DK951382 |
Clone id |
TST38A01NGRL0011_E06 |
Library |
TST38 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_E06. 5' end sequence. |
Accession |
DK951382 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL21Contig1 |
Sequence |
GGACTGGCAATGTGGTTGAAGCTGTGAGGCACGTGCGCTCTGTACTTGGTGAAATCAGGA GGCTTCAAAGCCTTGATGATGATGAAGTTTTTACGTTTGCAAAGGAAATTGCCGCCCCTT ATGAGCTTGTGAGGCAAACTAAGCAACTTGGGCGCCTTCCAGTGGTAAATTTTGCAGCCG GTGGTGTTGCAACTCCTGCTGACGCAGCTATGATGATGCAGCTTGGGTGTGACGGTGTGT TTGTTGGGTCTGGTATCTTCAAAAGTGGCAACCCCTCTCAGCGTGCTCGAGCCATAGTTT CTGCTGTGACTCACTTCAATGACCCTAGCATTATAGCAGATGTCAGCTGCGGTTTGGGTG AAGCTATGGTGGGTATCAATCTTAATGACAAGAAAGTTGAGCGCTTTGCTGCAAGGTCTG ATTAATGTGGAGAATGGATTCGTACAAATGCTGTATGTGTTGTGTGTCACTACGGGTGAG GCATCCGAGGCTTGTGTTCAAGCCCTTGTTGTTCAGCAAGTTGTTATGGTAGATAGTACT TTAGTTCACTTAGAACTCTTTGTCTGATTGCCTTTGGTTATTGGCAGTGCTGGTAGACCA TTTAACGGAACCATTCATTCTCACTCCAGCAGAACCTGAGCAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
140 |
Score (bit) |
218.0 |
E-value |
2.0e-56 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TIQ8 |
Definition |
tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
140 |
Score (bit) |
216.0 |
E-value |
1.0e-54 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951382|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_E06, 5' (644 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 215 2e-54 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 215 2e-54 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 213 6e-54 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 209 2e-52 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 209 2e-52 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 207 3e-52 tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome ... 207 3e-52 tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 206 1e-51 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 206 1e-51 tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza... 206 1e-51 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 204 5e-51 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 203 8e-51 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 202 1e-50 tr|B2BGT9|B2BGT9_OLEEU Putative SNZ1 protein (Fragment) OS=Olea ... 202 1e-50 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 201 4e-50 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 198 2e-49 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 181 3e-44 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 179 1e-43 tr|Q01DD0|Q01DD0_OSTTA Sor-like protein (ISS) OS=Ostreococcus ta... 179 1e-43 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 176 1e-42 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 172 1e-41 tr|Q2RMJ0|Q2RMJ0_MOOTA Vitamin B6 biosynthesis protein OS=Moorel... 166 1e-39 tr|A3C1S6|A3C1S6_ORYSJ Putative uncharacterized protein OS=Oryza... 166 1e-39 tr|A9B891|A9B891_HERA2 Pyridoxine biosynthesis protein OS=Herpet... 164 6e-39 tr|B6JV77|B6JV77_SCHJP Pyridoxal biosynthesis lyase pdxS OS=Schi... 159 2e-37 tr|A1HUH0|A1HUH0_9FIRM Pyridoxine biosynthesis protein OS=Thermo... 158 2e-37 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 158 2e-37 tr|B7A686|B7A686_THEAQ Pyridoxine biosynthesis protein OS=Thermu... 158 3e-37 tr|B1I157|B1I157_DESAP Pyridoxine biosynthesis protein OS=Desulf... 157 4e-37
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 216 bits (549), Expect = 1e-54 Identities = 110/140 (78%), Positives = 122/140 (87%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGNVVEAVRH RSVLGEIRRLQSLDDDEVF+FAKEIAAPYELVRQTKQLGRLPVVNF Sbjct: 176 TGNVVEAVRHTRSVLGEIRRLQSLDDDEVFSFAKEIAAPYELVRQTKQLGRLPVVNFAAG 235
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH+ND ++A+VS LGE Sbjct: 236 GVATPADAALMMQLGCDGVFVGSGIFKSGDPAKRARAIVEAVTHYNDAHVLAEVSENLGE 295
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINL++KKVERFAARS+ Sbjct: 296 AMVGINLSNKKVERFAARSE 315
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 215 bits (548), Expect = 2e-54 Identities = 110/140 (78%), Positives = 120/140 (85%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGNVVEAVRH RSVLG+IRRLQSLDDDEVFTFAKEI APYELVRQTKQLGRLPVVNF Sbjct: 175 TGNVVEAVRHTRSVLGDIRRLQSLDDDEVFTFAKEIQAPYELVRQTKQLGRLPVVNFAAG 234
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH+ D ++ADVS LGE Sbjct: 235 GVATPADAALMMQLGCDGVFVGSGIFKSGDPAKRARAIVEAVTHYRDAHVLADVSENLGE 294
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINL+DKKVERFAARS+ Sbjct: 295 AMVGINLSDKKVERFAARSE 314
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 215 bits (547), Expect = 2e-54 Identities = 109/140 (77%), Positives = 121/140 (86%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGNVVEAVRH RSVLG+IRRLQSLDDDEVFT+AKEI APYELVRQTKQLGRLPVVNF Sbjct: 174 TGNVVEAVRHTRSVLGDIRRLQSLDDDEVFTYAKEIQAPYELVRQTKQLGRLPVVNFAAG 233
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH+ND ++A+VS LGE Sbjct: 234 GVATPADAALMMQLGCDGVFVGSGIFKSGDPAKRARAIVEAVTHYNDARVLAEVSENLGE 293
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINL+DKKVERFAARS+ Sbjct: 294 AMVGINLSDKKVERFAARSE 313
>tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226199 PE=4 SV=1 Length = 315
Score = 213 bits (543), Expect = 6e-54 Identities = 109/140 (77%), Positives = 120/140 (85%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGNVVEAVRH RSVLGEIRRLQSLDDDEVFTFAK+IAAPYELVRQTKQLGRLPVVNF Sbjct: 176 TGNVVEAVRHTRSVLGEIRRLQSLDDDEVFTFAKQIAAPYELVRQTKQLGRLPVVNFAAG 235
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSGIFKSG+P +R RAIV AVTH+ND ++A++S LGE Sbjct: 236 GVATPADAALMMQLGCDGVFVGSGIFKSGDPVKRGRAIVEAVTHYNDAHMLAEMSENLGE 295
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINL+DKKVERFAARS+ Sbjct: 296 AMVGINLSDKKVERFAARSE 315
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 209 bits (531), Expect = 2e-52 Identities = 103/140 (73%), Positives = 120/140 (85%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGNVVEAVRHVRSV+G++R L+S+DDDEVF +AK IAAPY+LV QTKQLGRLPVV F Sbjct: 178 TGNVVEAVRHVRSVMGDVRALRSMDDDEVFAYAKRIAAPYDLVMQTKQLGRLPVVQFAAG 237
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGE Sbjct: 238 GVATPADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGE 297
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINLND KVER+AARS+ Sbjct: 298 AMVGINLNDPKVERYAARSE 317
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 209 bits (531), Expect = 2e-52 Identities = 103/140 (73%), Positives = 120/140 (85%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGNVVEAVRHVRSV+G++R L+S+DDDEVF +AK IAAPY+LV QTKQLGRLPVV F Sbjct: 241 TGNVVEAVRHVRSVMGDVRALRSMDDDEVFAYAKRIAAPYDLVMQTKQLGRLPVVQFAAG 300
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGE Sbjct: 301 GVATPADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGE 360
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINLND KVER+AARS+ Sbjct: 361 AMVGINLNDPKVERYAARSE 380
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 207 bits (528), Expect = 3e-52 Identities = 99/140 (70%), Positives = 121/140 (86%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGN+VEAVRHVRSV+G+IR L+++DDDEVFTFAK+IAAPY+LV QTKQLGRLPVV+F Sbjct: 171 TGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAG 230
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP ++A++SCGLGE Sbjct: 231 GVATPADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGE 290
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVG+NLND VERFA RS+ Sbjct: 291 AMVGLNLNDSNVERFANRSE 310
>tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024095001 PE=4 SV=1 Length = 197
Score = 207 bits (528), Expect = 3e-52 Identities = 99/140 (70%), Positives = 122/140 (87%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGN+VEAVRHVRSV+GEIR L+++DDDEVFT+AK+++APY+LV QTKQLGRLPVV+F Sbjct: 58 TGNIVEAVRHVRSVMGEIRVLRNMDDDEVFTYAKKLSAPYDLVMQTKQLGRLPVVHFAAG 117
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP ++A+VSCGLGE Sbjct: 118 GVATPADAALMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGE 177
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINLND KVER+A RS+ Sbjct: 178 AMVGINLNDDKVERYANRSE 197
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 206 bits (523), Expect = 1e-51 Identities = 100/140 (71%), Positives = 119/140 (85%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGN++EAVRHVRSV+ +IR L+++DDDEVFTFAK IAAPY+LV QTKQLGRLPVV+F Sbjct: 172 TGNIIEAVRHVRSVMSDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAG 231
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP I+A+VSCGLGE Sbjct: 232 GVATPADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGE 291
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINL D KVERFA RS+ Sbjct: 292 AMVGINLTDDKVERFANRSE 311
>tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 318
Score = 206 bits (523), Expect = 1e-51 Identities = 102/140 (72%), Positives = 120/140 (85%) Frame = +3
Query: 3 TGNVVEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXX 182 TGNVVEAVRHVRSV+G+IR L+++DDDEVF++AK IAAPY+LV QTKQLGRLPVV F Sbjct: 179 TGNVVEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAG 238
Query: 183 XXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGE 362 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP I+A+VS GLGE Sbjct: 239 GVATPADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGE 298
Query: 363 AMVGINLNDKKVERFAARSD 422 AMVGINL+D KVERFAARS+ Sbjct: 299 AMVGINLSDPKVERFAARSE 318
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