BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951413|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_F13, 5'
         (685 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase...    33   1.9  
sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18 OS=Schizosa...    32   4.1  
sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp....    30   9.2  

>sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase
           component HRD3 OS=Saccharomyces cerevisiae GN=HRD3 PE=1
           SV=1
          Length = 833

 Score = 32.7 bits (73), Expect = 1.9
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +1

Query: 502 TISPHLSVKRRLVYQRLFALQLGNSWLKSPMPRKWHVGFN--KQF-KNLFFYSDL 657
           T+ P  S K  L YQR  A QLGN   K  +  K++ GFN  + F K+L  Y D+
Sbjct: 165 TVIPQDSAKALLYYQR--AAQLGNLKAKQVLAYKYYSGFNVPRNFHKSLVLYRDI 217


>sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18
           OS=Schizosaccharomyces pombe GN=SPBC119.18 PE=2 SV=1
          Length = 69

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 586 SPMPRKWHVGFNKQFKNLFFYSDLHNREC 672
           +P  +K+   FN  + N F   DLHNR+C
Sbjct: 10  TPAKKKYDACFNDWYANKFLKGDLHNRDC 38


>sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1
          Length = 394

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 236 GPHEISSSFHELSGVGGFAKLASPSDRDYLGLRAGFLPSRDKPVSTHNL 382
           G    +S F + +G+GGFA L      ++ G   G+  SR  PV   +L
Sbjct: 74  GAAAAASGFQDFAGIGGFADLFESFFTNFAGGGVGYSRSRQGPVRGDDL 122

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951413|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_F13, 5'
         (685 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein OS=Crypt...    37   1.5  
tr|A2DI83|A2DI83_TRIVA Putative uncharacterized protein OS=Trich...    35   3.4  
tr|B4LPC7|B4LPC7_DROVI GJ20978 OS=Drosophila virilis GN=GJ20978 ...    34   9.9  

>tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein
            OS=Cryptosporidium muris RN66 GN=CMU_027500 PE=4 SV=1
          Length = 1841

 Score = 36.6 bits (83), Expect = 1.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 571  NSWLKSPMPRKWHVGFNKQFKNLFFYSDLHNREC 672
            N WL  P  + W VG+NK   N ++ S++ N +C
Sbjct: 1626 NGWLTHPCIKSWDVGYNKSLGNKYYNSEILNFDC 1659


>tr|A2DI83|A2DI83_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_129870 PE=4 SV=1
          Length = 507

 Score = 35.4 bits (80), Expect = 3.4
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = +1

Query: 43  FGRLVETQRLMQ--KQDNA*PISALLFFFFPQRNSSMTDKSI--ANRFQKVDMVDNWFLQ 210
           +G L  T++  +  + DN  P +++L  FFPQ  ++ +D +I  A R QK+DM+D  + Q
Sbjct: 121 YGHLELTKKFAEFIQNDNDIPFTSVLDEFFPQTKANKSDYAIKLAIRSQKMDMLDYIYNQ 180

Query: 211 CYKWLDNVRTTRNLF 255
            Y   D  +     F
Sbjct: 181 LYSDEDRQKADHLFF 195


>tr|B4LPC7|B4LPC7_DROVI GJ20978 OS=Drosophila virilis GN=GJ20978
           PE=4 SV=1
          Length = 300

 Score = 33.9 bits (76), Expect = 9.9
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = -3

Query: 155 LSVMLLFLCGKKKKSKAEIGHALSCFCMSRWVSTNLPKKRRRTCK 21
           L ++L+F+ G+  ++ A I + L   C  + VSTN PKK   TC+
Sbjct: 75  LIILLIFIYGEPDETDAVIFNELPRRCRFQHVSTNCPKKYCETCR 119