DK951412 |
Clone id |
TST38A01NGRL0011_F12 |
Library |
TST38 |
Length |
353 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_F12. 5' end sequence. |
Accession |
DK951412 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL67Contig1 |
Sequence |
AAGCGAACTAGCATCCACGCTCTTGCACTCTCTGCACAGAGAACTGCAAGATCCCTCGCC ATGTATGCTGCTCGTAGGAAGATCCACAAGGAGAAGGGGCTGGAGCCTGATGATTTTGAG GAGTCCGTTGCTCAGGCTCTTTTCCATCTGGAGAACTCAAACCAGGAATTGAAGAGTGAC CTGAAAGACCTTTTCTTCAACTCTGCCAGGCAGGTTGATATTTCGAGAAGCCAGAAGGCT GTTGTCATCCACGTGCCTTACAGGCTCTGCAAATCCTTCCCAAAAATTCACTCTCGTCTT GTCCGGGAGTTGGAGAAGAAGTTCAACGTCAAGGATGTTATTATGATTGCCAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZNS1 |
Definition |
sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 OS=Avicennia marina |
Align length |
97 |
Score (bit) |
139.0 |
E-value |
6.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S5I8 |
Definition |
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
96 |
Score (bit) |
143.0 |
E-value |
4.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951412|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_F12, 5' (353 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella paten... 143 4e-33 tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 142 6e-33 tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella paten... 142 6e-33 tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea... 142 8e-33 tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subs... 140 2e-32 tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expre... 140 2e-32 tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella paten... 140 2e-32 tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza... 140 2e-32 tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza... 140 2e-32 tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 140 3e-32 tr|Q0DSN8|Q0DSN8_ORYSJ Os03g0297300 protein OS=Oryza sativa subs... 139 5e-32 tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 139 5e-32 tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 139 9e-32 tr|B7FMQ4|B7FMQ4_MEDTR Putative uncharacterized protein OS=Medic... 138 1e-31 tr|B8AX04|B8AX04_ORYSI Putative uncharacterized protein OS=Oryza... 137 2e-31 tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S rib... 137 3e-31 tr|B7FGT0|B7FGT0_MEDTR Putative uncharacterized protein OS=Medic... 137 3e-31 tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella paten... 137 3e-31 tr|B6TE31|B6TE31_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 137 3e-31 tr|A5AWN5|A5AWN5_VITVI Putative uncharacterized protein (Chromos... 136 6e-31 tr|Q5I7K2|Q5I7K2_WHEAT Ribosomal protein S7 OS=Triticum aestivum... 135 8e-31 tr|Q0DIZ8|Q0DIZ8_ORYSJ Os05g0346300 protein OS=Oryza sativa subs... 135 1e-30 tr|A5AFQ8|A5AFQ8_VITVI Putative uncharacterized protein (Chromos... 135 1e-30 tr|A9PBS2|A9PBS2_POPTR Putative uncharacterized protein OS=Popul... 131 2e-29 tr|Q2EHP5|Q2EHP5_POPCA Putative 40S ribosomal protein S7 (Fragme... 130 2e-29 tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleom... 130 4e-29 tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleom... 129 7e-29 tr|A9PEW2|A9PEW2_POPTR Putative uncharacterized protein OS=Popul... 129 7e-29 tr|A9PCT6|A9PCT6_POPTR Putative uncharacterized protein OS=Popul... 128 1e-28 tr|A9PBV3|A9PBV3_POPTR Putative uncharacterized protein OS=Popul... 127 3e-28
>tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208894 PE=4 SV=1 Length = 195
Score = 143 bits (361), Expect = 4e-33 Identities = 71/96 (73%), Positives = 86/96 (89%) Frame = +1
Query: 64 YAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKAV 243 + ARRKI KEKG EPD+FEESVAQALF LE++N ELKS+L+DLF NSA++VD+S ++KAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 VIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 VIHVPYRL K+F KIH+RLVRELEKKF+ KDVI+IA Sbjct: 63 VIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIA 98
>tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 142 bits (359), Expect = 6e-33 Identities = 70/97 (72%), Positives = 84/97 (86%) Frame = +1
Query: 61 MYAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKA 240 MY AR+KI KEKGLEP +FE+SVAQA F LEN NQELKSDLKDL+ N+A Q+D++ S+KA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSDLKDLYINNAIQMDVTGSRKA 60
Query: 241 VVIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 VVIHVPYRL K+F KIH RLVRELEKKF+ KDV+++A Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVIVA 97
>tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86905 PE=4 SV=1 Length = 195
Score = 142 bits (359), Expect = 6e-33 Identities = 69/96 (71%), Positives = 86/96 (89%) Frame = +1
Query: 64 YAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKAV 243 + ARRKI KEKG EPD+FEESVAQALF LE++N ELKS+L+DLF NSA++VD+S ++KAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 VIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 +IHVPYRL K+F KIH+RLVRELEKKF+ KDV++IA Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVVIA 98
>tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 142 bits (358), Expect = 8e-33 Identities = 72/97 (74%), Positives = 84/97 (86%) Frame = +1
Query: 61 MYAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKA 240 MY ARRKI KEK EP++FEESVAQALF LE++NQELKS+LKDLF NSA Q DIS ++KA Sbjct: 1 MYTARRKIQKEKNAEPNEFEESVAQALFDLESTNQELKSELKDLFINSASQYDISGNRKA 60
Query: 241 VVIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 VV+HVPYRL K+F KIH RLVRELEKKF+ KDV++IA Sbjct: 61 VVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVVIA 97
>tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subsp. japonica GN=Os03g0297100 PE=2 SV=1 Length = 192
Score = 140 bits (354), Expect = 2e-32 Identities = 69/97 (71%), Positives = 84/97 (86%) Frame = +1
Query: 61 MYAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKA 240 MY AR+KI KEKGLEP +FE+SVAQA F LEN NQELKS+LKDL+ N+A Q+DI+ ++KA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 241 VVIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 VVIHVPYRL K+F KIH RLVRELEKKF+ KDV+++A Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVA 97
>tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expressed (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os03g18580 PE=4 SV=1 Length = 192
Score = 140 bits (354), Expect = 2e-32 Identities = 69/97 (71%), Positives = 84/97 (86%) Frame = +1
Query: 61 MYAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKA 240 MY AR+KI KEKGLEP +FE+SVAQA F LEN NQELKS+LKDL+ N+A Q+DI+ ++KA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 241 VVIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 VVIHVPYRL K+F KIH RLVRELEKKF+ KDV+++A Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVA 97
>tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234408 PE=4 SV=1 Length = 195
Score = 140 bits (354), Expect = 2e-32 Identities = 68/96 (70%), Positives = 86/96 (89%) Frame = +1
Query: 64 YAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKAV 243 + ARRKI KEKG EPD+FEESVAQALF LE+++ ELKS+L+DLF NSA++VD+S ++KAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTSSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 VIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 +IHVPYRL K+F KIH+RLVRELEKKF+ KDV++IA Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVIIA 98
>tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11158 PE=4 SV=1 Length = 192
Score = 140 bits (354), Expect = 2e-32 Identities = 69/97 (71%), Positives = 84/97 (86%) Frame = +1
Query: 61 MYAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKA 240 MY AR+KI KEKGLEP +FE+SVAQA F LEN NQELKS+LKDL+ N+A Q+DI+ ++KA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 241 VVIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 VVIHVPYRL K+F KIH RLVRELEKKF+ KDV+++A Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVA 97
>tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11157 PE=4 SV=1 Length = 192
Score = 140 bits (354), Expect = 2e-32 Identities = 69/97 (71%), Positives = 84/97 (86%) Frame = +1
Query: 61 MYAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKA 240 MY AR+KI KEKGLEP +FE+SVAQA F LEN NQELKS+LKDL+ N+A Q+DI+ ++KA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 241 VVIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 VVIHVPYRL K+F KIH RLVRELEKKF+ KDV+++A Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVA 97
>tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 140 bits (353), Expect = 3e-32 Identities = 68/97 (70%), Positives = 83/97 (85%) Frame = +1
Query: 61 MYAARRKIHKEKGLEPDDFEESVAQALFHLENSNQELKSDLKDLFFNSARQVDISRSQKA 240 MY AR+KI K+KGLEP +FE+SVAQA F LEN NQELKSDLKDL+ N A Q+D++ S+KA Sbjct: 1 MYTARKKIQKDKGLEPSEFEDSVAQAFFDLENGNQELKSDLKDLYINGAIQLDVAGSRKA 60
Query: 241 VVIHVPYRLCKSFPKIHSRLVRELEKKFNVKDVIMIA 351 VVIHVPYRL K+F KIH R+VRELEKKF+ KDV+++A Sbjct: 61 VVIHVPYRLRKAFRKIHVRIVRELEKKFSGKDVVIVA 97
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