DK951384 |
Clone id |
TST38A01NGRL0011_E08 |
Library |
TST38 |
Length |
680 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_E08. 5' end sequence. |
Accession |
DK951384 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
ATTAATTCCTCCCATTGATGGCAGTGTGGACAGTGAGCATGATTTGGCTGCCATGGTTCA CGACTTCATGGAAAATGGTAGCTTTGAGTCCGACTTCCCAGAGAGCAGTGATGGGGAAAG TGGTCTTCCCAGCTGTTCCCGGCTGTTCGAAACTCTTCAGGCTCTGAAGCTCAATACAAC CTTTGTAGAAAAGGAAATTTTGTCTATTCTCTCAGTGTTCTTGTCCTCCGTCAAGGATGT AGACTTGTTTTGCCTGACGTCTGGGACAGAATGTAAAGGTGCCTGCATTAGACGAATGCT TGTGAAGCATCTCAGGGTTTGGGGTTATGATGCTGCTATTCGCAGCTCTAAGTGGCATAA TTCAGGGAAAGTGCCTGGGGGCGAGTACGAGTACATCGATGTCTTAGTTAAAGGAGAGAA GAAACCAGCTGAGCGCTTGATTGTGGATGTGGACTTTCAAAGCCAATTTGAGATTGCACG ACCCACGCATTCGTATGCTGCTGCTCTCAAAAGTTTACCTGTTGTCTTTATTGGTTCTGA GGAAAAGCTCAGGCAAATTTTGAAAGTTATGGCTGAAGCTGCCAAAATGTCTTTGAAACA AAATTCAATGCCACTTCCTCCGTGGAGAACGCTTGATTATATGTTAGCAAAATGGTGGTC TAGTGCGGACGACACTCGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A4SJ23 |
Definition |
sp|A4SJ23|SYP_AERS4 Prolyl-tRNA synthetase OS=Aeromonas salmonicida (strain A449) |
Align length |
77 |
Score (bit) |
33.1 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LS24 |
Definition |
tr|B8LS24|B8LS24_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
217 |
Score (bit) |
219.0 |
E-value |
2.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951384|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_E08, 5' (680 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LS24|B8LS24_PICSI Putative uncharacterized protein OS=Picea... 219 2e-55 tr|A9NV30|A9NV30_PICSI Putative uncharacterized protein OS=Picea... 207 5e-52 tr|A7PIW1|A7PIW1_VITVI Chromosome chr13 scaffold_17, whole genom... 202 2e-50 tr|B4FP41|B4FP41_MAIZE Plant-specific domain TIGR01615 family pr... 197 7e-49 tr|A9TFZ9|A9TFZ9_PHYPA Predicted protein OS=Physcomitrella paten... 195 3e-48 tr|O48813|O48813_ARATH Putative uncharacterized protein At2g3965... 193 7e-48 tr|A9T1S5|A9T1S5_PHYPA Predicted protein (Fragment) OS=Physcomit... 189 2e-46 tr|A9SPM0|A9SPM0_PHYPA Predicted protein OS=Physcomitrella paten... 182 1e-44 tr|A9RMP6|A9RMP6_PHYPA Predicted protein (Fragment) OS=Physcomit... 181 3e-44 tr|Q5JL24|Q5JL24_ORYSJ Putative uncharacterized protein P0459B04... 175 3e-42 tr|A2WZM2|A2WZM2_ORYSI Putative uncharacterized protein OS=Oryza... 175 3e-42 tr|A3A208|A3A208_ORYSJ Putative uncharacterized protein OS=Oryza... 171 4e-41 tr|A9TQ42|A9TQ42_PHYPA Predicted protein (Fragment) OS=Physcomit... 166 1e-39 tr|A9S586|A9S586_PHYPA Predicted protein (Fragment) OS=Physcomit... 161 3e-38 tr|A9TR24|A9TR24_PHYPA Predicted protein (Fragment) OS=Physcomit... 154 4e-36 tr|A9S9X9|A9S9X9_PHYPA Predicted protein (Fragment) OS=Physcomit... 154 7e-36 tr|A9SPN3|A9SPN3_PHYPA Predicted protein OS=Physcomitrella paten... 152 1e-35 tr|A9RV01|A9RV01_PHYPA Predicted protein (Fragment) OS=Physcomit... 152 1e-35 tr|A9TA63|A9TA63_PHYPA Predicted protein (Fragment) OS=Physcomit... 149 2e-34 tr|A9TD04|A9TD04_PHYPA Predicted protein (Fragment) OS=Physcomit... 142 3e-32 tr|Q8L7H9|Q8L7H9_ARATH Putative uncharacterized protein At4g1462... 139 2e-31 tr|Q570K5|Q570K5_ARATH Putative uncharacterized protein At4g1462... 135 2e-30 tr|A9RAW1|A9RAW1_PHYPA Predicted protein (Fragment) OS=Physcomit... 132 2e-29 tr|A9PG39|A9PG39_POPTR Putative uncharacterized protein OS=Popul... 130 1e-28 tr|A9SZ03|A9SZ03_PHYPA Predicted protein (Fragment) OS=Physcomit... 129 2e-28 tr|O23318|O23318_ARATH Putative uncharacterized protein dl3350c ... 128 3e-28 tr|A7PUJ1|A7PUJ1_VITVI Chromosome chr7 scaffold_31, whole genome... 128 3e-28 tr|Q7Y1H2|Q7Y1H2_ORYSJ Putative uncharacterized protein OSJNBa00... 128 4e-28 tr|Q6F396|Q6F396_ORYSJ Expressed protein (Putative uncharacteriz... 128 4e-28 tr|Q10C31|Q10C31_ORYSJ Os03g0796600 protein OS=Oryza sativa subs... 128 4e-28
>tr|B8LS24|B8LS24_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 378
Score = 219 bits (557), Expect = 2e-55 Identities = 107/217 (49%), Positives = 145/217 (66%), Gaps = 1/217 (0%) Frame = +2
Query: 17 DGSVDSEHDLAAMVHDFMENGSFESDFPESSDGESGLPSCSRLFETLQALKLNTTFVEKE 196 +GS DSE DLA MVHDF+ENGS D + E+G + +L ETLQ L + + E++ Sbjct: 88 NGSDDSESDLAVMVHDFIENGSGAQDVSGVAPAENGAATILKLNETLQGLASSISSPERD 147
Query: 197 XXXXXXXXXXXXKDVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNSGKVP 376 D DL C +S C G+CIR ++VK L+ GY+A++ +W+NSG+VP Sbjct: 148 LLSSIYQVLMNVNDTDLVCQSSRASCNGSCIRHLVVKSLKCSGYNASLCKIEWNNSGRVP 207
Query: 377 GGEYEYIDVLVKGEK-KPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVFIGSEEKLR 553 GG+YEYID++V PA+R+I+D DF++QFE+ARP Y A LK LP +FIG KL Sbjct: 208 GGQYEYIDIIVPDRNPNPADRIIIDTDFRTQFEVARPVPQYQATLKLLPAIFIGKAAKLE 267
Query: 554 QILKVMAEAAKMSLKQNSMPLPPWRTLDYMLAKWWSS 664 QIL+++ +AAK SL QNSMPLPPWRTL+YM AKW+S+ Sbjct: 268 QILQIVCKAAKCSLNQNSMPLPPWRTLEYMKAKWFSA 304
>tr|A9NV30|A9NV30_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 207 bits (527), Expect = 5e-52 Identities = 109/205 (53%), Positives = 140/205 (68%), Gaps = 1/205 (0%) Frame = +2
Query: 53 MVHDFMENGSFESDFP-ESSDGESGLPSCSRLFETLQALKLNTTFVEKEXXXXXXXXXXX 229 MV DFMENGS D SSD +SG S +L E+++ LK + EK+ Sbjct: 1 MVQDFMENGSSGQDGSCYSSDSDSGTTSILKLVESIKGLKTSVMPFEKDLLSLIHALILS 60
Query: 230 XKDVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNSGKVPGGEYEYIDVLV 409 ++D C G CK +CIR+ LVKHLR GY AA+ S+W + KVPGGEYEYIDV++ Sbjct: 61 -NNIDFHCSREGI-CKASCIRKSLVKHLRSIGYIAAVCKSEWKGTDKVPGGEYEYIDVIL 118
Query: 410 KGEKKPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVFIGSEEKLRQILKVMAEAAKM 589 +G+ + +ERLI+D+DFQS FEIARPT +Y ++ LPVV++G+ KL QIL+VM EAAK+ Sbjct: 119 EGDDRASERLIIDIDFQSHFEIARPTLAYVGIVRYLPVVYVGNLAKLEQILEVMVEAAKI 178
Query: 590 SLKQNSMPLPPWRTLDYMLAKWWSS 664 SLKQNSMPLPPWRTL Y+ AKW SS Sbjct: 179 SLKQNSMPLPPWRTLGYLRAKWLSS 203
>tr|A7PIW1|A7PIW1_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018495001 PE=4 SV=1 Length = 307
Score = 202 bits (513), Expect = 2e-50 Identities = 108/214 (50%), Positives = 138/214 (64%) Frame = +2
Query: 23 SVDSEHDLAAMVHDFMENGSFESDFPESSDGESGLPSCSRLFETLQALKLNTTFVEKEXX 202 S +SEHDLA MV DF+ENGS ++ SSD +SG + L E + K + E + Sbjct: 27 SHESEHDLAMMVSDFLENGSVGAESCCSSDSDSGFSDLAFLPEKISFYKHSMDRYESDLL 86
Query: 203 XXXXXXXXXXKDVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNSGKVPGG 382 + DL + SG C +CIR LVK LR+ GYDAA+ SS+W GKVPGG Sbjct: 87 SMVHSFMLSINETDLHFVNSGP-CNTSCIRFCLVKRLRLSGYDAAVCSSRWQGCGKVPGG 145
Query: 383 EYEYIDVLVKGEKKPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVFIGSEEKLRQIL 562 ++EYIDV+ + ERLI+D+DF+S FEIAR SY L SLPV+++GS KL+Q L Sbjct: 146 DHEYIDVVNYKDNGSTERLIIDIDFRSHFEIARAVESYDRILSSLPVIYVGSLTKLKQFL 205
Query: 563 KVMAEAAKMSLKQNSMPLPPWRTLDYMLAKWWSS 664 +VM EAA+ SLKQNSMPLPPWR+LDY+ AKW SS Sbjct: 206 QVMVEAARSSLKQNSMPLPPWRSLDYLEAKWQSS 239
>tr|B4FP41|B4FP41_MAIZE Plant-specific domain TIGR01615 family protein OS=Zea mays PE=2 SV=1 Length = 344
Score = 197 bits (500), Expect = 7e-49 Identities = 107/215 (49%), Positives = 135/215 (62%), Gaps = 2/215 (0%) Frame = +2
Query: 23 SVDSEHDLAAMVHDFMENGSF--ESDFPESSDGESGLPSCSRLFETLQALKLNTTFVEKE 196 S D + DLA +V DF+ENG+ D SSD ESGLP + L +T+ LK E E Sbjct: 61 SHDGDCDLAMLVTDFLENGATAGSGDSRNSSDSESGLPDLAHLADTISMLKQGGDEKENE 120
Query: 197 XXXXXXXXXXXXKDVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNSGKVP 376 + L +G +C G+CIR +LVK LR G DAA+ +SKW K+P Sbjct: 121 LLAMVHSLLLSIHEPQLQPFKTG-QCGGSCIRHLLVKLLRYSGNDAAVCTSKWQGFDKIP 179
Query: 377 GGEYEYIDVLVKGEKKPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVFIGSEEKLRQ 556 GG+YEYIDV++ G+ ERLIVD+DF+S FEIAR SY L SLPVVF+G+ +L+Q Sbjct: 180 GGDYEYIDVIMHGDTTAPERLIVDIDFRSHFEIARAVDSYGTLLNSLPVVFVGTLPRLKQ 239
Query: 557 ILKVMAEAAKMSLKQNSMPLPPWRTLDYMLAKWWS 661 L VM +AAK SLKQNSMPLPPWR+L Y+ AKW S Sbjct: 240 FLHVMVDAAKWSLKQNSMPLPPWRSLPYLQAKWQS 274
>tr|A9TFZ9|A9TFZ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169858 PE=4 SV=1 Length = 486
Score = 195 bits (495), Expect = 3e-48 Identities = 110/224 (49%), Positives = 137/224 (61%), Gaps = 7/224 (3%) Frame = +2
Query: 11 PIDGSVDSEHD-LAAMVHDFMENGSFESDFPESSDGESGLPSCSRLFETLQALKLNTTFV 187 P G+ D++ D LA+MVHDF+EN S FP D +SG P ++L + LQAL + + Sbjct: 194 PAQGNYDNDSDDLASMVHDFIENDS--PGFPNEDDSDSGSPGVTKLGDNLQALTSSYGGI 251
Query: 188 EKEXXXXXXXXXXXXK-DVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNS 364 E E D DL C + GT C+G CI+R++VK LR G+DAAI +KW + Sbjct: 252 EAELLNVVRRLVLGIDIDTDLICNSEGTNCRGGCIKRLVVKQLRAAGFDAAICKAKWEGN 311
Query: 365 GKVPGG-----EYEYIDVLVKGEKKPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVF 529 G V G EYEYIDV GE RLIVDVDFQ QF +AR T Y LK LP V Sbjct: 312 GCVLRGTLHMGEYEYIDVEGSGE-----RLIVDVDFQEQFVLARATPDYLTTLKLLPTVL 366
Query: 530 IGSEEKLRQILKVMAEAAKMSLKQNSMPLPPWRTLDYMLAKWWS 661 +G+ E+L QIL +M+EA K SL QNSMPLPPWRTLD+M +KW S Sbjct: 367 VGTTERLEQILPIMSEAVKTSLNQNSMPLPPWRTLDFMSSKWLS 410
>tr|O48813|O48813_ARATH Putative uncharacterized protein At2g39650 (At2g39650) OS=Arabidopsis thaliana GN=At2g39650 PE=2 SV=1 Length = 291
Score = 193 bits (491), Expect = 7e-48 Identities = 106/219 (48%), Positives = 137/219 (62%), Gaps = 3/219 (1%) Frame = +2
Query: 14 IDGSVDSEHDLAAMVHDFMENGSFESDFPE--SSDGESGLPSCSRLFETLQALKLNTTFV 187 ID S D EHDL MV DF+E G SSD +SG P S L + +Q LK + Sbjct: 18 IDSSHDGEHDLGLMVTDFLETGGGSGGAGSWCSSDSDSGFPDPSYLSDKIQYLKYSMAQH 77
Query: 188 EKEXXXXXXXXXXXXKDVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNSG 367 E E K+ DL + SGT C +CIR L K LR+ GYDAA+ S++W G Sbjct: 78 ETEVLSVVRTLMLTIKEKDLHSVKSGT-CNASCIRFYLAKLLRLSGYDAAVCSARWQGGG 136
Query: 368 KVPGGEYEYIDVLVKG-EKKPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVFIGSEE 544 KVPGG+ EYID+++ E +RLIVD+DF+S FEIAR SY ++SLPVV++G+ Sbjct: 137 KVPGGDNEYIDIILSDTEVGQDDRLIVDIDFRSHFEIARAVDSYQRIMESLPVVYVGTVA 196
Query: 545 KLRQILKVMAEAAKMSLKQNSMPLPPWRTLDYMLAKWWS 661 +L Q L+VM +AAK SLKQNSMPLPPWR+L+Y+ +KW S Sbjct: 197 RLNQFLQVMVDAAKFSLKQNSMPLPPWRSLNYLRSKWHS 235
>tr|A9T1S5|A9T1S5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_17250 PE=4 SV=1 Length = 186
Score = 189 bits (479), Expect = 2e-46 Identities = 84/143 (58%), Positives = 116/143 (81%) Frame = +2
Query: 233 KDVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNSGKVPGGEYEYIDVLVK 412 +D +L C T GT+CKG CI+R +VKHL+ GY+A++ S+W NSG+VPGGEYEYID++++ Sbjct: 39 EDTNLICDTIGTDCKGTCIKRYIVKHLKASGYNASVCKSEWANSGRVPGGEYEYIDIVLE 98
Query: 413 GEKKPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVFIGSEEKLRQILKVMAEAAKMS 592 G++ P +R ++D++FQ+QFEIARPT Y +ALK LP+VF+G+ L Q+L+ M+EAAK+S Sbjct: 99 GDQ-PVDRFLIDINFQTQFEIARPTAQYESALKCLPIVFVGTIPNLEQVLRHMSEAAKVS 157
Query: 593 LKQNSMPLPPWRTLDYMLAKWWS 661 L+QN M LPPWRTLDYM AKW S Sbjct: 158 LEQNDMHLPPWRTLDYMTAKWLS 180
>tr|A9SPM0|A9SPM0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_82229 PE=4 SV=1 Length = 442
Score = 182 bits (463), Expect = 1e-44 Identities = 103/220 (46%), Positives = 136/220 (61%), Gaps = 5/220 (2%) Frame = +2
Query: 17 DGSVDSEHDLAAMVHDFMENGSFESDFPESSDGESGLPSCSRLFETLQALKLNTTFVEKE 196 +G D++ DLAAMV DF+E+ + + +D ESGL S ++ LQ L +E E Sbjct: 99 NGDNDND-DLAAMVDDFIESSCYPVSH-DGNDSESGLSSSAKSPHALQTLTFIDEGIEAE 156
Query: 197 XXXXXXXXXXXXKDVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNSGKVP 376 L C GT+C+G CI+R++ L+ G+DAA+ SKW SG+V Sbjct: 157 LFNTVGKIILTIDVDTLICNAEGTDCRGGCIKRLVASQLQAAGFDAAVCKSKWKGSGQVL 216
Query: 377 GG-----EYEYIDVLVKGEKKPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVFIGSE 541 GG EYEYIDV V + E LIVDVDFQ QF +AR T +Y AALK LP+VF+GS Sbjct: 217 GGTVQMGEYEYIDVEVDCNQS-VEHLIVDVDFQDQFVLARATSNYLAALKLLPIVFVGST 275
Query: 542 EKLRQILKVMAEAAKMSLKQNSMPLPPWRTLDYMLAKWWS 661 ++L QIL +MAE K+SL++NSMPLPPWRTLD+M +KW S Sbjct: 276 KRLGQILHIMAEHVKLSLEKNSMPLPPWRTLDFMNSKWLS 315
>tr|A9RMP6|A9RMP6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_47173 PE=4 SV=1 Length = 127
Score = 181 bits (460), Expect = 3e-44 Identities = 88/127 (69%), Positives = 104/127 (81%) Frame = +2
Query: 275 KGACIRRMLVKHLRVWGYDAAIRSSKWHNSGKVPGGEYEYIDVLVKGEKKPAERLIVDVD 454 KG+C+ R +VKHLRV GYDAA SKWH SG++PGGEYEYIDV+V E++ ERLIVDVD Sbjct: 1 KGSCVNRFVVKHLRVAGYDAAECKSKWHCSGRIPGGEYEYIDVIVNDEQQ-TERLIVDVD 59
Query: 455 FQSQFEIARPTHSYAAALKSLPVVFIGSEEKLRQILKVMAEAAKMSLKQNSMPLPPWRTL 634 FQ+QFEIARPT Y AALK LP VF+GS KL+QIL+ M+EAAK SL+Q+ M LPPWRTL Sbjct: 60 FQAQFEIARPTQQYEAALKILPAVFVGSPTKLKQILEFMSEAAKASLQQSDMHLPPWRTL 119
Query: 635 DYMLAKW 655 DYM +KW Sbjct: 120 DYMRSKW 126
>tr|Q5JL24|Q5JL24_ORYSJ Putative uncharacterized protein P0459B04.1 (Os01g0973600 protein) (Putative uncharacterized protein P0698H10.25) OS=Oryza sativa subsp. japonica GN=P0459B04.1 PE=4 SV=1 Length = 337
Score = 175 bits (443), Expect = 3e-42 Identities = 99/214 (46%), Positives = 130/214 (60%), Gaps = 1/214 (0%) Frame = +2
Query: 23 SVDSEHDLAAMVHDFMENGSFE-SDFPESSDGESGLPSCSRLFETLQALKLNTTFVEKEX 199 S +SE DLA +V DF+ENG +D SSD +S L L + + K E E Sbjct: 60 SHESEMDLAMLVTDFLENGGTGGADSRASSDSDSALSD--HLADNISIYKQGGDEKENEL 117
Query: 200 XXXXXXXXXXXKDVDLFCLTSGTECKGACIRRMLVKHLRVWGYDAAIRSSKWHNSGKVPG 379 + DL G +C +CIR +LVK LR GYDAA+ SKW K+PG Sbjct: 118 LSMVHSLLFSIHESDLLAFKRG-QCSASCIRHLLVKLLRYSGYDAAVCVSKWQGFDKIPG 176
Query: 380 GEYEYIDVLVKGEKKPAERLIVDVDFQSQFEIARPTHSYAAALKSLPVVFIGSEEKLRQI 559 G++EYIDV++ + + RLI+D+DF+S FEIAR SY + L SLPVV++G+ +L+Q Sbjct: 177 GDHEYIDVIMNSDTE--YRLIIDIDFRSHFEIARAVDSYDSLLNSLPVVYVGTLPRLKQF 234
Query: 560 LKVMAEAAKMSLKQNSMPLPPWRTLDYMLAKWWS 661 L VM +AAK SLKQNSMPLPPWR+L Y+ AKW S Sbjct: 235 LHVMVDAAKWSLKQNSMPLPPWRSLPYLQAKWHS 268
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