DK951397
Clone id TST38A01NGRL0011_E21
Library
Length 690
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_E21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
GGCAAAGTTTTGTACTCAGAAAATTATTCCATGAATGCAAGAGCAAAACTTGACGAGCCA
TTGGTGATGAAGGCTTTACTTAATTTTCTGCAGTATGAACCTACTGGCTTTGCTAATATA
TGTACTCAAAGATTTTTACATGCTTCATCGTCAGATGCGAAAATAGGTGAGGATTACGAA
GTTTATGTTGCCGCTGGTTTGGGACGCTTTTTTGATGGAAAATGTCCTATCGACATGCTT
CCTGCATGTATCATGGCAACAAGCGAACAAATATCAAATGTATATAAAGAGAAGGCTGAT
TTGGTGGTATCCAAAGATCCTGTATTAGCTTGTCTCGTGAGAGATGTGACACCAGAGTAT
CGATTGCTTCATTGGCTTCAAGACATTGAGCATGATGGCTCATTTGCAACATATCTTCAC
ACAGGGCTTGACAACGATTGTGGGCCTGATTTGATATTTGTACTGTACATTGAGGCCATG
AAGAAATACATGCCTGTTTTGTGTCAAATGAAATCGGGTGAAGTTGATCAAATAGAAGCA
TTTATATCATTGGATGTGGCGAAAATGTATCAACATAACAGATCAAAGACTATTTTCAAG
AAGGATGATAGTGAAGGAGTGCAAAAACTGAAAGAGTGGTGCTCATCAGGGTACATTCAG
CTTCTCGTAACCACACCCATGGCAAATATG
■■Homology search results ■■ -
sp_hit_id P53963
Definition sp|P53963|YND4_YEAST Uncharacterized protein YNL034W OS=Saccharomyces cerevisiae
Align length 67
Score (bit) 33.1
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951397|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_E21, 5'
(690 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P53963|YND4_YEAST Uncharacterized protein YNL034W OS=Saccharo... 33 1.4
sp|Q7N2E0|LSRR_PHOLL Transcriptional regulator lsrR OS=Photorhab... 33 1.4
sp|P53976|YNB8_YEAST Uncharacterized protein YNL018C OS=Saccharo... 33 1.9
sp|Q11EU7|METE_MESSB 5-methyltetrahydropteroyltriglutamate--homo... 32 2.5
sp|Q4QR86|DEPD7_RAT DEP domain-containing protein 7 OS=Rattus no... 32 3.2
sp|Q91WS7|DEPD7_MOUSE DEP domain-containing protein 7 OS=Mus mus... 32 3.2
sp|P17268|H1_DROHY Histone H1 OS=Drosophila hydei GN=His1 PE=3 SV=2 31 5.5
sp|Q12276|YO227_YEAST Uncharacterized protein YOR227W OS=Sacchar... 31 7.1
sp|Q5R8B7|DEPD7_PONAB DEP domain-containing protein 7 OS=Pongo a... 31 7.1
sp|Q95JW3|DEPD7_MACFA DEP domain-containing protein 7 OS=Macaca ... 31 7.1
sp|Q96QD5|DEPD7_HUMAN DEP domain-containing protein 7 OS=Homo sa... 31 7.1
sp|Q1IFP3|SELA_PSEE4 L-seryl-tRNA(Sec) selenium transferase OS=P... 30 9.4
sp|P0C2S5|GUNS_CLOTM Endoglucanase SS OS=Clostridium thermocellu... 30 9.4
sp|A3DH67|GUNS_CLOTH Endoglucanase SS OS=Clostridium thermocellu... 30 9.4
sp|Q94516|AT5F1_DROME ATP synthase subunit b, mitochondrial OS=D... 30 9.4

>sp|P53963|YND4_YEAST Uncharacterized protein YNL034W
OS=Saccharomyces cerevisiae GN=YNL034W PE=4 SV=1
Length = 612

Score = 33.1 bits (74), Expect = 1.4
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = -3

Query: 469 CTVQISNQAHNRCQALCEDMLQMSHHA------QCLEANEAIDTLVSHLSRDKLIQDLWI 308
C V +S+ +HNR L ++Q ++ E NE++ +L S +S + W
Sbjct: 158 CNVMLSSSSHNRAM-LPPSLVQRNNATTSPTTDSASENNESVPSLTSSVSTSSSVYSSWN 216

Query: 307 PPNQPSL 287
PP+ P +
Sbjct: 217 PPHSPHI 223


>sp|Q7N2E0|LSRR_PHOLL Transcriptional regulator lsrR OS=Photorhabdus
luminescens subsp. laumondii GN=lsrR PE=2 SV=2
Length = 307

Score = 33.1 bits (74), Expect = 1.4
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Frame = +1

Query: 22 NYSMNARAKLDEPLVMKALLNFLQYEPTGFAN--ICTQRFLHASSSDAKIGEDYEVYVAA 195
N +++AR + ++ AL+ Q GF +C + L S +I V ++
Sbjct: 83 NMNLSARLGVGAAHLLMALIEPQQLLAVGFGETTMCALQHLSGFISSQQIRL---VTLSG 139

Query: 196 GLGRFF------DGKCPIDMLPACIMATSEQISNVYKEKADLVVSKDPVLACLVRDV 348
G+G + D C I+++PA + A++ Q++ +++++ + +D +LA D+
Sbjct: 140 GVGPYMTGIGQLDAACSINIIPAPLRASTAQVAETFRQESSV---RDVLLAACAADI 193


>sp|P53976|YNB8_YEAST Uncharacterized protein YNL018C
OS=Saccharomyces cerevisiae GN=YNL018C PE=4 SV=1
Length = 612

Score = 32.7 bits (73), Expect = 1.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -3

Query: 469 CTVQISNQAHNRCQALCEDMLQMSHHA------QCLEANEAIDTLVSHLSRDKLIQDLWI 308
C V S+ +HNR L ++Q ++ E NE++ +L S +S + W
Sbjct: 158 CNVMFSSSSHNRAM-LPSSLVQRNNATTSPTTDSASENNESVPSLTSSVSTSSSVYSSWN 216

Query: 307 PPNQPSL 287
PP+ P +
Sbjct: 217 PPHSPHI 223


>sp|Q11EU7|METE_MESSB
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Mesorhizobium sp. (strain BNC1)
GN=metE PE=3 SV=1
Length = 769

Score = 32.3 bits (72), Expect = 2.5
Identities = 25/99 (25%), Positives = 41/99 (41%)
Frame = +1

Query: 199 LGRFFDGKCPIDMLPACIMATSEQISNVYKEKADLVVSKDPVLACLVRDVTPEYRLLHWL 378
LG+ DG P+++LP + +E + + + AD V +P CLV D+T
Sbjct: 180 LGKRRDGGDPLELLPRLVPVYAELLGKLLRAGADWVQIDEP---CLVLDLT--------- 227

Query: 379 QDIEHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMP 495
E + T + L GP L+ Y + +P
Sbjct: 228 ---ERERRAFTIAYDALAATGGPKLMLATYFGGLGDNLP 263


>sp|Q4QR86|DEPD7_RAT DEP domain-containing protein 7 OS=Rattus
norvegicus GN=Depdc7 PE=2 SV=1
Length = 511

Score = 32.0 bits (71), Expect = 3.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3

Query: 403 MSHHAQCLEANEAIDTLVSHLSRDKLIQDLWIP 305
+ H C +EA+D + SHL+++K D+ IP
Sbjct: 59 LKRHNDCFVGSEAVDVIYSHLTQNKFFGDVDIP 91


>sp|Q91WS7|DEPD7_MOUSE DEP domain-containing protein 7 OS=Mus
musculus GN=Depdc7 PE=2 SV=1
Length = 511

Score = 32.0 bits (71), Expect = 3.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3

Query: 403 MSHHAQCLEANEAIDTLVSHLSRDKLIQDLWIP 305
+ H C +EA+D + SHL+++K D+ IP
Sbjct: 59 LKRHNDCFVGSEAVDVIYSHLTQNKFFGDVDIP 91


>sp|P17268|H1_DROHY Histone H1 OS=Drosophila hydei GN=His1 PE=3 SV=2
Length = 249

Score = 31.2 bits (69), Expect = 5.5
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = -2

Query: 215 SKKRPKPAAT*TS*SSPIFASDDEACKNL*VHILAKPVGSYCRKLSKAFITNGS 54
SKK PKP + S S A K + KP G +KLSKA +T S
Sbjct: 121 SKKEPKPKVSSVEKKSKKVTSSAAAAKKKTISATKKPKGVADKKLSKAVVTKKS 174


>sp|Q12276|YO227_YEAST Uncharacterized protein YOR227W
OS=Saccharomyces cerevisiae GN=YOR227W PE=1 SV=1
Length = 1246

Score = 30.8 bits (68), Expect = 7.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3

Query: 373 NEAIDTLVSHLSRDKLIQDLWIPPNQPSLYIHLI 272
N+ I + HL D+LI D+ IP N S+ HL+
Sbjct: 1027 NDGIRPSLKHLDSDRLINDVSIPENDSSIRPHLM 1060


>sp|Q5R8B7|DEPD7_PONAB DEP domain-containing protein 7 OS=Pongo
abelii GN=DEPDC7 PE=2 SV=1
Length = 511

Score = 30.8 bits (68), Expect = 7.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3

Query: 406 QMSHHAQCLEANEAIDTLVSHLSRDKLIQDLWIP 305
++ H C +EA+D + SHL ++K D+ IP
Sbjct: 58 RLKRHNDCFVGSEAVDVIFSHLIQNKYFGDVDIP 91


>sp|Q95JW3|DEPD7_MACFA DEP domain-containing protein 7 OS=Macaca
fascicularis GN=DEPDC7 PE=2 SV=1
Length = 502

Score = 30.8 bits (68), Expect = 7.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3

Query: 406 QMSHHAQCLEANEAIDTLVSHLSRDKLIQDLWIP 305
++ H C +EA+D + SHL ++K D+ IP
Sbjct: 49 RLKRHNDCFVGSEAVDVIFSHLIQNKYFGDVDIP 82


tr_hit_id Q034N6
Definition tr|Q034N6|Q034N6_LACC3 Polyphosphate kinase OS=Lactobacillus casei (strain ATCC 334)
Align length 105
Score (bit) 37.0
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951397|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_E21, 5'
(690 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q034N6|Q034N6_LACC3 Polyphosphate kinase OS=Lactobacillus cas... 37 1.2
tr|B3WAW4|B3WAW4_LACCB Polyphosphate kinase (Polyphosphoric acid... 37 1.2
tr|Q7P574|Q7P574_FUSNV NIF3-related protein OS=Fusobacterium nuc... 36 2.0
tr|A7QAM6|A7QAM6_VITVI Chromosome chr5 scaffold_72, whole genome... 36 2.0
tr|A5B3N6|A5B3N6_VITVI Putative uncharacterized protein OS=Vitis... 36 2.0
tr|Q1ZHP3|Q1ZHP3_9GAMM Putative glutamate-ammonia-ligase adenyly... 36 2.6
tr|A6T0A2|A6T0A2_JANMA dTDP-4-dehydrorhamnose reductase OS=Janth... 36 2.7
tr|B5QLX9|B5QLX9_LACRH Polyphosphate kinase OS=Lactobacillus rha... 36 2.7
tr|Q8RE15|Q8RE15_FUSNN NGG1-interacting factor 3 OS=Fusobacteriu... 35 3.5
tr|A5TTQ1|A5TTQ1_FUSNP NIF3 family protein OS=Fusobacterium nucl... 35 4.5
tr|Q69P46|Q69P46_ORYSJ Putative uncharacterized protein OJ1740_D... 35 5.9
tr|Q0J1P2|Q0J1P2_ORYSJ Os09g0423200 protein OS=Oryza sativa subs... 35 5.9
tr|A2Z1D0|A2Z1D0_ORYSI Putative uncharacterized protein OS=Oryza... 35 5.9
tr|Q0D6W8|Q0D6W8_ORYSJ Os07g0430200 protein OS=Oryza sativa subs... 34 7.7
tr|A5DNI8|A5DNI8_PICGU Putative uncharacterized protein OS=Pichi... 34 7.7

>tr|Q034N6|Q034N6_LACC3 Polyphosphate kinase OS=Lactobacillus casei
(strain ATCC 334) GN=LSEI_2616 PE=3 SV=1
Length = 720

Score = 37.0 bits (84), Expect = 1.2
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1

Query: 367 LHWLQDIEHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEVDQIEAFI 546
+HW Q++EH G Y GL C L+ E +K+YM M +G + + A +
Sbjct: 414 VHWAQELEHAGCHVIYGLVGLKTHCKLALVVRREEEGIKRYM----HMATGNYNDVTARL 469

Query: 547 SLDVAKMYQHNRSKTIFKKDDSEGVQKLKEWCSSGYIQLLVTTPM 681
D+ +N +D S L + Y LV P+
Sbjct: 470 YTDMGLFTCNNE----IGEDASNIFNMLSGFSEPPYFHKLVIAPL 510


>tr|B3WAW4|B3WAW4_LACCB Polyphosphate kinase (Polyphosphoric acid
kinase) (ATP-polyphosphate phosphotransferase)
OS=Lactobacillus casei (strain BL23) GN=ppk PE=4 SV=1
Length = 720

Score = 37.0 bits (84), Expect = 1.2
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1

Query: 367 LHWLQDIEHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEVDQIEAFI 546
+HW Q++EH G Y GL C L+ E +K+YM M +G + + A +
Sbjct: 414 VHWAQELEHAGCHVIYGLVGLKTHCKLALVVRREEEGIKRYM----HMATGNYNDVTARL 469

Query: 547 SLDVAKMYQHNRSKTIFKKDDSEGVQKLKEWCSSGYIQLLVTTPM 681
D+ +N +D S L + Y LV P+
Sbjct: 470 YTDMGLFTCNNE----IGEDASNIFNMLSGFSEPPYFHKLVIAPL 510


>tr|Q7P574|Q7P574_FUSNV NIF3-related protein OS=Fusobacterium
nucleatum subsp. vincentii ATCC 49256 GN=FNV0903 PE=3
SV=1
Length = 258

Score = 36.2 bits (82), Expect = 2.0
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +1

Query: 256 ATSEQISNVYKEKADLVVSKDPVLACLVRDVTPEYRLLHWLQDIEHDGSFATYLHTGLDN 435
AT E I N +K D++++ P++ +RD+T + L ++D+ + +HT LD+
Sbjct: 45 ATLEGIENAISKKVDMIITHHPIIFKAIRDITEQNILGKKIRDLIKNDINVYAIHTNLDS 104


>tr|A7QAM6|A7QAM6_VITVI Chromosome chr5 scaffold_72, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034611001
PE=4 SV=1
Length = 391

Score = 36.2 bits (82), Expect = 2.0
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = +1

Query: 217 GKCPIDMLPACIMATSEQISNVYKEKADLVVSKDPVLACLVRDVT--PEYR-LLHWLQDI 387
GKCP++ IS++ + A LA LV +V P++ LLH Q
Sbjct: 15 GKCPVNF---------SAISSILNKTAS---DCSLPLASLVGNVICCPQFSSLLHIFQGY 62

Query: 388 EHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEV 525
S L G+ NDC D+I +L +P +C +KS +
Sbjct: 63 YSTNSDKLVLQDGMANDCFSDIISILASRGANSTIPTICSVKSSNL 108


>tr|A5B3N6|A5B3N6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_030074 PE=4 SV=1
Length = 467

Score = 36.2 bits (82), Expect = 2.0
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = +1

Query: 217 GKCPIDMLPACIMATSEQISNVYKEKADLVVSKDPVLACLVRDVT--PEYR-LLHWLQDI 387
GKCP++ IS++ + A LA LV +V P++ LLH Q
Sbjct: 135 GKCPVNF---------SAISSILNKTAS---DCSLPLASLVGNVICCPQFSSLLHIFQGY 182

Query: 388 EHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEV 525
S L G+ NDC D+I +L +P +C +KS +
Sbjct: 183 YSTNSDKLVLQDGMANDCFSDIISILASRGANSTIPTICSVKSSNL 228


>tr|Q1ZHP3|Q1ZHP3_9GAMM Putative glutamate-ammonia-ligase
adenylyltransferase OS=Psychromonas sp. CNPT3
GN=PCNPT3_00690 PE=4 SV=1
Length = 954

Score = 35.8 bits (81), Expect = 2.6
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2

Query: 104 LALLIYVLKDFYMLHRQMRK*VRITKFMLPLVWDAFLMENVLSTCFLHVSWQQANKYQMY 283
L L+ +KD LHR +RK R + ML + W L ++ L+ F+H+S+ +
Sbjct: 75 LTHLLATVKDEVQLHRVLRKFRR--RHMLVIAWRELLQKSTLTESFMHLSYLA----EQL 128

Query: 284 IKRRLIWWYPKI 319
+++ L W Y K+
Sbjct: 129 LEQSLNWLYLKM 140


>tr|A6T0A2|A6T0A2_JANMA dTDP-4-dehydrorhamnose reductase
OS=Janthinobacterium sp. (strain Marseille)
(Minibacterium massiliensis) GN=rfbD2 PE=4 SV=1
Length = 284

Score = 35.8 bits (81), Expect = 2.7
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Frame = +1

Query: 151 SDAKIGEDYEVYVAAGLGRFFDGKCPIDMLPACIMATSEQISNVYKE-KADLVV------ 309
++ +GE + +A + RFF + ++P C + + ++ V+ E K D+V+
Sbjct: 21 NEKDVGEVFGTVRSANVARFFTPQIAQRLVPGCDVENQDALNKVFAEIKPDVVINCIGLI 80

Query: 310 -----SKDPVLACLVRDVTPE----------YRLLHWLQDIEHDGSFATYLHTGLDN 435
+ DP++A + + P RL+H D DG+ YL + + N
Sbjct: 81 KQLAEADDPLVALPINSLLPHRLAALCKLGGARLIHISTDCVFDGARGGYLESDVSN 137


>tr|B5QLX9|B5QLX9_LACRH Polyphosphate kinase OS=Lactobacillus
rhamnosus HN001 GN=LRH_11272 PE=4 SV=1
Length = 720

Score = 35.8 bits (81), Expect = 2.7
Identities = 26/105 (24%), Positives = 42/105 (40%)
Frame = +1

Query: 367 LHWLQDIEHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEVDQIEAFI 546
+HW Q++EH G Y GL C L+ + +K+YM M +G + + A +
Sbjct: 414 VHWAQELEHAGCHVIYGLVGLKTHCKLALVVRREEDGIKRYM----HMATGNYNDVTARL 469

Query: 547 SLDVAKMYQHNRSKTIFKKDDSEGVQKLKEWCSSGYIQLLVTTPM 681
D+ +N +D S L + Y LV P+
Sbjct: 470 YTDMGLFTCNNE----IGEDASNIFNMLSGFSEPPYFHKLVIAPL 510


>tr|Q8RE15|Q8RE15_FUSNN NGG1-interacting factor 3 OS=Fusobacterium
nucleatum subsp. nucleatum GN=FN1316 PE=3 SV=1
Length = 258

Score = 35.4 bits (80), Expect = 3.5
Identities = 27/126 (21%), Positives = 57/126 (45%)
Frame = +1

Query: 256 ATSEQISNVYKEKADLVVSKDPVLACLVRDVTPEYRLLHWLQDIEHDGSFATYLHTGLDN 435
AT E I N EK D++++ P++ ++D+T + L ++++ + +HT LD+
Sbjct: 45 ATLESIENAISEKVDMLITHHPIIFKAIKDITEQNILGKKIRNLIKNDINVYSIHTNLDS 104

Query: 436 DCGPDLIFVLYIEAMKKYMPVLCQMKSGEVDQIEAFISLDVAKMYQHNRSKTIFKKDDSE 615
IE + Y+ + ++ + + + ++++ N K + KK E
Sbjct: 105 S----------IEGLNDYVLKKIGISEYKILDFDEEKNCGIGRIFKLNEEKNL-KKFIEE 153

Query: 616 GVQKLK 633
KLK
Sbjct: 154 LKLKLK 159


>tr|A5TTQ1|A5TTQ1_FUSNP NIF3 family protein OS=Fusobacterium
nucleatum subsp. polymorphum ATCC 10953 GN=FNP_0467 PE=3
SV=1
Length = 258

Score = 35.0 bits (79), Expect = 4.5
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1

Query: 256 ATSEQISNVYKEKADLVVSKDPVLACLVRDVTPEYRLLHWLQDIEHDGSFATYLHTGLDN 435
AT E I N +K D++++ P++ ++D+T + L ++D+ + +HT LD+
Sbjct: 45 ATLESIENAISKKVDMLITHHPIIFKAIKDITEQNILGKKIRDLIKNDINVYAIHTNLDS 104