DK951404
Clone id TST38A01NGRL0011_F04
Library
Length 702
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_F04. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GGACAGAATCGAGAGAGAGAGAGACGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATATC
AGTAGGTAGCAAGTAAGCAAGCACAAGCAGACTGTGCCGAACGTGATGGAGAAGATAGGC
GAGATGCTGCACATGGGGGGTCATCGCAAAGAAGAAGAGCACCCAGCTCACCCACCACCG
CAATATGCAGGAGACTATGATCCTGGCCATCACGGTGGTGGTGGCGAGCATCATGGTGGG
GTGCCCCCCCATGTGGCCGCGGCCTCCTATGATCAGCATGAGCACCCGGGACAGATGCAT
GCAGGACCACCCCCTGTTCATGCAGGTTACGGTGGGCTGGAGCAGCAGCAGCACCACCAT
GGTGGGGCTCCACCTGCCCATGCCCATGAGCCGCCCCCACCCCACCATGAAGGCCCCATT
GAGAAGATGAAACACAAGATGAAGGGTGGCGACGATGACAGCAGCTCCAGCAGCAGCGAA
AGTGATGGGGAAGGAGGGCGCAGGAAGAAGAAACATGGCCTCTTCTAAGCAACTTGCTCC
TTGCTTGTTTTTGACATGATCTTGTGTTTGTATGTAATGTCGCTTTTCATCTCGGCTATA
TGAGATGGGTTCAAAATGTGGCTGCATATCGACCTACGTCATTTTCATTTCACTATATAT
GGTATTATGAATAAAAAAAATGGGCCTTGGCAGTCTAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9XJ56
Definition sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota
Align length 32
Score (bit) 31.6
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951404|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_F04, 5'
(702 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota GN=... 32 4.4
sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus mu... 31 5.6
sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta GN=HS... 31 7.4
sp|Q8BQ33|CO042_MOUSE Uncharacterized protein C15orf42 homolog O... 31 7.4

>sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota
GN=ECPP44 PE=1 SV=1
Length = 258

Score = 31.6 bits (70), Expect = 4.4
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1

Query: 106 MEKIGEMLHMGGHRKEEEHPAHPPPQYAGDYD 201
MEKI E L GG + EEE A PPP A D
Sbjct: 142 MEKIKEKLPGGGKKVEEETVAPPPPPAAAPVD 173


>sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus
musculus GN=Arhgap23 PE=2 SV=2
Length = 1483

Score = 31.2 bits (69), Expect = 5.6
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2

Query: 221 VASIMVGCPPM-WPRPPMISMSTRDRCMQDHPL 316
VA +VG PP PRPP + + RD C PL
Sbjct: 4 VAFCLVGIPPRPEPRPPQLPLGPRDGCSSGRPL 36


>sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta GN=HSV2
PE=3 SV=1
Length = 360

Score = 30.8 bits (68), Expect = 7.4
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3

Query: 586 KATLHT-NTRSCQKQARSKLLRRGHVSSSCALLPHHFRCCWS 464
K TLH N + Q S + R H+ S+ L+P +FR WS
Sbjct: 259 KNTLHVYNLTAADPQPESAMANRLHLLSAVPLMPTYFRSVWS 300


>sp|Q8BQ33|CO042_MOUSE Uncharacterized protein C15orf42 homolog OS=Mus
musculus PE=2 SV=2
Length = 1889

Score = 30.8 bits (68), Expect = 7.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3

Query: 93 CAERDGEDRRDAAHGGSSQRRRAPSSPTT 179
C DG+ R+DAA GS + A SSP T
Sbjct: 1515 CCTADGKQRQDAAQQGSPRASEATSSPQT 1543


tr_hit_id Q941N0
Definition tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
Align length 31
Score (bit) 41.2
E-value 0.066
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951404|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_F04, 5'
(702 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam ... 41 0.066
tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max P... 38 0.56
tr|Q6PNN7|Q6PNN7_9FABA Cold-induced protein OS=Ammopiptanthus mo... 37 1.6
tr|Q93XL8|Q93XL8_CITPA Dehydrin COR15 OS=Citrus paradisi PE=2 SV=1 34 8.0
tr|Q8W267|Q8W267_CARPA Maturation-associated SRC1-like protein O... 34 8.0

>tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
GN=DIP PE=4 SV=1
Length = 113

Score = 41.2 bits (95), Expect = 0.066
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1

Query: 103 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGD 195
++ KIGE LH+GGH+KEEEH +Y G+
Sbjct: 4 IINKIGETLHVGGHKKEEEHKGEVHGEYKGE 34


>tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max PE=4
SV=1
Length = 113

Score = 38.1 bits (87), Expect = 0.56
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1

Query: 103 VMEKIGEMLHMGGHRKEEEHPA-HPPPQYAGDY 198
++ KIG LH+GGH+KEEEH H +Y G++
Sbjct: 4 IIHKIGGTLHVGGHKKEEEHKGEHHAGEYKGEH 36


>tr|Q6PNN7|Q6PNN7_9FABA Cold-induced protein OS=Ammopiptanthus
mongolicus GN=Cip PE=2 SV=1
Length = 154

Score = 36.6 bits (83), Expect = 1.6
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1

Query: 103 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGD 195
++ KIGE LH+GG++KE+EH Y G+
Sbjct: 4 IINKIGETLHVGGNKKEDEHKVEGHGDYKGE 34


>tr|Q93XL8|Q93XL8_CITPA Dehydrin COR15 OS=Citrus paradisi PE=2 SV=1
Length = 137

Score = 34.3 bits (77), Expect = 8.0
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1

Query: 103 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 198
V+ KIGE LHMGG +KEE+ H ++GD+
Sbjct: 4 VIHKIGEALHMGGGQKEED--KHKAEHHSGDH 33


>tr|Q8W267|Q8W267_CARPA Maturation-associated SRC1-like protein
OS=Carica papaya GN=SRC PE=4 SV=1
Length = 93

Score = 34.3 bits (77), Expect = 8.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1

Query: 103 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 198
+M KI + LH+GG +KEEEH ++ G++
Sbjct: 4 IMHKIEDALHIGGRKKEEEHKGEHHGEHKGEH 35