DK951430 |
Clone id |
TST38A01NGRL0011_G06 |
Library |
TST38 |
Length |
670 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_G06. 5' end sequence. |
Accession |
DK951430 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL101Contig1 |
Sequence |
GTTTTGAAGCAGTTTGATCTAGACCAGGAATATGTTGGCAATGAGGAGGCTACAGGGGAG GACTATAACGTTGAGGAGGCTGGTGAACGCCGACCTTTCAGGGCCCTCCTTGATGTTGGC CTTGTGAGAACCACCACGGGGAACCGGGTTTTTGGAGCCTTGAAGGGTGCTTTAGATGGG GGTCTGGATGTTCCACATAGTGACAAGAGGTTTGCAGGGTATAGTAAAGAAGAGAAGTCA TTGAATGCAGATGCTCATAGGAGATATATTTTTGGAGGTCATGTGGCTGATTACATGAAG ATGCTGCGTGAGGATGAGCCCGAGAAGTACCAGCTTCAGTTCAGCTCTTTTATAAAGAAT GGGGTGGAGCCTGAAAGTTTGGAGGAAGTGTACAAGAGTGTACATGCTGCGATTAGGGCT GACCCTTCAATTAAGCACACTGAGAAGCATGTGCCAGCAGAGAGGAAGAGCTATAAAATG AAGAAGCTTACTTACGAGGAGAGGAAGGCTAACTTGATTGCTCGTCTCAATGCTATCAAT GAGGTTGAGGATGATGATTAGTTAAATTATTATTGAACCTGACCTGAGTTTTGGACCATT ATCTTTGCTTTGAGCTGAGCCTATCAAGGTGAAGACCTTGTTTTGTACGGTCAGTTTTGC AGTGTAGTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P49227 |
Definition |
sp|P49227|RL52_ARATH 60S ribosomal protein L5-2 OS=Arabidopsis thaliana |
Align length |
186 |
Score (bit) |
236.0 |
E-value |
6.0e-62 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKC3 |
Definition |
tr|A9NKC3|A9NKC3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
186 |
Score (bit) |
261.0 |
E-value |
3.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951430|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_G06, 5' (670 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKC3|A9NKC3_PICSI Putative uncharacterized protein OS=Picea... 261 3e-68 tr|A9SNA3|A9SNA3_PHYPA Predicted protein OS=Physcomitrella paten... 257 4e-67 tr|A9TXS7|A9TXS7_PHYPA Predicted protein OS=Physcomitrella paten... 256 1e-66 tr|A9S013|A9S013_PHYPA Predicted protein OS=Physcomitrella paten... 251 2e-65 tr|A9TYC5|A9TYC5_PHYPA Predicted protein OS=Physcomitrella paten... 250 6e-65 tr|A9PB43|A9PB43_POPTR Putative uncharacterized protein OS=Popul... 250 6e-65 tr|B7FJX5|B7FJX5_MEDTR Putative uncharacterized protein OS=Medic... 245 2e-63 tr|Q9AVH1|Q9AVH1_PEA Putative senescence-associated protein OS=P... 240 7e-62 tr|A7QAV5|A7QAV5_VITVI Chromosome chr5 scaffold_72, whole genome... 239 9e-62 tr|A9PFA8|A9PFA8_POPTR Putative uncharacterized protein OS=Popul... 239 1e-61 tr|B6TYP7|B6TYP7_MAIZE 60S ribosomal protein L5-1 OS=Zea mays PE... 238 2e-61 tr|A7R4R2|A7R4R2_VITVI Chromosome undetermined scaffold_763, who... 238 3e-61 tr|B8A7P9|B8A7P9_ORYSI Putative uncharacterized protein OS=Oryza... 234 3e-60 tr|B7EWY9|B7EWY9_ORYSJ 60S ribosomal protein L5 OS=Oryza sativa ... 234 3e-60 tr|B6THG9|B6THG9_MAIZE 60S ribosomal protein L5-1 OS=Zea mays PE... 234 3e-60 tr|A3A0I1|A3A0I1_ORYSJ Putative uncharacterized protein OS=Oryza... 234 3e-60 tr|Q0JGY2|Q0JGY2_ORYSJ Os01g0896700 protein (Putative uncharacte... 233 8e-60 tr|B8A7P8|B8A7P8_ORYSI Putative uncharacterized protein OS=Oryza... 233 8e-60 tr|B7SDE4|B7SDE4_ORYSJ 60S ribosomal protein L5 OS=Oryza sativa ... 233 8e-60 tr|Q38HU5|Q38HU5_SOLTU Putative uncharacterized protein OS=Solan... 228 3e-58 tr|A9PBZ9|A9PBZ9_POPTR Putative uncharacterized protein OS=Popul... 226 8e-58 tr|A9PH69|A9PH69_POPTR Putative uncharacterized protein OS=Popul... 226 1e-57 tr|A8WNL0|A8WNL0_CAEBR CBR-RPL-5 protein OS=Caenorhabditis brigg... 170 9e-41 tr|B4KFT7|B4KFT7_DROMO GI17484 OS=Drosophila mojavensis GN=GI174... 162 2e-38 tr|B2B802|B2B802_PODAN Predicted CDS Pa_2_12840 OS=Podospora ans... 160 7e-38 tr|Q7PL67|Q7PL67_DROME Ribosomal protein L5, isoform C (Fragment... 159 1e-37 tr|B4IT18|B4IT18_DROYA Yip6 OS=Drosophila yakuba GN=Dyak\yip6 PE... 159 1e-37 tr|B4IKU1|B4IKU1_DROSE GM26730 OS=Drosophila sechellia GN=GM2673... 159 1e-37 tr|B3NKK9|B3NKK9_DROER GG21448 (Fragment) OS=Drosophila erecta G... 159 1e-37 tr|A8E608|A8E608_XENLA LOC100126642 protein OS=Xenopus laevis GN... 158 3e-37
>tr|A9NKC3|A9NKC3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 261 bits (667), Expect = 3e-68 Identities = 127/186 (68%), Positives = 149/186 (80%) Frame = +1
Query: 1 VLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXX 180 VLKQ ++D+EYVGNEEA+GEDY+VE RRPFRALLDVGLVRTTTGNRVF Sbjct: 109 VLKQLEMDEEYVGNEEASGEDYSVEPNDARRPFRALLDVGLVRTTTGNRVFGALKGALDG 168
Query: 181 XXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKN 360 +PHSDKRFAGY+KE KSL+AD HR+YI GGHVA YMK LREDEPEKYQ QFS + K Sbjct: 169 GLDIPHSDKRFAGYNKESKSLDADLHRKYILGGHVAAYMKTLREDEPEKYQSQFSEYHKK 228
Query: 361 GVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAIN 540 G+EPE++EE+YK VHAAIRADP+IK++EKHVP +K Y +KLTYEERK LIARLNA+N Sbjct: 229 GIEPENIEELYKKVHAAIRADPTIKYSEKHVPKVQKHYLTRKLTYEERKNKLIARLNALN 288
Query: 541 EVEDDD 558 D++ Sbjct: 289 AGADEE 294
>tr|A9SNA3|A9SNA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_214065 PE=4 SV=1 Length = 293
Score = 257 bits (657), Expect = 4e-67 Identities = 124/184 (67%), Positives = 149/184 (80%) Frame = +1
Query: 4 LKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXX 183 LK F+LDQEYVGNE+ATGEDYNVEE +RPFRALLDVGLVRTTTGNRVF Sbjct: 110 LKNFELDQEYVGNEQATGEDYNVEEGEGKRPFRALLDVGLVRTTTGNRVFGALKGALDGG 169
Query: 184 XXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKNG 363 VPHS+KRFAGYSKE+KSLNA+ HR+YI GGH+ADYM++L+EDEPEKYQ FS FIK G Sbjct: 170 LDVPHSEKRFAGYSKEDKSLNAETHRKYILGGHIADYMRLLKEDEPEKYQSHFSGFIKAG 229
Query: 364 VEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAINE 543 VE ++L E+Y SVHAAIRADP+ + TEK PAE++ +K++KLTYEER+A L+ RLNA+N Sbjct: 230 VEADNLAEMYTSVHAAIRADPTQQKTEKKAPAEKRKWKIQKLTYEERQAALVKRLNAVNG 289
Query: 544 VEDD 555 D+ Sbjct: 290 DNDE 293
>tr|A9TXS7|A9TXS7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199314 PE=4 SV=1 Length = 293
Score = 256 bits (653), Expect = 1e-66 Identities = 124/184 (67%), Positives = 149/184 (80%) Frame = +1
Query: 4 LKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXX 183 LK +DLD EYVGNE+ATGEDYNVEE +RPFRALLDVGLVRTTTGNRVF Sbjct: 110 LKNYDLDDEYVGNEQATGEDYNVEEGEGKRPFRALLDVGLVRTTTGNRVFGALKGALDGG 169
Query: 184 XXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKNG 363 VPHS+KRFAGY+KE+KSLNA+ HR+YI GGHVADYMK+L+EDEPEKYQ FS FIK G Sbjct: 170 LDVPHSEKRFAGYNKEDKSLNAEIHRKYILGGHVADYMKLLKEDEPEKYQSHFSGFIKAG 229
Query: 364 VEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAINE 543 VE E+L E+Y SVHAAIRADP+ + TEK PAE++ +K++KLTY+ER+A L+ RLNAIN Sbjct: 230 VEAENLAEMYTSVHAAIRADPTQQKTEKKAPAEKRKWKIQKLTYDERQAALVKRLNAING 289
Query: 544 VEDD 555 +++ Sbjct: 290 EDEE 293
>tr|A9S013|A9S013_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_207358 PE=4 SV=1 Length = 293
Score = 251 bits (642), Expect = 2e-65 Identities = 122/184 (66%), Positives = 145/184 (78%) Frame = +1
Query: 4 LKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXX 183 LK F+LDQEYVGNE ATGEDYNVEE +RPFRALLDVGLVRTTTGNRVF Sbjct: 110 LKNFELDQEYVGNETATGEDYNVEEGEGKRPFRALLDVGLVRTTTGNRVFGALKGALDGG 169
Query: 184 XXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKNG 363 VPHS+KRFAGYSKE+KSLNA+ HR+YI GGHVADYM++L+EDEPEKYQ FS FIK G Sbjct: 170 LDVPHSEKRFAGYSKEDKSLNAEIHRKYILGGHVADYMRLLKEDEPEKYQSHFSGFIKEG 229
Query: 364 VEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAINE 543 +E + L ++Y VHAAIRADP+ + T K PAE++ +K++KLTYEER+A L+ RLNAIN Sbjct: 230 IEADDLADMYSKVHAAIRADPTSQKTAKKAPAEKRKWKIQKLTYEERQAALVKRLNAING 289
Query: 544 VEDD 555 D+ Sbjct: 290 DGDE 293
>tr|A9TYC5|A9TYC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226607 PE=4 SV=1 Length = 293
Score = 250 bits (638), Expect = 6e-65 Identities = 121/183 (66%), Positives = 144/183 (78%) Frame = +1
Query: 4 LKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXX 183 LK F+LDQEYVGNE ATGEDYNVEE +RPFRALLDVGLVRTTTGNRVF Sbjct: 110 LKNFELDQEYVGNETATGEDYNVEEGEGKRPFRALLDVGLVRTTTGNRVFGALKGALDGG 169
Query: 184 XXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKNG 363 VPHS+KRFAG+SKE+KSLNA+ HR+YI GGHVADYM++L+EDEPEKYQ F+ FIK G Sbjct: 170 LDVPHSEKRFAGFSKEDKSLNAETHRKYILGGHVADYMRLLKEDEPEKYQSHFNKFIKEG 229
Query: 364 VEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAINE 543 +E + L E+Y VHAAIRADP + TEK PAE++ +K++KLT+EER+A L+ RLNAIN Sbjct: 230 IEADELAEMYTKVHAAIRADPDQQKTEKKAPAEKRKWKIQKLTFEERQAALVQRLNAINA 289
Query: 544 VED 552 D Sbjct: 290 EGD 292
>tr|A9PB43|A9PB43_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 298
Score = 250 bits (638), Expect = 6e-65 Identities = 118/186 (63%), Positives = 144/186 (77%) Frame = +1
Query: 1 VLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXX 180 VLK+ ++D+EY GN EATGEDY+VE A RRPFRALLDVGLVRTTTGNRVF Sbjct: 109 VLKKLEMDEEYEGNVEATGEDYSVEPADSRRPFRALLDVGLVRTTTGNRVFGALKGALDG 168
Query: 181 XXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKN 360 +PHSDKRFAG++K+ K L+A+ HR+YI+GGHVA YM+ L EDEPEKYQ FS +IK Sbjct: 169 GLDIPHSDKRFAGFNKDGKQLDAEVHRKYIYGGHVAAYMRNLMEDEPEKYQSHFSEYIKR 228
Query: 361 GVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAIN 540 G+EP+++EE+YK VHAAIRADP+ K +EK +P E K Y +KKLTYEERKA L+ RL A+N Sbjct: 229 GIEPDNMEELYKKVHAAIRADPTAKKSEKQLPKEHKRYNLKKLTYEERKAKLVERLKALN 288
Query: 541 EVEDDD 558 DDD Sbjct: 289 SAADDD 294
>tr|B7FJX5|B7FJX5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 245 bits (626), Expect = 2e-63 Identities = 118/186 (63%), Positives = 142/186 (76%) Frame = +1
Query: 1 VLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXX 180 VLK ++D+EY GN EATGEDY+VE A RRPFRALLDVGLV+TTTGNRVF Sbjct: 109 VLKTLEMDEEYEGNVEATGEDYSVEPAESRRPFRALLDVGLVKTTTGNRVFGALKGALDG 168
Query: 181 XXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKN 360 +PHSDKRFAG+ KE+K L+A+ HR+YIFGGHV+ YMK L EDEPEKYQ FS +IK Sbjct: 169 GLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVSAYMKTLIEDEPEKYQTHFSEYIKK 228
Query: 361 GVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAIN 540 G+E + LEE+YK VHAAIRADP+IK +EK P + K Y +KKLTYEERKA L++RL A+N Sbjct: 229 GIEADGLEELYKKVHAAIRADPTIKKSEKQPPKQHKRYNLKKLTYEERKAKLVSRLAALN 288
Query: 541 EVEDDD 558 DD+ Sbjct: 289 AAVDDE 294
>tr|Q9AVH1|Q9AVH1_PEA Putative senescence-associated protein OS=Pisum sativum GN=ssa-15 PE=2 SV=1 Length = 279
Score = 240 bits (612), Expect = 7e-62 Identities = 115/186 (61%), Positives = 138/186 (74%) Frame = +1
Query: 1 VLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXX 180 VLK ++D+EY GN EA+GEDY+VE A RRPFRALLDVGLV+TTTGNRVF Sbjct: 89 VLKTLEMDEEYEGNVEASGEDYSVEPADSRRPFRALLDVGLVKTTTGNRVFGALKGALDG 148
Query: 181 XXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKN 360 +PHSDKRFAG+ KE+K L+A+ HR+YIFGGHV YMK L EDEPEKYQ FS +IK Sbjct: 149 GLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKK 208
Query: 361 GVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAIN 540 G+E + +EE+YK VHAAIRADP+ K EK P E K Y +KKLTY+ER+ LIARL A+N Sbjct: 209 GIEADGIEELYKKVHAAIRADPANKKAEKQPPKEHKRYNLKKLTYDERRTKLIARLEALN 268
Query: 541 EVEDDD 558 D+D Sbjct: 269 SAVDED 274
>tr|A7QAV5|A7QAV5_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034699001 PE=4 SV=1 Length = 307
Score = 239 bits (611), Expect = 9e-62 Identities = 118/186 (63%), Positives = 136/186 (73%) Frame = +1
Query: 1 VLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXX 180 VLK ++D EY GN EATGEDY+VE RRPFRALLDVGLVRTTTGNRVF Sbjct: 115 VLKMLEMDGEYEGNVEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDG 174
Query: 181 XXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKN 360 +PHSDKRFAG+SK+ K L+A+ HR+YI+GGHV+ YM L EDEPEKYQ FS +IK Sbjct: 175 GLDIPHSDKRFAGFSKDSKQLDAEVHRKYIYGGHVSAYMGTLIEDEPEKYQSHFSEYIKK 234
Query: 361 GVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAIN 540 GVEP+ +EE+YK VHAAIRA+P K EK P E K Y +KKLTYEERKA LI RLNA+N Sbjct: 235 GVEPDDIEEMYKKVHAAIRANPIQKKVEKQPPKEHKRYNLKKLTYEERKAKLIERLNALN 294
Query: 541 EVEDDD 558 DD Sbjct: 295 SAAADD 300
>tr|A9PFA8|A9PFA8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 297
Score = 239 bits (610), Expect = 1e-61 Identities = 112/186 (60%), Positives = 139/186 (74%) Frame = +1
Query: 1 VLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXX 180 VLK ++D EY GN EATGED++VE A RRPFRALLDVGL+RTTTGNRVF Sbjct: 109 VLKMLEMDDEYEGNVEATGEDFSVEPADSRRPFRALLDVGLLRTTTGNRVFGALKGALDG 168
Query: 181 XXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFSSFIKN 360 +PHSDKRFAG++K+ K L+A+ HR+YI+GGHVA YM+ L EDEPEKYQ FS ++K Sbjct: 169 GLDIPHSDKRFAGFAKDNKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFSEYLKR 228
Query: 361 GVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIARLNAIN 540 G++ + +E +YK VHAAIRADP+ K +EK P E K Y +KKLTYEERKA L+ RLNA+N Sbjct: 229 GIDADGMEALYKKVHAAIRADPTAKKSEKQPPKEHKRYNLKKLTYEERKAKLVERLNALN 288
Query: 541 EVEDDD 558 DD+ Sbjct: 289 SAADDE 294
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