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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951418
Clone id TST38A01NGRL0011_F18
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_F18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GGCCGCACAACTTTGTACAAGAAACTTGGGTTTTTTTTTTTTTTTTTTTTTAAGCAGTGA
AGCCACCACTGGGAAGTTGTTTCAGTATGGCCATCTCCATAGCCGCTTCCTCGGCAGTTG
TCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTCTCAAGGCCA
CTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAAGGGCAGCCGTGTGA
GCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGC
CGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGA
CCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCG
GCTACTACAATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATG
CCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 133
Score (bit) 154.0
E-value 3.0e-37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951418|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_F18, 5'
         (484 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   154   3e-37
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   153   3e-37
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   152   1e-36
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   151   1e-36
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   151   2e-36
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   150   3e-36
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   149   5e-36
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   149   5e-36
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   149   5e-36
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   149   8e-36
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   149   8e-36
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   149   8e-36
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   149   8e-36
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   148   1e-35
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...   147   2e-35
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   147   2e-35
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   147   2e-35
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   147   2e-35
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   147   2e-35
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   147   3e-35
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   146   4e-35
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   146   4e-35
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   146   4e-35
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   146   4e-35
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   146   6e-35
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   145   7e-35
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   145   7e-35
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   145   7e-35
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai...   145   9e-35
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   145   9e-35

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  154 bits (388), Expect = 3e-37
 Identities = 71/133 (53%), Positives = 92/133 (69%), Gaps = 5/133 (3%)
 Frame = +3

Query: 99  LSKSFSGLKATTLF--APKSPNPLAI--SKGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 266
           L+  F+GLK+   F    K+ N  +   S G RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 267 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVL 443
            ++K++D+++R  W PC+EF+ + G VYREH H  GYY+GRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 444 REIAECAKEYPEA 482
           +E+ EC KEYP A
Sbjct: 142 KEVGECKKEYPNA 154


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  153 bits (387), Expect = 3e-37
 Identities = 69/124 (55%), Positives = 87/124 (70%)
 Frame = +3

Query: 108 SFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 287
           S +    T  FA  S  P   S G RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 288 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAECAK 467
           +++R GW PCIEF K+G VYRE+ +  GYY+GRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 468 EYPE 479
            YP+
Sbjct: 148 AYPD 151


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  152 bits (383), Expect = 1e-36
 Identities = 70/120 (58%), Positives = 85/120 (70%)
 Frame = +3

Query: 114 SGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 293
           +GLKA              + GSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 294 VRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAECAKEY 473
           ++ GW PCIEFD  G+V RE     GYY+GRYW MWKLPMFGC D+A+VLREI EC K Y
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  151 bits (382), Expect = 1e-36
 Identities = 70/127 (55%), Positives = 87/127 (68%), Gaps = 3/127 (2%)
 Frame = +3

Query: 111 FSGLKATTLF--APKSPNPLA-ISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 281
           F GLK+T     A +S   L  +S G R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 282 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAEC 461
           VD+++R GW PC+EF K+G VYRE+     YY+GRYW MWKLPMFGC DA  V +E+ E 
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEA 136

Query: 462 AKEYPEA 482
            K YP+A
Sbjct: 137 IKSYPDA 143


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  151 bits (381), Expect = 2e-36
 Identities = 71/128 (55%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
 Frame = +3

Query: 111 FSGLKATTLF-APKSPNPLAI--SKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 281
           F+GLK+   F   K  N  +   S G RV  M VW P   KK+ETLSYLPPL+  Q+AK+
Sbjct: 25  FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 282 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAE 458
           VD+++RK W PC+EF+ + G VYRE+    GYY+GRYW MWKLPMFGC D+A V++E+AE
Sbjct: 85  VDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAE 144

Query: 459 CAKEYPEA 482
           C KEYP+A
Sbjct: 145 CKKEYPQA 152


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  150 bits (379), Expect = 3e-36
 Identities = 70/130 (53%), Positives = 88/130 (67%), Gaps = 5/130 (3%)
 Frame = +3

Query: 108 SFSGLKATTLFAPKSPNPLAI----SKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 275
           SF+GLK+   F       L I    S G RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 276 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREI 452
           K+++++++KGW PC+EF+ + G VYREH    GYY+GRYW MWKLPMFGC DA  VL E+
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEV 144

Query: 453 AECAKEYPEA 482
            E  K YP+A
Sbjct: 145 QEAKKAYPQA 154


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  149 bits (377), Expect = 5e-36
 Identities = 71/132 (53%), Positives = 95/132 (71%), Gaps = 4/132 (3%)
 Frame = +3

Query: 99  LSKSFSGLKATTLF-APKSPNPLA--ISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 269
           L+  F+GLK++  F   K  N +    S GSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 270 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLR 446
           + K+V++++RKGW PC+EF+ + G V+R++    GYY+GRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 447 EIAECAKEYPEA 482
           E+AEC  EYPEA
Sbjct: 141 EVAECKAEYPEA 152


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  149 bits (377), Expect = 5e-36
 Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 4/127 (3%)
 Frame = +3

Query: 111 FSGLKATTLFAP--KSPNPLAI--SKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
           F+GL+++  F    K+ N L+   S G RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 279 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAE 458
           +VD+++R  W PCIEF K G VYRE+    GYY+GRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 459 CAKEYPE 479
             K YPE
Sbjct: 146 AKKAYPE 152


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  149 bits (377), Expect = 5e-36
 Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 4/127 (3%)
 Frame = +3

Query: 111 FSGLKATTLFAP--KSPNPLAI--SKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
           F+GL+++  F    K+ N L+   S G RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 279 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAE 458
           +VD+++R  W PCIEF K G VYRE+    GYY+GRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 459 CAKEYPE 479
             K YPE
Sbjct: 146 AKKAYPE 152


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  149 bits (375), Expect = 8e-36
 Identities = 67/127 (52%), Positives = 86/127 (67%), Gaps = 3/127 (2%)
 Frame = +3

Query: 111 FSGLKATT---LFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 281
           F GLK+T    +    + +  ++S G R+  M VW     KKFETLSYLPPLS+E + KQ
Sbjct: 16  FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75

Query: 282 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAEC 461
           VD+++R  W PC+EF K+G ++REH    GYY+GRYW MWKLPMFGC DA  VL E+ E 
Sbjct: 76  VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135

Query: 462 AKEYPEA 482
            KEYP+A
Sbjct: 136 KKEYPDA 142
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 128
Score (bit) 242.0
E-value 8.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951418|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_F18, 5'
         (484 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   242   8e-63
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   166   7e-40
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   162   6e-39
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   161   1e-38
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   161   1e-38
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   159   8e-38
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   155   9e-37
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   155   9e-37
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   154   2e-36
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   154   2e-36
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...   154   3e-36
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   152   6e-36
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   152   6e-36
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   152   8e-36
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   152   1e-35
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   151   1e-35
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   151   1e-35
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   151   2e-35
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   150   2e-35
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   150   3e-35
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   149   7e-35
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   149   7e-35
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   149   7e-35
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   149   7e-35

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  242 bits (617), Expect = 8e-63
 Identities = 110/128 (85%), Positives = 120/128 (93%)
 Frame = +3

Query: 99  LSKSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
           LSKSFSGLKA TLFAPK  NPLAIS GSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 279 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAE 458
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYY+GRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 459 CAKEYPEA 482
           CAKEYP A
Sbjct: 142 CAKEYPTA 149


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  166 bits (419), Expect = 7e-40
 Identities = 78/127 (61%), Positives = 93/127 (73%), Gaps = 3/127 (2%)
 Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
           K FSGLK+TTLFA K+    ++  GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYNGRYWVMWKLPMFGCQDAAAVLREIA 455
           DFM+++   PCIEFD +GSV R +F G   SGYY+GRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 456 ECAKEYP 476
           EC + +P
Sbjct: 147 ECKQSFP 153


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  162 bits (411), Expect = 6e-39
 Identities = 77/127 (60%), Positives = 92/127 (72%), Gaps = 3/127 (2%)
 Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
           K FSGLK+TTL A K+    ++  GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYNGRYWVMWKLPMFGCQDAAAVLREIA 455
           DFM+++   PCIEFD +GSV R +F G   SGYY+GRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 456 ECAKEYP 476
           EC + +P
Sbjct: 147 ECKQSFP 153


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  162 bits (409), Expect = 1e-38
 Identities = 75/127 (59%), Positives = 91/127 (71%), Gaps = 3/127 (2%)
 Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
           K+FSGLK+ TLF  KS    ++  GSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYNGRYWVMWKLPMFGCQDAAAVLREIA 455
           D+M+++   PCIEFD +G+V R +F G   SGYY+GRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 456 ECAKEYP 476
           EC   YP
Sbjct: 152 ECKTSYP 158


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  161 bits (408), Expect = 1e-38
 Identities = 74/127 (58%), Positives = 93/127 (73%), Gaps = 3/127 (2%)
 Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
           K+FSGLK+ TLF+ K+    ++  GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYNGRYWVMWKLPMFGCQDAAAVLREIA 455
           D+M+++   PCIEFD +GSV R +F G   SGYY+GRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 456 ECAKEYP 476
           EC  ++P
Sbjct: 182 ECKSQFP 188


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  161 bits (408), Expect = 1e-38
 Identities = 75/127 (59%), Positives = 92/127 (72%), Gaps = 3/127 (2%)
 Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
           K+FSGLK  TLF+ K+    A+  GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYNGRYWVMWKLPMFGCQDAAAVLREIA 455
           D+M+++   PCIEFD +GSV R +F G   SGYY+GRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 456 ECAKEYP 476
           EC  ++P
Sbjct: 152 ECKSQFP 158


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  159 bits (401), Expect = 8e-38
 Identities = 72/127 (56%), Positives = 93/127 (73%), Gaps = 3/127 (2%)
 Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
           K+FSGLK+ TLF+ ++    ++  GSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYNGRYWVMWKLPMFGCQDAAAVLREIA 455
           D+M+++   PCIEFD +GSV R +F G   SGYY+GRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 456 ECAKEYP 476
           EC  ++P
Sbjct: 151 ECKTQFP 157


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  155 bits (392), Expect = 9e-37
 Identities = 72/128 (56%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
 Frame = +3

Query: 111 FSGLKATTLF-APKSPNPLAI--SKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 281
           F+GLK+T  F   +  N +    S G RV  M VW P   KKFETLSYLP L+ EQ++K+
Sbjct: 28  FTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKE 87

Query: 282 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAE 458
           VD+++R GW PC+EF+ + G VYREH H  GYY+GRYW MWKLPMFGC D++ VL+E+ E
Sbjct: 88  VDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEE 147

Query: 459 CAKEYPEA 482
           C KEYP A
Sbjct: 148 CKKEYPNA 155


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  155 bits (392), Expect = 9e-37
 Identities = 70/124 (56%), Positives = 88/124 (70%)
 Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
           K+FSGLK+ T+F+ K+ N  ++  GSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAECA 464
           ++M+++   PC+EFD    V R +    GYY+GRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 465 KEYP 476
           K +P
Sbjct: 152 KTFP 155


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  155 bits (391), Expect = 1e-36
 Identities = 71/124 (57%), Positives = 88/124 (70%)
 Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISKGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
           K+FSGLK++TLF+ K+ +  ++  GSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYNGRYWVMWKLPMFGCQDAAAVLREIAECA 464
           D+M+++   PC+EFD    V R +    GYY+GRYW MWKLPMFGCQD A VLREI EC 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 465 KEYP 476
           K +P
Sbjct: 152 KTFP 155