DK951397 |
Clone id |
TST38A01NGRL0011_E21 |
Library |
TST38 |
Length |
690 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_E21. 5' end sequence. |
Accession |
DK951397 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GGCAAAGTTTTGTACTCAGAAAATTATTCCATGAATGCAAGAGCAAAACTTGACGAGCCA TTGGTGATGAAGGCTTTACTTAATTTTCTGCAGTATGAACCTACTGGCTTTGCTAATATA TGTACTCAAAGATTTTTACATGCTTCATCGTCAGATGCGAAAATAGGTGAGGATTACGAA GTTTATGTTGCCGCTGGTTTGGGACGCTTTTTTGATGGAAAATGTCCTATCGACATGCTT CCTGCATGTATCATGGCAACAAGCGAACAAATATCAAATGTATATAAAGAGAAGGCTGAT TTGGTGGTATCCAAAGATCCTGTATTAGCTTGTCTCGTGAGAGATGTGACACCAGAGTAT CGATTGCTTCATTGGCTTCAAGACATTGAGCATGATGGCTCATTTGCAACATATCTTCAC ACAGGGCTTGACAACGATTGTGGGCCTGATTTGATATTTGTACTGTACATTGAGGCCATG AAGAAATACATGCCTGTTTTGTGTCAAATGAAATCGGGTGAAGTTGATCAAATAGAAGCA TTTATATCATTGGATGTGGCGAAAATGTATCAACATAACAGATCAAAGACTATTTTCAAG AAGGATGATAGTGAAGGAGTGCAAAAACTGAAAGAGTGGTGCTCATCAGGGTACATTCAG CTTCTCGTAACCACACCCATGGCAAATATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P53963 |
Definition |
sp|P53963|YND4_YEAST Uncharacterized protein YNL034W OS=Saccharomyces cerevisiae |
Align length |
67 |
Score (bit) |
33.1 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q034N6 |
Definition |
tr|Q034N6|Q034N6_LACC3 Polyphosphate kinase OS=Lactobacillus casei (strain ATCC 334) |
Align length |
105 |
Score (bit) |
37.0 |
E-value |
1.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951397|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_E21, 5' (690 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q034N6|Q034N6_LACC3 Polyphosphate kinase OS=Lactobacillus cas... 37 1.2 tr|B3WAW4|B3WAW4_LACCB Polyphosphate kinase (Polyphosphoric acid... 37 1.2 tr|Q7P574|Q7P574_FUSNV NIF3-related protein OS=Fusobacterium nuc... 36 2.0 tr|A7QAM6|A7QAM6_VITVI Chromosome chr5 scaffold_72, whole genome... 36 2.0 tr|A5B3N6|A5B3N6_VITVI Putative uncharacterized protein OS=Vitis... 36 2.0 tr|Q1ZHP3|Q1ZHP3_9GAMM Putative glutamate-ammonia-ligase adenyly... 36 2.6 tr|A6T0A2|A6T0A2_JANMA dTDP-4-dehydrorhamnose reductase OS=Janth... 36 2.7 tr|B5QLX9|B5QLX9_LACRH Polyphosphate kinase OS=Lactobacillus rha... 36 2.7 tr|Q8RE15|Q8RE15_FUSNN NGG1-interacting factor 3 OS=Fusobacteriu... 35 3.5 tr|A5TTQ1|A5TTQ1_FUSNP NIF3 family protein OS=Fusobacterium nucl... 35 4.5 tr|Q69P46|Q69P46_ORYSJ Putative uncharacterized protein OJ1740_D... 35 5.9 tr|Q0J1P2|Q0J1P2_ORYSJ Os09g0423200 protein OS=Oryza sativa subs... 35 5.9 tr|A2Z1D0|A2Z1D0_ORYSI Putative uncharacterized protein OS=Oryza... 35 5.9 tr|Q0D6W8|Q0D6W8_ORYSJ Os07g0430200 protein OS=Oryza sativa subs... 34 7.7 tr|A5DNI8|A5DNI8_PICGU Putative uncharacterized protein OS=Pichi... 34 7.7
>tr|Q034N6|Q034N6_LACC3 Polyphosphate kinase OS=Lactobacillus casei (strain ATCC 334) GN=LSEI_2616 PE=3 SV=1 Length = 720
Score = 37.0 bits (84), Expect = 1.2 Identities = 27/105 (25%), Positives = 42/105 (40%) Frame = +1
Query: 367 LHWLQDIEHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEVDQIEAFI 546 +HW Q++EH G Y GL C L+ E +K+YM M +G + + A + Sbjct: 414 VHWAQELEHAGCHVIYGLVGLKTHCKLALVVRREEEGIKRYM----HMATGNYNDVTARL 469
Query: 547 SLDVAKMYQHNRSKTIFKKDDSEGVQKLKEWCSSGYIQLLVTTPM 681 D+ +N +D S L + Y LV P+ Sbjct: 470 YTDMGLFTCNNE----IGEDASNIFNMLSGFSEPPYFHKLVIAPL 510
>tr|B3WAW4|B3WAW4_LACCB Polyphosphate kinase (Polyphosphoric acid kinase) (ATP-polyphosphate phosphotransferase) OS=Lactobacillus casei (strain BL23) GN=ppk PE=4 SV=1 Length = 720
Score = 37.0 bits (84), Expect = 1.2 Identities = 27/105 (25%), Positives = 42/105 (40%) Frame = +1
Query: 367 LHWLQDIEHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEVDQIEAFI 546 +HW Q++EH G Y GL C L+ E +K+YM M +G + + A + Sbjct: 414 VHWAQELEHAGCHVIYGLVGLKTHCKLALVVRREEEGIKRYM----HMATGNYNDVTARL 469
Query: 547 SLDVAKMYQHNRSKTIFKKDDSEGVQKLKEWCSSGYIQLLVTTPM 681 D+ +N +D S L + Y LV P+ Sbjct: 470 YTDMGLFTCNNE----IGEDASNIFNMLSGFSEPPYFHKLVIAPL 510
>tr|Q7P574|Q7P574_FUSNV NIF3-related protein OS=Fusobacterium nucleatum subsp. vincentii ATCC 49256 GN=FNV0903 PE=3 SV=1 Length = 258
Score = 36.2 bits (82), Expect = 2.0 Identities = 17/60 (28%), Positives = 33/60 (55%) Frame = +1
Query: 256 ATSEQISNVYKEKADLVVSKDPVLACLVRDVTPEYRLLHWLQDIEHDGSFATYLHTGLDN 435 AT E I N +K D++++ P++ +RD+T + L ++D+ + +HT LD+ Sbjct: 45 ATLEGIENAISKKVDMIITHHPIIFKAIRDITEQNILGKKIRDLIKNDINVYAIHTNLDS 104
>tr|A7QAM6|A7QAM6_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034611001 PE=4 SV=1 Length = 391
Score = 36.2 bits (82), Expect = 2.0 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 3/106 (2%) Frame = +1
Query: 217 GKCPIDMLPACIMATSEQISNVYKEKADLVVSKDPVLACLVRDVT--PEYR-LLHWLQDI 387 GKCP++ IS++ + A LA LV +V P++ LLH Q Sbjct: 15 GKCPVNF---------SAISSILNKTAS---DCSLPLASLVGNVICCPQFSSLLHIFQGY 62
Query: 388 EHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEV 525 S L G+ NDC D+I +L +P +C +KS + Sbjct: 63 YSTNSDKLVLQDGMANDCFSDIISILASRGANSTIPTICSVKSSNL 108
>tr|A5B3N6|A5B3N6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030074 PE=4 SV=1 Length = 467
Score = 36.2 bits (82), Expect = 2.0 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 3/106 (2%) Frame = +1
Query: 217 GKCPIDMLPACIMATSEQISNVYKEKADLVVSKDPVLACLVRDVT--PEYR-LLHWLQDI 387 GKCP++ IS++ + A LA LV +V P++ LLH Q Sbjct: 135 GKCPVNF---------SAISSILNKTAS---DCSLPLASLVGNVICCPQFSSLLHIFQGY 182
Query: 388 EHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEV 525 S L G+ NDC D+I +L +P +C +KS + Sbjct: 183 YSTNSDKLVLQDGMANDCFSDIISILASRGANSTIPTICSVKSSNL 228
>tr|Q1ZHP3|Q1ZHP3_9GAMM Putative glutamate-ammonia-ligase adenylyltransferase OS=Psychromonas sp. CNPT3 GN=PCNPT3_00690 PE=4 SV=1 Length = 954
Score = 35.8 bits (81), Expect = 2.6 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = +2
Query: 104 LALLIYVLKDFYMLHRQMRK*VRITKFMLPLVWDAFLMENVLSTCFLHVSWQQANKYQMY 283 L L+ +KD LHR +RK R + ML + W L ++ L+ F+H+S+ + Sbjct: 75 LTHLLATVKDEVQLHRVLRKFRR--RHMLVIAWRELLQKSTLTESFMHLSYLA----EQL 128
Query: 284 IKRRLIWWYPKI 319 +++ L W Y K+ Sbjct: 129 LEQSLNWLYLKM 140
>tr|A6T0A2|A6T0A2_JANMA dTDP-4-dehydrorhamnose reductase OS=Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) GN=rfbD2 PE=4 SV=1 Length = 284
Score = 35.8 bits (81), Expect = 2.7 Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 22/117 (18%) Frame = +1
Query: 151 SDAKIGEDYEVYVAAGLGRFFDGKCPIDMLPACIMATSEQISNVYKE-KADLVV------ 309 ++ +GE + +A + RFF + ++P C + + ++ V+ E K D+V+ Sbjct: 21 NEKDVGEVFGTVRSANVARFFTPQIAQRLVPGCDVENQDALNKVFAEIKPDVVINCIGLI 80
Query: 310 -----SKDPVLACLVRDVTPE----------YRLLHWLQDIEHDGSFATYLHTGLDN 435 + DP++A + + P RL+H D DG+ YL + + N Sbjct: 81 KQLAEADDPLVALPINSLLPHRLAALCKLGGARLIHISTDCVFDGARGGYLESDVSN 137
>tr|B5QLX9|B5QLX9_LACRH Polyphosphate kinase OS=Lactobacillus rhamnosus HN001 GN=LRH_11272 PE=4 SV=1 Length = 720
Score = 35.8 bits (81), Expect = 2.7 Identities = 26/105 (24%), Positives = 42/105 (40%) Frame = +1
Query: 367 LHWLQDIEHDGSFATYLHTGLDNDCGPDLIFVLYIEAMKKYMPVLCQMKSGEVDQIEAFI 546 +HW Q++EH G Y GL C L+ + +K+YM M +G + + A + Sbjct: 414 VHWAQELEHAGCHVIYGLVGLKTHCKLALVVRREEDGIKRYM----HMATGNYNDVTARL 469
Query: 547 SLDVAKMYQHNRSKTIFKKDDSEGVQKLKEWCSSGYIQLLVTTPM 681 D+ +N +D S L + Y LV P+ Sbjct: 470 YTDMGLFTCNNE----IGEDASNIFNMLSGFSEPPYFHKLVIAPL 510
>tr|Q8RE15|Q8RE15_FUSNN NGG1-interacting factor 3 OS=Fusobacterium nucleatum subsp. nucleatum GN=FN1316 PE=3 SV=1 Length = 258
Score = 35.4 bits (80), Expect = 3.5 Identities = 27/126 (21%), Positives = 57/126 (45%) Frame = +1
Query: 256 ATSEQISNVYKEKADLVVSKDPVLACLVRDVTPEYRLLHWLQDIEHDGSFATYLHTGLDN 435 AT E I N EK D++++ P++ ++D+T + L ++++ + +HT LD+ Sbjct: 45 ATLESIENAISEKVDMLITHHPIIFKAIKDITEQNILGKKIRNLIKNDINVYSIHTNLDS 104
Query: 436 DCGPDLIFVLYIEAMKKYMPVLCQMKSGEVDQIEAFISLDVAKMYQHNRSKTIFKKDDSE 615 IE + Y+ + ++ + + + ++++ N K + KK E Sbjct: 105 S----------IEGLNDYVLKKIGISEYKILDFDEEKNCGIGRIFKLNEEKNL-KKFIEE 153
Query: 616 GVQKLK 633 KLK Sbjct: 154 LKLKLK 159
>tr|A5TTQ1|A5TTQ1_FUSNP NIF3 family protein OS=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 GN=FNP_0467 PE=3 SV=1 Length = 258
Score = 35.0 bits (79), Expect = 4.5 Identities = 16/60 (26%), Positives = 33/60 (55%) Frame = +1
Query: 256 ATSEQISNVYKEKADLVVSKDPVLACLVRDVTPEYRLLHWLQDIEHDGSFATYLHTGLDN 435 AT E I N +K D++++ P++ ++D+T + L ++D+ + +HT LD+ Sbjct: 45 ATLESIENAISKKVDMLITHHPIIFKAIKDITEQNILGKKIRDLIKNDINVYAIHTNLDS 104
|