| DK951407 |
| Clone id |
TST38A01NGRL0011_F07 |
| Library |
TST38 |
| Length |
557 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_F07. 5' end sequence. |
| Accession |
DK951407 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL694Contig1 |
| Sequence |
CAAGTTGGATTGGAGTCTTATCTAAGAAAGACAAATCCAAAGCGACCGATGGGTTGAATT CAAAAGTTCAGGAGGTCATGAGTAGCCCTCCCATAACCTTACCTGCAGACAAGACGGTAT CAGATGCTGCAATCTTGATGTTGAAGCACAAGATACATCGAATTCCTGTTGTCAATCATT CAAGACAAGTTGTTGGTATTGTCACCAGGACGGACATATTTAGCGCACTGGAGGGGAAAT CGTCTTCATGAGTGATGGGTGATTAAGCTGGGCTAAAGCAAGCAACAGAAACTCTGCGTA GTGTGATGGGATACATACTTTAGTCTTAGGTCGCATGCAAAGTCAGCTGGTTTACTAGAA TAAATTTGATGCGGTCTTGTGAGTGGAAGTGTGGCTTTTACTATTTTCAAGTTTTGTAAG ATTCATGTGTCGTGTTTAGTCATGTAAACACTTATGACTGTACTTGTATTGTGTGGACTT CCCTTGAGAGAAACTGATTAATGAGAAGCTTATTTTAAGGGTAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q58629 |
| Definition |
sp|Q58629|Y1232_METJA Uncharacterized protein MJ1232 OS=Methanocaldococcus jannaschii |
| Align length |
77 |
| Score (bit) |
62.0 |
| E-value |
2.0e-09 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951407|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_F07, 5' (522 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q58629|Y1232_METJA Uncharacterized protein MJ1232 OS=Methanoc... 62 2e-09 sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanoc... 55 2e-07 sp|Q57564|Y100_METJA Uncharacterized protein MJ0100 OS=Methanoca... 52 2e-06 sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=P... 50 5e-06 sp|Q58069|Y653_METJA Uncharacterized protein MJ0653 OS=Methanoca... 50 8e-06 sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=P... 49 1e-05 sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=P... 48 2e-05 sp|P56088|IMDH_HELPY Inosine-5'-monophosphate dehydrogenase OS=H... 47 5e-05 sp|Q9ZL14|IMDH_HELPJ Inosine-5'-monophosphate dehydrogenase OS=H... 47 5e-05 sp|Q58332|Y922_METJA Uncharacterized protein MJ0922 OS=Methanoca... 46 1e-04 sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopy... 45 2e-04 sp|Q8CMQ7|IMDH_STAES Inosine-5'-monophosphate dehydrogenase OS=S... 43 8e-04 sp|Q5HRX2|IMDH_STAEQ Inosine-5'-monophosphate dehydrogenase OS=S... 43 8e-04 sp|Q59011|IMDH_METJA Inosine-5'-monophosphate dehydrogenase OS=M... 43 8e-04 sp|P21879|IMDH_BACSU Inosine-5'-monophosphate dehydrogenase OS=B... 43 0.001 sp|Q9KGN8|IMDH_BACHD Inosine-5'-monophosphate dehydrogenase OS=B... 43 0.001 sp|O67820|IMDH_AQUAE Inosine-5'-monophosphate dehydrogenase OS=A... 42 0.002 sp|Q49UU8|IMDH_STAS1 Inosine-5'-monophosphate dehydrogenase OS=S... 41 0.003 sp|Q4L385|IMDH_STAHJ Inosine-5'-monophosphate dehydrogenase OS=S... 41 0.003 sp|Q58799|Y1404_METJA Uncharacterized protein MJ1404 OS=Methanoc... 41 0.004 sp|Q45460|OPUBA_BACSU Choline transport ATP-binding protein opuB... 41 0.004 sp|Q8NY70|IMDH_STAAW Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005 sp|Q6GC82|IMDH_STAAS Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005 sp|Q6GJQ7|IMDH_STAAR Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005 sp|P99106|IMDH_STAAN Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005 sp|P65169|IMDH_STAAM Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005 sp|Q5HIQ7|IMDH_STAAC Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005 sp|Q2YVL6|IMDH_STAAB Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005 sp|Q2G0Y7|IMDH_STAA8 Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005 sp|Q2FJM6|IMDH_STAA3 Inosine-5'-monophosphate dehydrogenase OS=S... 40 0.005
>sp|Q58629|Y1232_METJA Uncharacterized protein MJ1232 OS=Methanocaldococcus jannaschii GN=MJ1232 PE=4 SV=1 Length = 296
Score = 62.0 bits (149), Expect = 2e-09 Identities = 29/77 (37%), Positives = 50/77 (64%) Frame = +3
Query: 9 IGVLSKKDKSKATDGLNSKVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQ 188 +GV+S D ++ D ++ KV+EVM IT+ D+ + DA +M K+ + R+ +V+ + + Sbjct: 213 VGVISLHDIAENIDNIDKKVKEVMRRDVITIHKDEKIYDALKIMNKNNVGRLVIVDDNNK 272
Query: 189 VVGIVTRTDIFSALEGK 239 +VGI+TRTDI + GK Sbjct: 273 IVGIITRTDILKIISGK 289
>sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii GN=MJ1426 PE=4 SV=1 Length = 168
Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/61 (44%), Positives = 41/61 (67%) Frame = +3
Query: 48 DGLNSKVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDIFSA 227 + L +KV++VM+ I D T++DAA LM+K+ I R+PVV+ ++GIVTR D+ A Sbjct: 107 NALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLIEA 166
Query: 228 L 230 L Sbjct: 167 L 167
Score = 33.9 bits (76), Expect = 0.48 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +3
Query: 66 VQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDIFSAL 230 ++++M P I + D + D L K+KI PV+N ++VGI++ +DI + Sbjct: 17 IKDIMKKP-IVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKTI 70
>sp|Q57564|Y100_METJA Uncharacterized protein MJ0100 OS=Methanocaldococcus jannaschii GN=MJ0100 PE=4 SV=1 Length = 509
Score = 52.0 bits (123), Expect = 2e-06 Identities = 29/77 (37%), Positives = 43/77 (55%) Frame = +3
Query: 9 IGVLSKKDKSKATDGLNSKVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQ 188 +G+++ D +KA ++E+M+ IT D+ V AI M K+ I +PVV+ R+ Sbjct: 432 VGIITSWDIAKALAQNKKTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRR 491
Query: 189 VVGIVTRTDIFSALEGK 239 VVGIVT DI GK Sbjct: 492 VVGIVTSEDISRLFGGK 508
Score = 50.8 bits (120), Expect = 4e-06 Identities = 21/55 (38%), Positives = 40/55 (72%) Frame = +3
Query: 66 VQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDIFSAL 230 V++++S PPIT ++ ++ +AA +++KH I+ +P+V+ ++VGI+T DI AL Sbjct: 390 VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKAL 444
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus GN=guaB PE=3 SV=1 Length = 485
Score = 50.4 bits (119), Expect = 5e-06 Identities = 26/79 (32%), Positives = 53/79 (67%) Frame = +3
Query: 9 IGVLSKKDKSKATDGLNSKVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQ 188 +G+++KKD + A +G V+E+M+ IT+P V +A +M++++I R+PVVN + Sbjct: 136 VGIITKKDIA-AREGRT--VKELMTREVITVPESVDVEEALKIMMENRIDRLPVVNEDGK 192
Query: 189 VVGIVTRTDIFSALEGKSS 245 +VG++T +D+ + + K++ Sbjct: 193 LVGLITMSDLVARKKYKNA 211
Score = 40.8 bits (94), Expect = 0.004 Identities = 24/50 (48%), Positives = 33/50 (66%) Frame = +3
Query: 93 ITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDIFSALEGKS 242 IT+ D+T+ A LM KH I +PVV R VVGI+T+ DI +A EG++ Sbjct: 104 ITIAPDETIDYALFLMEKHGIDGLPVVEEDR-VVGIITKKDI-AAREGRT 151
>sp|Q58069|Y653_METJA Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii GN=MJ0653 PE=4 SV=1 Length = 194
Score = 49.7 bits (117), Expect = 8e-06 Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 5/75 (6%) Frame = +3
Query: 9 IGVLSKKDKSKATDGLNSK-----VQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVV 173 IG+++++D K N K +EVMS IT+P + ++++AA +M H I R+PVV Sbjct: 50 IGIVTERDIVKRVVSKNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVV 109
Query: 174 NHSRQVVGIVTRTDI 218 ++VGIVT++DI Sbjct: 110 KDG-ELVGIVTQSDI 123
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi GN=guaB PE=3 SV=1 Length = 485
Score = 49.3 bits (116), Expect = 1e-05 Identities = 24/79 (30%), Positives = 52/79 (65%) Frame = +3
Query: 9 IGVLSKKDKSKATDGLNSKVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQ 188 +G++SKKD + L V+E+M+ IT+P + V +A +M++++I R+PVV+ + Sbjct: 136 VGIISKKDIAAREGKL---VKELMTKDVITVPENIEVEEALKIMIENRIDRLPVVDKEGR 192
Query: 189 VVGIVTRTDIFSALEGKSS 245 ++G++T +D+ + + K++ Sbjct: 193 LIGLITMSDLVARKKYKNA 211
Score = 39.3 bits (90), Expect = 0.011 Identities = 24/59 (40%), Positives = 36/59 (61%) Frame = +3
Query: 63 KVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDIFSALEGK 239 K + + IT+ ++TV A LM KH I +PVV + + VVGI+++ DI +A EGK Sbjct: 94 KAERFIVEDVITISPEETVDFALFLMEKHDIDGLPVVENEK-VVGIISKKDI-AAREGK 150
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii GN=guaB PE=1 SV=1 Length = 486
Score = 48.1 bits (113), Expect = 2e-05 Identities = 24/79 (30%), Positives = 51/79 (64%) Frame = +3
Query: 9 IGVLSKKDKSKATDGLNSKVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQ 188 +G+++KKD + L V+E+M+ IT+P V +A +M++++I R+PVV+ + Sbjct: 136 VGIITKKDIAAREGKL---VKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGK 192
Query: 189 VVGIVTRTDIFSALEGKSS 245 +VG++T +D+ + + K++ Sbjct: 193 LVGLITMSDLVARKKYKNA 211
Score = 40.8 bits (94), Expect = 0.004 Identities = 25/59 (42%), Positives = 36/59 (61%) Frame = +3
Query: 63 KVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDIFSALEGK 239 + + ++ IT+ D+TV A LM KH I +PVV +VVGI+T+ DI +A EGK Sbjct: 94 RAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVV-EDEKVVGIITKKDI-AAREGK 150
>sp|P56088|IMDH_HELPY Inosine-5'-monophosphate dehydrogenase OS=Helicobacter pylori GN=guaB PE=3 SV=1 Length = 481
Score = 47.0 bits (110), Expect = 5e-05 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Frame = +3
Query: 9 IGVLSKKDKSKATDGLNSKVQEVMSSPP-ITLPADKTVSDAAILMLKHKIHRIPVVNHSR 185 IG+L+ +D TD L+ KV +VM+ P +T ++ +A+ LM KHKI ++P+V+ Sbjct: 130 IGILTNRDVRFETD-LSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDN 188
Query: 186 QVVGIVTRTDIFSALE 233 + G++T DI +E Sbjct: 189 VLKGLITIKDIQKRIE 204
Score = 35.8 bits (81), Expect = 0.13 Identities = 16/52 (30%), Positives = 32/52 (61%) Frame = +3
Query: 63 KVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDI 218 K + + + PI + A +T++DA ++ +KI +PVV+ ++GI+T D+ Sbjct: 87 KSESGVINDPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDV 138
>sp|Q9ZL14|IMDH_HELPJ Inosine-5'-monophosphate dehydrogenase OS=Helicobacter pylori J99 GN=guaB PE=3 SV=1 Length = 481
Score = 47.0 bits (110), Expect = 5e-05 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Frame = +3
Query: 9 IGVLSKKDKSKATDGLNSKVQEVMSSPP-ITLPADKTVSDAAILMLKHKIHRIPVVNHSR 185 IG+L+ +D TD L+ KV +VM+ P +T ++ +A+ LM KHKI ++P+V+ Sbjct: 130 IGILTNRDVRFETD-LSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDN 188
Query: 186 QVVGIVTRTDIFSALE 233 + G++T DI +E Sbjct: 189 VLKGLITIKDIQKRIE 204
Score = 35.8 bits (81), Expect = 0.13 Identities = 16/52 (30%), Positives = 32/52 (61%) Frame = +3
Query: 63 KVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDI 218 K + + + PI + A +T++DA ++ +KI +PVV+ ++GI+T D+ Sbjct: 87 KSESGVINDPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDV 138
>sp|Q58332|Y922_METJA Uncharacterized protein MJ0922 OS=Methanocaldococcus jannaschii GN=MJ0922 PE=1 SV=1 Length = 138
Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/54 (44%), Positives = 35/54 (64%) Frame = +3
Query: 57 NSKVQEVMSSPPITLPADKTVSDAAILMLKHKIHRIPVVNHSRQVVGIVTRTDI 218 N KV++VM+ IT + V +A MLK+KI +PV++ +V+GIVT TDI Sbjct: 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDI 60
Score = 29.6 bits (65), Expect = 9.0 Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 5/64 (7%) Frame = +3
Query: 54 LNSKVQEVMSSPPITLPADKTVSDAAILM-----LKHKIHRIPVVNHSRQVVGIVTRTDI 218 L + + +VM+ IT+ D ++ +A M + I+++PVV+ + ++VGI++ DI Sbjct: 71 LETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDI 130
Query: 219 FSAL 230 + Sbjct: 131 IRTI 134
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TIX8 |
| Definition |
tr|A9TIX8|A9TIX8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
79 |
| Score (bit) |
116.0 |
| E-value |
6.0e-25 |
| Report |
 |