYP 192

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP++NL DHLADP 
Sbjct: 193 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPV 252

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 253 NNNAWAYATNFVPGK 267


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
           1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
          Length = 274

 Score =  382 bits (982), Expect = e-106
 Identities = 181/195 (92%), Positives = 188/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPE FAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 80  GEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 139

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYP
Sbjct: 140 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYP 199

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP 
Sbjct: 200 GGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 260 NNNAWAYATNFVPGK 274


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  382 bits (982), Expect = e-106
 Identities = 180/195 (92%), Positives = 189/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 72  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 131

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YP
Sbjct: 132 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYP 191

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 192 GGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251

Query: 543 INNAWAYATNFTPGK 587
            NNAW+YATNF PGK
Sbjct: 252 NNNAWSYATNFVPGK 266


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  382 bits (981), Expect = e-106
 Identities = 178/195 (91%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYP 190

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GG+FDPLGLADDPEAFA++KVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 191 GGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 251 NNNAWAYATNFVPGK 265
tr_hit_id Q40771
Definition tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 OS=Picea abies
Align length 195
Score (bit) 386.0
E-value 1.0e-106
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951371|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_D19, 5'
         (679 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding...   386   e-106
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding...   386   e-106
tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus ...   385   e-105
tr|Q40788|Q40788_PINCO Chlorophyll a/b binding protein OS=Pinus ...   385   e-105
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   385   e-105
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea...   385   e-105
tr|O64448|O64448_NICSY Light harvesting chlorophyll a/b-binding ...   385   e-105
tr|Q41234|Q41234_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   385   e-105
tr|B4G143|B4G143_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   385   e-105
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   385   e-105
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   384   e-105
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   384   e-105
tr|Q1EPK5|Q1EPK5_MUSAC Chlorophyll A-B binding protein (CAB), pu...   384   e-105
tr|Q1EP45|Q1EP45_MUSBA Chlorophyll A-B binding protein (CAB), pu...   384   e-105
tr|O64449|O64449_NICSY Light harvesting chlorophyll a/b-binding ...   384   e-105
tr|O64447|O64447_NICSY Light harvesting chlorophyll a/b-binding ...   384   e-105
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   384   e-105
tr|O64450|O64450_NICSY Light harvesting chlorophyll a/b-binding ...   384   e-105
tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ...   384   e-105
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   384   e-105
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque...   383   e-105
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   383   e-105
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   383   e-105
tr|B8XLF1|B8XLF1_SOLNI Putative chloroplast chlorophyll a/b bind...   383   e-105
tr|A2WUJ5|A2WUJ5_ORYSI Putative uncharacterized protein OS=Oryza...   383   e-105
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   383   e-105
tr|O48657|O48657_FAGCR Chlorophyll a/b-binding protein OS=Fagus ...   383   e-105
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote...   383   e-105
tr|A7QQL7|A7QQL7_VITVI Chromosome undetermined scaffold_143, who...   383   e-105
tr|A5BAI4|A5BAI4_VITVI Putative uncharacterized protein (Chromos...   383   e-105

>tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding
           protein Lhcb1*2-2 OS=Picea abies GN=Lhcb1*2-2 PE=2 SV=1
          Length = 275

 Score =  386 bits (991), Expect = e-106
 Identities = 181/195 (92%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 81  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 140

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAG+QIF+EGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DPIYP
Sbjct: 141 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYP 200

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP 
Sbjct: 201 GGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 260

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 261 TNNAWAYATNFVPGK 275


>tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding
           protein Lhcb1*2-1 OS=Picea abies GN=Lhcb1*2-1 PE=2 SV=1
          Length = 274

 Score =  386 bits (991), Expect = e-106
 Identities = 181/195 (92%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 80  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 139

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAG+QIF+EGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DPIYP
Sbjct: 140 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYP 199

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP 
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 260 TNNAWAYATNFVPGK 274


>tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus
           contorta GN=cab PE=4 SV=1
          Length = 274

 Score =  385 bits (990), Expect = e-105
 Identities = 182/195 (93%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 80  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 139

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYP
Sbjct: 140 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYP 199

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP 
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 260 SNNAWAYATNFVPGK 274


>tr|Q40788|Q40788_PINCO Chlorophyll a/b binding protein OS=Pinus
           contorta GN=CAB PE=3 SV=1
          Length = 274

 Score =  385 bits (990), Expect = e-105
 Identities = 182/195 (93%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 80  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 139

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYP
Sbjct: 140 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYP 199

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP 
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 260 SNNAWAYATNFVPGK 274


>tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea
           mays PE=2 SV=1
          Length = 265

 Score =  385 bits (990), Expect = e-105
 Identities = 181/195 (92%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYP 190

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 251 NNNAWAYATNFVPGK 265


>tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 274

 Score =  385 bits (990), Expect = e-105
 Identities = 182/195 (93%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 80  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 139

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DPIYP
Sbjct: 140 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYP 199

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP 
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 260 NNNAWAYATNFVPGK 274


>tr|O64448|O64448_NICSY Light harvesting chlorophyll a/b-binding
           protein OS=Nicotiana sylvestris GN=Lhcb1*7 PE=3 SV=1
          Length = 267

 Score =  385 bits (989), Expect = e-105
 Identities = 182/195 (93%), Positives = 189/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 132

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YP
Sbjct: 133 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYP 192

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 193 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 253 NNNAWAYATNFVPGK 267


>tr|Q41234|Q41234_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=LHCPII PE=2 SV=1
          Length = 274

 Score =  385 bits (988), Expect = e-105
 Identities = 182/195 (93%), Positives = 189/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 80  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 139

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYP
Sbjct: 140 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYP 199

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP 
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLTDHLADPV 259

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 260 NNNAWAYATNFVPGK 274


>tr|B4G143|B4G143_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 264

 Score =  385 bits (988), Expect = e-105
 Identities = 180/195 (92%), Positives = 189/195 (96%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 70  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 129

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YP
Sbjct: 130 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYP 189

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP 
Sbjct: 190 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPVENLADHLADPV 249

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 250 NNNAWAYATNFVPGK 264


>tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 266

 Score =  385 bits (988), Expect = e-105
 Identities = 180/195 (92%), Positives = 190/195 (97%)
 Frame = +3

Query: 3   GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 182
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVW
Sbjct: 72  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 131

Query: 183 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 362
           FKAGSQIF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YP
Sbjct: 132 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYP 191

Query: 363 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA 542
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ADP 
Sbjct: 192 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPV 251

Query: 543 INNAWAYATNFTPGK 587
            NNAWAYATNF PGK
Sbjct: 252 NNNAWAYATNFVPGK 266