DK951378 |
Clone id |
TST38A01NGRL0011_E02 |
Library |
TST38 |
Length |
699 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_E02. 5' end sequence. |
Accession |
DK951378 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
AGAGCATCTATGTTTCTCAATCGCTTCCTTTTGTTGCATCGACGAGAAAATTGAGCTGTT TGAAAGTAAACCCATTGATCTTGTTACAAAGGAGGAGGCCATGTGGGCAACATTCATGTC TATTTGTGAGGAGAAGGCCTACAAGGAAGTGGTCCTCTCTCCAAATCAATGCTGCCCAAG ACACAGATACTCAGGCCGGCCCAACTTCTCCTGCAGCTTCCATCGAACTTGGCCTCACTA CCTTCAAGAAAGGCAGGGTCAAGGATGCTTTGGCTCAATTTGACGCAGCACTCACCATGA ACCCCAAGCCAGAGGAGGCTCAGGCAGCTCTCTATAATAAAGCATGCTGCCATGCATATC GAAAGGAAGAACAACTGGCCTCTGAGGCCCTCCGTCAAGCTCTTCGGGATTATGGATTGA AATTCAGTGTTATTCTTAATGACCCTGACCTGGCATCGTTTAGAAGCACACAGGAGTTCA AGAAGTTGCAAGATGAGGCTCGGAAGGGAGGGCAAGATGTGGGTCAAGGTTTCAGAAGAG ATTTGAAGCTTATTGGAGAGGTACAAGCTCCATTTCGAGCTGTGCGCAAAACTTTGTATG TAGTGCTATCTGCTGCAGCTGGAATATCAACAATTATCAATGGACCAAGGTTATTTCGAG CAATTCAAGGCGGGGGAGAATGCTCCGGGATGTTTGGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8DIQ6 |
Definition |
sp|Q8DIQ6|YCF3_THEEB Photosystem I assembly protein ycf3 OS=Thermosynechococcus elongatus (strain BP-1) |
Align length |
58 |
Score (bit) |
34.3 |
E-value |
0.66 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q095 |
Definition |
tr|A7Q095|A7Q095_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
169 |
Score (bit) |
218.0 |
E-value |
4.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951378|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_E02, 5' (699 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q095|A7Q095_VITVI Chromosome chr7 scaffold_42, whole genome... 218 4e-55 tr|A9SDQ5|A9SDQ5_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54 tr|Q5ZBW3|Q5ZBW3_ORYSJ cDNA clone:001-009-G10, full insert seque... 210 8e-53 tr|B8A7X3|B8A7X3_ORYSI Putative uncharacterized protein OS=Oryza... 210 8e-53 tr|B4G0A6|B4G0A6_MAIZE Putative uncharacterized protein OS=Zea m... 208 3e-52 tr|B4FLK9|B4FLK9_MAIZE Putative uncharacterized protein OS=Zea m... 208 3e-52 tr|B6SWL0|B6SWL0_MAIZE Putative uncharacterized protein OS=Zea m... 207 4e-52 tr|A2ZT15|A2ZT15_ORYSJ Putative uncharacterized protein OS=Oryza... 202 1e-50 tr|A5BYD7|A5BYD7_VITVI Putative uncharacterized protein OS=Vitis... 202 2e-50 tr|Q9SRY4|Q9SRY4_ARATH F22D16.9 protein OS=Arabidopsis thaliana ... 200 8e-50 tr|Q00YR0|Q00YR0_OSTTA Homology to unknown gene OS=Ostreococcus ... 102 2e-20 tr|A4S4X1|A4S4X1_OSTLU Predicted protein (Fragment) OS=Ostreococ... 96 3e-18 tr|A1YSB4|A1YSB4_CHLRE Photosystem-II repair protein OS=Chlamydo... 87 8e-16 tr|Q9AT39|Q9AT39_SOYBN SHOOT1 protein OS=Glycine max GN=SHOOT1 P... 68 5e-10 tr|A7P0A9|A7P0A9_VITVI Chromosome chr6 scaffold_3, whole genome ... 66 2e-09 tr|Q94BS2|Q94BS2_ARATH Putative uncharacterized protein At1g5548... 65 4e-09 tr|Q8L972|Q8L972_ARATH Putative uncharacterized protein OS=Arabi... 65 4e-09 tr|B7FKN6|B7FKN6_MEDTR Putative uncharacterized protein OS=Medic... 64 7e-09 tr|A9NVF4|A9NVF4_PICSI Putative uncharacterized protein OS=Picea... 62 3e-08 tr|Q9LKK3|Q9LKK3_ORYSA Putative tyrosine phosphatase (Fragment) ... 62 5e-08 tr|Q69LC1|Q69LC1_ORYSJ Os07g0171100 protein OS=Oryza sativa subs... 62 5e-08 tr|Q69LC0|Q69LC0_ORYSJ cDNA clone:001-045-E07, full insert seque... 62 5e-08 tr|A2YIK9|A2YIK9_ORYSI Putative uncharacterized protein OS=Oryza... 62 5e-08 tr|A5AKU0|A5AKU0_VITVI Putative uncharacterized protein OS=Vitis... 61 6e-08 tr|Q710P9|Q710P9_ORYSA Putative tyrosine phosphatase (Fragment) ... 58 7e-07 tr|A9RPD5|A9RPD5_PHYPA Predicted protein OS=Physcomitrella paten... 57 9e-07 tr|B4W4W1|B4W4W1_9CYAN Tetratricopeptide repeat domain protein O... 54 1e-05 tr|A8IBH6|A8IBH6_CHLRE Predicted protein OS=Chlamydomonas reinha... 54 1e-05 tr|B2J423|B2J423_NOSP7 TPR repeat-containing protein OS=Nostoc p... 51 6e-05 tr|B4VZK9|B4VZK9_9CYAN Tetratricopeptide repeat domain protein O... 50 1e-04
>tr|A7Q095|A7Q095_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027965001 PE=4 SV=1 Length = 436
Score = 218 bits (554), Expect = 4e-55 Identities = 108/169 (63%), Positives = 131/169 (77%) Frame = +3
Query: 168 NAAQDTDTQAGPTSPAASIELGLTTFKKGRVKDALAQFDAALTMNPKPEEAQAALYNKAC 347 +++ T +A + + + LGL+ F +GRVKDALAQF+ ALT++P P EAQAALYNKAC Sbjct: 44 SSSSSTSPEADLQTAESRVNLGLSLFSRGRVKDALAQFETALTLDPNPMEAQAALYNKAC 103
Query: 348 CHAYRKEEQLASEALRQALRDYGLKFSVILNDPDLASFRSTQEFKKLQDEARKGGQDVGQ 527 CHAYR E + A++ LR ALR+Y LKFS ILNDPDLASFR+ EFK+LQ+EAR GG+D+G Sbjct: 104 CHAYRGEGKKAADCLRTALREYNLKFSTILNDPDLASFRALPEFKELQEEARLGGEDIGY 163
Query: 528 GFRRDLKLIGEVQAPFRAVRKTLYVVLSAAAGISTIINGPRLFRAIQGG 674 FRRDLKLI EVQAPFR VR+ YV SAAAGIST PRLFRAI+GG Sbjct: 164 SFRRDLKLISEVQAPFRGVRRFFYVAFSAAAGISTFFTIPRLFRAIKGG 212
>tr|A9SDQ5|A9SDQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164395 PE=4 SV=1 Length = 458
Score = 216 bits (550), Expect = 1e-54 Identities = 123/230 (53%), Positives = 152/230 (66%), Gaps = 11/230 (4%) Frame = +3
Query: 36 ASTR-KLSCLKVNPLILLQRRRPCGQH---------SCLFVRRRPTRKWSSLQINAAQDT 185 AS R + S + L+LL RR G+ +C R +R+ ++ + + Sbjct: 18 ASVRARCSAPRAGSLVLLDERRRRGERIVTQDRSNVNCAPGRAMGSRRHVLVRASDSNIA 77
Query: 186 DTQ-AGPTSPAASIELGLTTFKKGRVKDALAQFDAALTMNPKPEEAQAALYNKACCHAYR 362 ++ A P+SPA +I GL F KGRVKDALA FDAAL MNP EEAQAALYNKACCH Sbjct: 78 SSETATPSSPADAINSGLALFSKGRVKDALALFDAALEMNPSEEEAQAALYNKACCHVRS 137
Query: 363 KEEQLASEALRQALRDYGLKFSVILNDPDLASFRSTQEFKKLQDEARKGGQDVGQGFRRD 542 +E + AS+ALR+AL+ Y LKFSVILNDPD+A FR+ EFK+LQ+EARKGG++VG FRRD Sbjct: 138 EEGKEASKALRRALKQYNLKFSVILNDPDMAPFRAMPEFKQLQEEARKGGEEVGGSFRRD 197
Query: 543 LKLIGEVQAPFRAVRKTLYVVLSAAAGISTIINGPRLFRAIQGGGECSGM 692 LKLI EVQAPFR +RK YV L AAGIST+ PR AIQGG G+ Sbjct: 198 LKLISEVQAPFRGIRKFFYVALFLAAGISTLFTVPRFILAIQGGDGAPGV 247
>tr|Q5ZBW3|Q5ZBW3_ORYSJ cDNA clone:001-009-G10, full insert sequence OS=Oryza sativa subsp. japonica GN=P0514H03.13 PE=2 SV=1 Length = 455
Score = 210 bits (534), Expect = 8e-53 Identities = 105/160 (65%), Positives = 124/160 (77%) Frame = +3
Query: 195 AGPTSPAASIELGLTTFKKGRVKDALAQFDAALTMNPKPEEAQAALYNKACCHAYRKEEQ 374 A PT+ + + LGL F KGRVKDAL QF+ AL +NP P EAQAALYNKACCHA+R+E Sbjct: 74 AVPTAESC-VNLGLELFSKGRVKDALEQFENALELNPNPVEAQAALYNKACCHAFREESN 132
Query: 375 LASEALRQALRDYGLKFSVILNDPDLASFRSTQEFKKLQDEARKGGQDVGQGFRRDLKLI 554 A++ LR ALRDY LKF ILNDPDLA FR++ EFK+LQ+EA +GG+D+G GFRRDLKLI Sbjct: 133 KAADCLRTALRDYNLKFGTILNDPDLAPFRASPEFKELQEEALRGGEDIGSGFRRDLKLI 192
Query: 555 GEVQAPFRAVRKTLYVVLSAAAGISTIINGPRLFRAIQGG 674 EVQAPFR VR+ YV L+AAAGIST PRL A+QGG Sbjct: 193 SEVQAPFRGVRRFFYVALTAAAGISTFFTIPRLILAVQGG 232
>tr|B8A7X3|B8A7X3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01883 PE=4 SV=1 Length = 455
Score = 210 bits (534), Expect = 8e-53 Identities = 105/160 (65%), Positives = 124/160 (77%) Frame = +3
Query: 195 AGPTSPAASIELGLTTFKKGRVKDALAQFDAALTMNPKPEEAQAALYNKACCHAYRKEEQ 374 A PT+ + + LGL F KGRVKDAL QF+ AL +NP P EAQAALYNKACCHA+R+E Sbjct: 74 AVPTAESC-VNLGLELFSKGRVKDALEQFENALELNPNPVEAQAALYNKACCHAFREESN 132
Query: 375 LASEALRQALRDYGLKFSVILNDPDLASFRSTQEFKKLQDEARKGGQDVGQGFRRDLKLI 554 A++ LR ALRDY LKF ILNDPDLA FR++ EFK+LQ+EA +GG+D+G GFRRDLKLI Sbjct: 133 KAADCLRTALRDYNLKFGTILNDPDLAPFRASPEFKELQEEALRGGEDIGSGFRRDLKLI 192
Query: 555 GEVQAPFRAVRKTLYVVLSAAAGISTIINGPRLFRAIQGG 674 EVQAPFR VR+ YV L+AAAGIST PRL A+QGG Sbjct: 193 SEVQAPFRGVRRFFYVALTAAAGISTFFTIPRLILAVQGG 232
>tr|B4G0A6|B4G0A6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 450
Score = 208 bits (529), Expect = 3e-52 Identities = 104/158 (65%), Positives = 124/158 (78%) Frame = +3
Query: 201 PTSPAASIELGLTTFKKGRVKDALAQFDAALTMNPKPEEAQAALYNKACCHAYRKEEQLA 380 PT+ + + LGL F KGRVKDAL QF+ AL +NP EAQAALYNKACCHAYR+E + A Sbjct: 71 PTAESC-VNLGLQLFSKGRVKDALEQFENALELNPTSIEAQAALYNKACCHAYREESKKA 129
Query: 381 SEALRQALRDYGLKFSVILNDPDLASFRSTQEFKKLQDEARKGGQDVGQGFRRDLKLIGE 560 +E LR+ALRDY LKF ILNDPDLA FR++ EFK+LQ+EA +GG+D+G GFRRDLKLI E Sbjct: 130 AECLREALRDYNLKFGTILNDPDLAPFRASPEFKELQEEALRGGEDIGSGFRRDLKLISE 189
Query: 561 VQAPFRAVRKTLYVVLSAAAGISTIINGPRLFRAIQGG 674 VQAPFR VR+ YV L+AAAGIST PRL A++GG Sbjct: 190 VQAPFRGVRRFFYVALTAAAGISTFFTIPRLVLAVRGG 227
>tr|B4FLK9|B4FLK9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 273
Score = 208 bits (529), Expect = 3e-52 Identities = 104/158 (65%), Positives = 124/158 (78%) Frame = +3
Query: 201 PTSPAASIELGLTTFKKGRVKDALAQFDAALTMNPKPEEAQAALYNKACCHAYRKEEQLA 380 PT+ + + LGL F KGRVKDAL QF+ AL +NP EAQAALYNKACCHAYR+E + A Sbjct: 71 PTAESC-VNLGLQLFSKGRVKDALEQFENALELNPTSIEAQAALYNKACCHAYREESKKA 129
Query: 381 SEALRQALRDYGLKFSVILNDPDLASFRSTQEFKKLQDEARKGGQDVGQGFRRDLKLIGE 560 +E LR+ALRDY LKF ILNDPDLA FR++ EFK+LQ+EA +GG+D+G GFRRDLKLI E Sbjct: 130 AECLREALRDYNLKFGTILNDPDLAPFRASPEFKELQEEALRGGEDIGSGFRRDLKLISE 189
Query: 561 VQAPFRAVRKTLYVVLSAAAGISTIINGPRLFRAIQGG 674 VQAPFR VR+ YV L+AAAGIST PRL A++GG Sbjct: 190 VQAPFRGVRRFFYVALTAAAGISTFFTIPRLVLAVRGG 227
>tr|B6SWL0|B6SWL0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 273
Score = 207 bits (528), Expect = 4e-52 Identities = 103/160 (64%), Positives = 125/160 (78%) Frame = +3
Query: 201 PTSPAASIELGLTTFKKGRVKDALAQFDAALTMNPKPEEAQAALYNKACCHAYRKEEQLA 380 PT+ + + +GL F KGRVKDAL QF+ AL +NP EAQAALYNKACCHAYR+E + A Sbjct: 71 PTAESC-VNIGLQLFSKGRVKDALEQFENALELNPTSIEAQAALYNKACCHAYREESKKA 129
Query: 381 SEALRQALRDYGLKFSVILNDPDLASFRSTQEFKKLQDEARKGGQDVGQGFRRDLKLIGE 560 +E LR+ALRDY LKF ILNDPDLA FR++ EFK+LQ+EA +GG+D+G GFRRDLKLI E Sbjct: 130 AECLREALRDYNLKFGTILNDPDLAPFRASPEFKELQEEALRGGEDIGSGFRRDLKLISE 189
Query: 561 VQAPFRAVRKTLYVVLSAAAGISTIINGPRLFRAIQGGGE 680 VQAPFR VR+ YV L+AAAGIST PRL A++GG + Sbjct: 190 VQAPFRGVRRFFYVALTAAAGISTFFTIPRLVLAVRGGDD 229
>tr|A2ZT15|A2ZT15_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001687 PE=4 SV=1 Length = 433
Score = 202 bits (515), Expect = 1e-50 Identities = 105/168 (62%), Positives = 124/168 (73%), Gaps = 8/168 (4%) Frame = +3
Query: 195 AGPTSPAASIELGLTTFKKGRV--------KDALAQFDAALTMNPKPEEAQAALYNKACC 350 A PT+ + + LGL F KGRV KDAL QF+ AL +NP P EAQAALYNKACC Sbjct: 74 AVPTAESC-VNLGLELFSKGRVGPGINSIVKDALEQFENALELNPNPVEAQAALYNKACC 132
Query: 351 HAYRKEEQLASEALRQALRDYGLKFSVILNDPDLASFRSTQEFKKLQDEARKGGQDVGQG 530 HA+R+E A++ LR ALRDY LKF ILNDPDLA FR++ EFK+LQ+EA +GG+D+G G Sbjct: 133 HAFREESNKAADCLRTALRDYNLKFGTILNDPDLAPFRASPEFKELQEEALRGGEDIGSG 192
Query: 531 FRRDLKLIGEVQAPFRAVRKTLYVVLSAAAGISTIINGPRLFRAIQGG 674 FRRDLKLI EVQAPFR VR+ YV L+AAAGIST PRL A+QGG Sbjct: 193 FRRDLKLISEVQAPFRGVRRFFYVALTAAAGISTFFTIPRLILAVQGG 240
>tr|A5BYD7|A5BYD7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033366 PE=4 SV=1 Length = 467
Score = 202 bits (514), Expect = 2e-50 Identities = 108/200 (54%), Positives = 131/200 (65%), Gaps = 31/200 (15%) Frame = +3
Query: 168 NAAQDTDTQAGPTSPAASIELGLTTFKKGRVKDALAQFDAALTMNPKPEEAQAALYNKAC 347 +++ T +A + + + LGL+ F +GRVKDALAQF+ ALT++P P EAQAALYNKAC Sbjct: 44 SSSSSTSPEADLQTAESRVNLGLSLFSRGRVKDALAQFETALTLDPNPMEAQAALYNKAC 103
Query: 348 CHAYRK-------------------------------EEQLASEALRQALRDYGLKFSVI 434 CHAY K E + A++ LR ALR+Y LKFS I Sbjct: 104 CHAYSKDFVYFILLVYTVLCEIQIVLYAFLHPHRGRGEGKXAADCLRTALREYNLKFSTI 163
Query: 435 LNDPDLASFRSTQEFKKLQDEARKGGQDVGQGFRRDLKLIGEVQAPFRAVRKTLYVVLSA 614 LNDPDLASFR+ EFK+LQ+EAR GG+D+G FRRDLKLI EVQAPFR VR+ YV SA Sbjct: 164 LNDPDLASFRALPEFKELQEEARLGGEDIGYSFRRDLKLISEVQAPFRGVRRFFYVAFSA 223
Query: 615 AAGISTIINGPRLFRAIQGG 674 AAGIST PRLFRAI+GG Sbjct: 224 AAGISTFFTIPRLFRAIKGG 243
>tr|Q9SRY4|Q9SRY4_ARATH F22D16.9 protein OS=Arabidopsis thaliana GN=At1g02910 PE=4 SV=1 Length = 453
Score = 200 bits (508), Expect = 8e-50 Identities = 105/187 (56%), Positives = 128/187 (68%), Gaps = 10/187 (5%) Frame = +3
Query: 144 RKWSS-LQINAAQDTDTQAGPTSPAAS---------IELGLTTFKKGRVKDALAQFDAAL 293 R W S L + A+ + + P SP + + GL FK+GRVKDAL QF+ AL Sbjct: 43 RNWDSHLFVYASSSSSPSSSPPSPNSPTDDLTAELCVNTGLDLFKRGRVKDALVQFETAL 102
Query: 294 TMNPKPEEAQAALYNKACCHAYRKEEQLASEALRQALRDYGLKFSVILNDPDLASFRSTQ 473 ++ P P E+QAA YNKACCHAYR E + A + LR ALRDY LKF+ ILNDPDLASFR+ Sbjct: 103 SLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRDYNLKFATILNDPDLASFRALP 162
Query: 474 EFKKLQDEARKGGQDVGQGFRRDLKLIGEVQAPFRAVRKTLYVVLSAAAGISTIINGPRL 653 EFK+LQ+EAR GG+D+G FRRDLKLI EV+APFR VRK Y +AAAGIS PRL Sbjct: 163 EFKELQEEARLGGEDIGDNFRRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRL 222
Query: 654 FRAIQGG 674 +AI+GG Sbjct: 223 VQAIRGG 229
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