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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951394
Clone id TST38A01NGRL0011_E18
Library
Length 658
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_E18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GAGCAAGGGAAAGTAGGATCCTCGGAGATTGTGAGTGCGGAGAGAGAGGGAAGGCAGGCA
TGGCAACGATGACCTCTGCGTCTGCCATCAGCAGCTCCACATTCGCTGGGCAGACTGCGT
TGAAGTCACAGAGCGAGCTGTCCAAGAGGGTTGGCAATGTGGATGCTCGCGTGACAATGA
GGAGGACAGTGAAGAGCACCCCAGAGAGCATCTGGTATGGCCCCGACCGCCCCAAGTACT
TGGGCCCCTTCTCTGAGGCTACCCCATCCTACCTGACCGGCGAGTTTCCGGGTGACTACG
GCTGGGACACGGCCGGTTTGTCTGCAGACCCAGAGACATTCTCCAAGAACAGGGAGCTCG
AGGTGATTCACGCGAGATGGGCAATGCTCGGCGCCCTGGGGTGTGTGACCCCCGAGTTGC
TAGCCAAGAACGGGGTGAAATTCGGAGAGGCAGTGTGGTTCAAGGCCGGCTCCCAGATCT
TCGCCGACGGCGGTCTTGACTACCTGGGCAACCCCAGCCTTGTGCACGCTCAGAGCATTC
TGGCCATCTGGGCCTGCCAAGTGGTTCTCATGGGTGCCGTTGAAGGCTACAGAGTGGGCG
GCGGCCCTCTTGGAGAGGGCCTAGACCCTGTCTACCCAGGCGGTGCCTTCGACCCCTT
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 182
Score (bit) 340.0
E-value 4.0e-93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951394|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_E18, 5'
         (658 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   340   4e-93
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   330   4e-90
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   329   9e-90
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   328   1e-89
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   328   2e-89
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   327   3e-89
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   326   6e-89
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   326   8e-89
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   326   8e-89
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   323   4e-88
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   312   1e-84
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   311   3e-84
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   307   4e-83
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   299   8e-81
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   298   2e-80
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   298   2e-80
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   296   5e-80
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   296   8e-80
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   296   8e-80
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   295   1e-79
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   295   1e-79
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   295   2e-79
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   294   2e-79
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   293   4e-79
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   293   4e-79
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   293   5e-79
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   293   5e-79
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   293   7e-79
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   293   7e-79
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   291   3e-78

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  340 bits (872), Expect = 4e-93
 Identities = 160/182 (87%), Positives = 169/182 (92%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 290
           QT LK Q+EL ++VG    RV+MRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 291 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 470
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAG 133

Query: 471 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 650
           SQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 SQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAF 193

Query: 651 DP 656
           DP
Sbjct: 194 DP 195


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  330 bits (846), Expect = 4e-90
 Identities = 155/183 (84%), Positives = 168/183 (91%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QTALK  +EL  ++G V   RV+MRRTVKS P SIWYGPDRPKYLGPFS+  PSYLTGEF
Sbjct: 14  QTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEF 73

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           GSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGA 193

Query: 648 FDP 656
           FDP
Sbjct: 194 FDP 196


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  329 bits (843), Expect = 9e-90
 Identities = 154/183 (84%), Positives = 168/183 (91%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNV-DARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           Q   KSQ+E  ++VGN  + R+TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           GSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 193

Query: 648 FDP 656
           FDP
Sbjct: 194 FDP 196


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  328 bits (842), Expect = 1e-89
 Identities = 152/183 (83%), Positives = 170/183 (92%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QTALKSQ+EL +++G+ +  R TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           GSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGA 193

Query: 648 FDP 656
           FDP
Sbjct: 194 FDP 196


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  328 bits (840), Expect = 2e-89
 Identities = 151/182 (82%), Positives = 169/182 (92%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 290
           QTALK + EL ++VG  D R +MRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTGEFP
Sbjct: 14  QTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFP 73

Query: 291 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 470
           GDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAG 133

Query: 471 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 650
           +QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAF 193

Query: 651 DP 656
           DP
Sbjct: 194 DP 195


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  327 bits (838), Expect = 3e-89
 Identities = 152/183 (83%), Positives = 167/183 (91%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALK-SQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEF 74

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTA +SADPETF+KNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWFKA
Sbjct: 75  PGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKA 134

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           G+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ PGGA
Sbjct: 135 GAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGA 194

Query: 648 FDP 656
           FDP
Sbjct: 195 FDP 197


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  326 bits (836), Expect = 6e-89
 Identities = 153/183 (83%), Positives = 168/183 (91%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QTALKSQ+EL +++G+    R TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKA 133

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           GSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 193

Query: 648 FDP 656
           FDP
Sbjct: 194 FDP 196


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  326 bits (835), Expect = 8e-89
 Identities = 151/176 (85%), Positives = 165/176 (93%)
 Frame = +3

Query: 129 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 308
           + EL +RVG+   R+TMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 309 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 488
           TAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 489 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDP 656
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD VYPGGAFDP
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDP 194


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  326 bits (835), Expect = 8e-89
 Identities = 151/176 (85%), Positives = 165/176 (93%)
 Frame = +3

Query: 129 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 308
           + EL +RVG+   R+TMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 309 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 488
           TAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 489 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDP 656
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD VYPGGAFDP
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDP 194


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  323 bits (829), Expect = 4e-88
 Identities = 153/183 (83%), Positives = 165/183 (90%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNV-DARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           +T L+  +E  ++ GN   AR TMRRTVKS PESIWYGPDRPKYLGPFSE  PSYLTGEF
Sbjct: 14  KTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEF 73

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF++NRELEVIH+RWAMLGALGC  PELL KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKA 133

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           GSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGA 193

Query: 648 FDP 656
           FDP
Sbjct: 194 FDP 196
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 183
Score (bit) 338.0
E-value 1.0e-91
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951394|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_E18, 5'
         (658 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   338   1e-91
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   337   4e-91
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   336   8e-91
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   335   1e-90
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   335   2e-90
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   333   4e-90
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   333   6e-90
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   333   7e-90
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   332   2e-89
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   331   2e-89
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   331   3e-89
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   330   4e-89
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   330   4e-89
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   330   4e-89
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   330   4e-89
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   330   5e-89
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   330   5e-89
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   330   5e-89
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   330   5e-89
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   330   5e-89
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   330   6e-89
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   329   8e-89
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   329   1e-88
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   328   2e-88
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   328   2e-88
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   327   5e-88
tr|B0L0Y2|B0L0Y2_9POAL Chloroplast chlorophyll a/b binding prote...   326   7e-88
tr|B6SZT9|B6SZT9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   325   1e-87
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O...   325   2e-87
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   325   2e-87

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  338 bits (868), Expect = 1e-91
 Identities = 157/183 (85%), Positives = 171/183 (93%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALK-SQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEF 74

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWFKA 134

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           G+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGA
Sbjct: 135 GAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGA 194

Query: 648 FDP 656
           FDP
Sbjct: 195 FDP 197


>tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll
           a/b-binding polypeptide (Fragment) OS=Pinus palustris
           GN=Lhcb2 PE=2 SV=1
          Length = 246

 Score =  337 bits (864), Expect = 4e-91
 Identities = 155/176 (88%), Positives = 168/176 (95%)
 Frame = +3

Query: 129 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 308
           Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 2   QNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 61

Query: 309 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 488
           TAGLSADPETF+KNRELEVIH+RWAMLGALGCV PELLAKNGVKFGEAVWFKAG+QIF++
Sbjct: 62  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSE 121

Query: 489 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDP 656
           GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDP
Sbjct: 122 GGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDP 177


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  336 bits (861), Expect = 8e-91
 Identities = 154/182 (84%), Positives = 170/182 (93%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 290
           +TALK Q+EL K+VG    R++M RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  RTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 291 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 470
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 133

Query: 471 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 650
           +QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGGAF 193

Query: 651 DP 656
           DP
Sbjct: 194 DP 195


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  335 bits (860), Expect = 1e-90
 Identities = 157/183 (85%), Positives = 171/183 (93%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QTALK  +EL ++VG +   R+TMRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           G+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGA 193

Query: 648 FDP 656
           FDP
Sbjct: 194 FDP 196


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  335 bits (858), Expect = 2e-90
 Identities = 156/182 (85%), Positives = 168/182 (92%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 290
           QTALK Q+EL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 291 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 470
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWFKAG 133

Query: 471 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 650
           +QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAF 193

Query: 651 DP 656
           DP
Sbjct: 194 DP 195


>tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII
           type I OS=Lilium longiflorum PE=2 SV=1
          Length = 264

 Score =  333 bits (855), Expect = 4e-90
 Identities = 155/182 (85%), Positives = 171/182 (93%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 290
           QTALK++ EL ++VG V  RV+MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPFSEQTPSYLTGEFP 73

Query: 291 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 470
           GDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCV PELL+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKNGVKFGEAVWFKAG 133

Query: 471 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 650
           +QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAF 193

Query: 651 DP 656
           DP
Sbjct: 194 DP 195


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  333 bits (854), Expect = 6e-90
 Identities = 153/182 (84%), Positives = 168/182 (92%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 290
           QT LK Q+EL ++VG    R +MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 291 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 470
           GDYGWDTAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 133

Query: 471 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 650
           SQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 SQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAF 193

Query: 651 DP 656
           DP
Sbjct: 194 DP 195


>tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding
           protein OS=Prunus persica GN=Lhcb-Pp2 PE=2 SV=1
          Length = 265

 Score =  333 bits (853), Expect = 7e-90
 Identities = 156/183 (85%), Positives = 171/183 (93%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QTALK  +EL +++G +   R+TMRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKQSNELIRKIGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF+KN ELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNGELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           GSQIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPLYPGGA 193

Query: 648 FDP 656
           FDP
Sbjct: 194 FDP 196


>tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 266

 Score =  332 bits (850), Expect = 2e-89
 Identities = 156/183 (85%), Positives = 170/183 (92%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKS-QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEF 74

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCV PELLAK GVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKA 134

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           G+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPGGA
Sbjct: 135 GAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGA 194

Query: 648 FDP 656
           FDP
Sbjct: 195 FDP 197


>tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 266

 Score =  331 bits (849), Expect = 2e-89
 Identities = 156/183 (85%), Positives = 169/183 (92%), Gaps = 1/183 (0%)
 Frame = +3

Query: 111 QTALKS-QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 287
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEF 74

Query: 288 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PELLAK GVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWFKA 134

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 647
           G+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPGGA
Sbjct: 135 GAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGA 194

Query: 648 FDP 656
           FDP
Sbjct: 195 FDP 197