DK951436
Clone id TST38A01NGRL0011_G12
Library
Length 654
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_G12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
CTAGCTGCAAGCGAGGAAAATACTGAGAAGCGTCCTGAAGAGCTTATTAGAAGGGGCTCA
CTGGATGAGGGTGCCGGTGACAGTGTACCGGCTGTTGTGAAAGGACATCCGATGATGGCC
GCGTGGCAAGGGCAGCCTCATAACCAATTTATGCCTGGTGTCCCTCCATATGCAGCAATG
CATCCTGGTATGCCTAATCACTATGATCCCTCATTTGGGTTTACTGGATCAGTCCGACCA
GGGCTGTCGTATCCCCCTTATTTAGGAAGCCCATATATGCCTGCACCTTATCCTGATGGC
AATGGGTGGCAGCCACACTCTCCTCTTCCCCCACAGTATTGGCCTGGAAATCAATCAAGT
GATCCAATAGATGGGGTTTATCATCGATCACCTCATCAGCAAAGCATTTCCACACCTTCC
TCCAGAGAAAAAGAAGTACATGAATCAAACAGATACGATGCTGATAATATGCAAGATGAT
GGAGAGGATTACTCAAATGATCTTTCTACTGATTCATCAAGGAGGTCTGCCAGACGATCT
GCCTCACCTAGAAGGAGGTCTGCTTCACCTATGAGAAGAGTCCAGATTGGGCGCACAGGG
GGGTCGAAGCGCTCCGGAATGGTTGTTATCCGAAACATCAATTATATTGCTCCA
■■Homology search results ■■ -
sp_hit_id Q32L53
Definition sp|Q32L53|GRINA_BOVIN Glutamate [NMDA] receptor-associated protein 1 OS=Bos taurus
Align length 127
Score (bit) 45.1
E-value 0.0003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951436|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_G12, 5'
(654 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q32L53|GRINA_BOVIN Glutamate [NMDA] receptor-associated prote... 45 3e-04
sp|P35085|CBPP_DICDI Calcium-binding protein P OS=Dictyostelium ... 45 4e-04
sp|Q02926|RB97D_DROME Ribonucleoprotein RB97D OS=Drosophila mela... 41 0.006
sp|Q27409|FP1_MYTGA Adhesive plaque matrix protein OS=Mytilus ga... 41 0.006
sp|Q5AZM3|SEC31_EMENI Protein transport protein sec31 OS=Emerice... 40 0.008
sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1... 40 0.008
sp|P97496|SMRC1_MOUSE SWI/SNF complex subunit SMARCC1 OS=Mus mus... 40 0.011
sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sa... 40 0.014
sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1... 40 0.014
sp|P24639|ANXA7_DICDI Annexin A7 OS=Dictyostelium discoideum GN=... 40 0.014
sp|P28702|RXRB_HUMAN Retinoic acid receptor RXR-beta OS=Homo sap... 39 0.024
sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila me... 39 0.024
sp|Q5B3C8|NST1_EMENI Stress response protein nst1 OS=Emericella ... 39 0.024
sp|Q5U1W2|PRR13_RAT Proline-rich protein 13 OS=Rattus norvegicus... 39 0.031
sp|Q8R105|VP37C_MOUSE Vacuolar protein sorting-associated protei... 38 0.041
sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1... 38 0.041
sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1... 38 0.041
sp|Q7Z429|GRINA_HUMAN Glutamate [NMDA] receptor-associated prote... 38 0.041
sp|Q7TN99|CPEB3_MOUSE Cytoplasmic polyadenylation element-bindin... 38 0.041
sp|P04474|PRP3_RAT Acidic proline-rich protein PRP33 OS=Rattus n... 38 0.054
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 38 0.054
sp|Q8NE35|CPEB3_HUMAN Cytoplasmic polyadenylation element-bindin... 38 0.054
sp|Q6I5Y0|CDKC1_ORYSJ Cyclin-dependent kinase C-1 OS=Oryza sativ... 38 0.054
sp|Q4WP03|VID21_ASPFU Chromatin modification-related protein vid... 37 0.070
sp|Q80WC3|TNC18_MOUSE Trinucleotide repeat-containing gene 18 pr... 37 0.070
sp|Q9Y2V3|RX_HUMAN Retinal homeobox protein Rx OS=Homo sapiens G... 37 0.070
sp|Q9CQJ5|PRR13_MOUSE Proline-rich protein 13 OS=Mus musculus GN... 37 0.070
sp|Q8N2S1|LTBP4_HUMAN Latent-transforming growth factor beta-bin... 37 0.070
sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment) OS... 37 0.070
sp|P53992|SC24C_HUMAN Protein transport protein Sec24C OS=Homo s... 37 0.091

>sp|Q32L53|GRINA_BOVIN Glutamate [NMDA] receptor-associated protein
1 OS=Bos taurus GN=GRINA PE=2 SV=1
Length = 366

Score = 45.1 bits (105), Expect = 3e-04
Identities = 41/127 (32%), Positives = 49/127 (38%), Gaps = 23/127 (18%)
Frame = +1

Query: 73 AGDSVPAVVKGHP-----MMAAWQGQPHNQF--------MPGVPPYAAMHP--GMPNHYD 207
+GDS P G+P MA + G P+ Q PG P + +P G P
Sbjct: 10 SGDSYPPPNPGYPGGPQPSMAPYPGAPYPQAPFQPSPYGQPGYPQGPSPYPQGGYPQGPY 69

Query: 208 PSFGFTGSVRPGLSYPP--YLGSPYMPAPYPDGNGWQPHSPLP------PQYWPGNQSSD 363
P G+ P YPP Y PY P YP G P SP P PQ +P
Sbjct: 70 PPGGY-----PQGPYPPGGYPQGPYPPGGYPQGP--YPQSPFPPNPYGQPQAFPAQDPGS 122

Query: 364 PIDGVYH 384
P G YH
Sbjct: 123 PHHGNYH 129



Score = 36.6 bits (83), Expect = 0.12
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 22/93 (23%)
Frame = +1

Query: 208 PSFGFTGSVRPGLSYPPYLGSPYMPAP----------YPDG-----NGWQPHSPLPP--- 333
P+ G+ G +P ++ PY G+PY AP YP G G P P PP
Sbjct: 17 PNPGYPGGPQPSMA--PYPGAPYPQAPFQPSPYGQPGYPQGPSPYPQGGYPQGPYPPGGY 74

Query: 334 ---QYWPGNQSSDPI-DGVYHRSPHQQSISTPS 420
Y PG P G Y + P+ QS P+
Sbjct: 75 PQGPYPPGGYPQGPYPPGGYPQGPYPQSPFPPN 107


>sp|P35085|CBPP_DICDI Calcium-binding protein P OS=Dictyostelium
discoideum GN=cbpP PE=2 SV=2
Length = 467

Score = 44.7 bits (104), Expect = 4e-04
Identities = 35/104 (33%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Frame = +1

Query: 103 GHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMP 282
G+P Q + PG P Y PG P Y P G +PG YPP P P
Sbjct: 104 GYPPQQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQG-----QPG-QYPPQ--QPGQP 155

Query: 283 APYPDGNGWQ--PHSPLPPQYWPGNQSSDPIDGVYHRSPHQQSI 408
YP Q P P P +P QS P G Y P QQ +
Sbjct: 156 GQYPPQQQGQYPPQQPGQPGAYPPQQSGQP--GAY---PPQQGV 194



Score = 35.4 bits (80), Expect = 0.27
Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 7/101 (6%)
Frame = +1

Query: 85 VPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPY- 261
+P V G P G P +Q PG P G P Y P PG + PPY
Sbjct: 20 MPVKVMGTP------GAPGSQSTPGAP-------GAPGQYPPQ----QPGAPGSNLPPYP 62

Query: 262 ----LGSPYMPAPYPDGNGWQ--PHSPLPPQYWPGNQSSDP 366
G+P P YP Q P P P +P Q P
Sbjct: 63 GTQQPGAPGAPGQYPPQQPGQYPPQQPGAPGQYPPQQPGQP 103



Score = 32.7 bits (73), Expect = 1.7
Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 15/86 (17%)
Frame = +1

Query: 154 PGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSP------YMPAPYPDGN---- 303
PGVPP +PG P + G P +YPP G P P YP
Sbjct: 207 PGVPPPQGAYPGQPGVPPQQGAYPGQQPPMGAYPPQ-GQPGAYPPQGQPGAYPPQQQQVA 265

Query: 304 --GWQ-PHSPLPPQY--WPGNQSSDP 366
G Q P PPQ +PG Q + P
Sbjct: 266 YPGQQPPMGAYPPQQGAYPGQQGAYP 291


>sp|Q02926|RB97D_DROME Ribonucleoprotein RB97D OS=Drosophila
melanogaster GN=Rb97D PE=1 SV=1
Length = 471

Score = 40.8 bits (94), Expect = 0.006
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Frame = +1

Query: 148 FMPGVPPYAAMHPGMP-------NHYDPSFGFTGSVRPGLSYPPYLGSP-------YMPA 285
F P VPP AM P + P+F + G P + PPY P + P
Sbjct: 244 FRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPAM--PPYYQQPPPQQMNGWGPY 301

Query: 286 PYPDGNGWQPHSPLPP--QYWPGNQSSDP 366
P P NGW P PP Q W NQ P
Sbjct: 302 PPPQQNGWNAPPPPPPGAQQWHANQWGCP 330


>sp|Q27409|FP1_MYTGA Adhesive plaque matrix protein OS=Mytilus
galloprovincialis GN=FP1 PE=2 SV=1
Length = 751

Score = 40.8 bits (94), Expect = 0.006
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 1/87 (1%)
Frame = +1

Query: 136 PHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPP-YLGSPYMPAPYPDGNGWQ 312
P + P PP P P Y P + S +P +SYPP Y P P Y +
Sbjct: 327 PTYKAKPSYPPTYKAKPSYPPSYKPKTTYPPSYKPKISYPPTYKAKPSYPPIYKAKPSYP 386

Query: 313 PHSPLPPQYWPGNQSSDPIDGVYHRSP 393
P P Y P ++ Y P
Sbjct: 387 PTYKAKPSYLPTYKAKPSYPPTYKAKP 413



Score = 35.0 bits (79), Expect = 0.35
Identities = 33/121 (27%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Frame = +1

Query: 73 AGDSVPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHY--DPSFGFTGSVRPGL 246
A S P K P P + P PP P P Y PS+ T +P
Sbjct: 451 AKPSYPPTYKAKPSYP-----PTYKAKPSYPPTYKTKPSYPRTYKAKPSYSSTYKAKP-- 503

Query: 247 SYPP-YLGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDGVYHRSP-HQQSISTPS 420
SYPP Y P P Y + P P Y P ++ Y P + Q+ S
Sbjct: 504 SYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPQTYKAKS 563

Query: 421 S 423
S
Sbjct: 564 S 564



Score = 33.5 bits (75), Expect = 1.0
Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 11/88 (12%)
Frame = +1

Query: 163 PPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPP-----------YLGSPYMPAPYPDGNGW 309
PP P+ Y P + + +P +SYPP Y P P+ Y +
Sbjct: 236 PPIYKTKASYPSSYKPKKTYPSTYKPKISYPPTYKAKPSYPTSYRAKPSYPSTYKAKPSY 295

Query: 310 QPHSPLPPQYWPGNQSSDPIDGVYHRSP 393
P P Y P ++ Y P
Sbjct: 296 PPTYKAKPSYPPTYKAKPTYPSTYKAKP 323



Score = 33.1 bits (74), Expect = 1.3
Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
Frame = +1

Query: 73 AGDSVPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHY--DPSFGFTGSVRPGL 246
A S P+ K P P + P PP P P+ Y PS+ T +P
Sbjct: 281 AKPSYPSTYKAKPSYP-----PTYKAKPSYPPTYKAKPTYPSTYKAKPSYPPTYKAKP-- 333

Query: 247 SYPP-YLGSPYMPAPYPDGNGWQPHSPLPPQYWP 345
SYPP Y P P Y +P + PP Y P
Sbjct: 334 SYPPTYKAKPSYPPSY------KPKTTYPPSYKP 361



Score = 33.1 bits (74), Expect = 1.3
Identities = 26/108 (24%), Positives = 33/108 (30%), Gaps = 1/108 (0%)
Frame = +1

Query: 73 AGDSVPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSY 252
A S P K P P + P PP P P Y + + + SY
Sbjct: 521 AKPSYPPTYKAKPSYP-----PTYKAKPSYPPTYKAKPSYPQTYKAKSSYPPTYKAKPSY 575

Query: 253 PP-YLGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDGVYHRSP 393
PP Y P P Y + P P Y P ++ Y P
Sbjct: 576 PPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKP 623



Score = 32.3 bits (72), Expect = 2.2
Identities = 32/122 (26%), Positives = 38/122 (31%), Gaps = 11/122 (9%)
Frame = +1

Query: 73 AGDSVPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHY--DPSFGFTGSVRPG- 243
A S P K P P + P PP P P Y PS+ T +P
Sbjct: 381 AKPSYPPTYKAKPSYL-----PTYKAKPSYPPTYKAKPRYPTTYKAKPSYPPTYKAKPSY 435

Query: 244 -------LSYPP-YLGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDGVYHRSPHQ 399
LSYPP Y P P Y + P P Y P ++ Y P
Sbjct: 436 PPTYKAKLSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKTKPSYPRTYKAKPSY 495

Query: 400 QS 405
S
Sbjct: 496 SS 497



Score = 32.0 bits (71), Expect = 2.9
Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Frame = +1

Query: 136 PHNQFMPGVPPYAAMHPGMPNHYD--PSFGFTGSVRPGLSYPP-YLGSPYMPAPYPDGNG 306
P + P PP P P Y PS+ T +P SYPP Y P P Y
Sbjct: 567 PTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKP--SYPPTYKAKPSYPPTYKAKPS 624

Query: 307 WQPHSPLPPQYWPGNQSSDPIDGVYHRSP 393
+ P P Y P ++ Y P
Sbjct: 625 YPPTYKAKPSYPPTYKAKPSYPPTYKAKP 653



Score = 31.6 bits (70), Expect = 3.8
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1

Query: 154 PGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPP-YLGSPYMPAPYPDGNGWQPHSPLP 330
P PP P+ Y P + + +P L+YPP Y P P Y S P
Sbjct: 687 PSYPPTYKSKSSYPSSYKPKKTYPPTYKPKLTYPPIYKPKPSYPPTY--------KSSYP 738

Query: 331 PQY 339
P+Y
Sbjct: 739 PRY 741



Score = 30.8 bits (68), Expect = 6.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +1

Query: 193 PNHYDPSFGFTGSVRPGLSYPP-YLGSPYMPAPYPD----GNGWQPHSPLPPQYWP 345
P Y P + + +P SYPP Y P PA Y + ++P PP Y P
Sbjct: 106 PPVYKPKMTYPPTYKPKPSYPPTYKPKPSYPATYKSKSSYPSSYKPKKTYPPTYKP 161



Score = 30.4 bits (67), Expect = 8.5
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +1

Query: 154 PGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMP-APYPDGNGWQPHSPLP 330
P PP P P Y + S +P +YPP Y P YP ++P P
Sbjct: 123 PSYPPTYKPKPSYPATYKSKSSYPSSYKPKKTYPP----TYKPKLTYPP--TYKPKPSYP 176

Query: 331 PQYWP 345
P Y P
Sbjct: 177 PTYKP 181



Score = 30.4 bits (67), Expect = 8.5
Identities = 36/139 (25%), Positives = 48/139 (34%), Gaps = 11/139 (7%)
Frame = +1

Query: 73 AGDSVPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHY------DPSFGFTGSV 234
A S P K P P + P PP P P Y PS+ T
Sbjct: 621 AKPSYPPTYKAKPSYP-----PTYKAKPSYPPTYKAKPSYPATYPSTYKAKPSYPPTYKA 675

Query: 235 RPGLSYPP-YLGSPYMPAPYPD----GNGWQPHSPLPPQYWPGNQSSDPIDGVYHRSPHQ 399
+P SYPP Y P P Y + ++P PP Y P + PI P
Sbjct: 676 KP--SYPPTYKPKPSYPPTYKSKSSYPSSYKPKKTYPPTYKP-KLTYPPIYKPKPSYPPT 732

Query: 400 QSISTPSSREKEVHESNRY 456
S P +K++ ++Y
Sbjct: 733 YKSSYPPRYKKKISYPSQY 751


>sp|Q5AZM3|SEC31_EMENI Protein transport protein sec31 OS=Emericella
nidulans GN=sec31 PE=3 SV=1
Length = 1275

Score = 40.4 bits (93), Expect = 0.008
Identities = 45/165 (27%), Positives = 60/165 (36%), Gaps = 25/165 (15%)
Frame = +1

Query: 34 PEELIRRGSLDEGAGDSVPAVVKGH-PMMAAWQGQPHNQFMPGVPP--------YAAMHP 186
P I RGS A ++P + P AA P Q VPP YA P
Sbjct: 1052 PPASIPRGSSPYNAPPTIPPPSNRYAPSPAAQAASPQLQARAPVPPPPQAAASPYAPPPP 1111

Query: 187 GMP---NHYDPSFGFTGSVRPGLSYPPYLGSPYMPAPYPDGNGWQPH--------SPLPP 333
P N Y PS PP + P P P G +P SP PP
Sbjct: 1112 AQPLAANPYAPST------------PPPMQPPLQQVPPPQSAGSRPSTASSVKKASPAPP 1159

Query: 334 QYWPGNQS-----SDPIDGVYHRSPHQQSISTPSSREKEVHESNR 453
+Y PG++S + PI + + PSS + +V ++ R
Sbjct: 1160 KYPPGDRSHIPAEARPIFEILSEDMQRVKSRAPSSFKAQVDDAER 1204


>sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1
OS=Caenorhabditis briggsae GN=ama-1 PE=3 SV=2
Length = 1853

Score = 40.4 bits (93), Expect = 0.008
Identities = 28/97 (28%), Positives = 36/97 (37%)
Frame = +1

Query: 130 GQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMPAPYPDGNGW 309
G P P P Y M PG+ + P F T P Y SP P+ P
Sbjct: 1557 GDPLGALSPRTPAYGGMSPGVYSPASPGFSMTS--------PHY--SPTSPSYSPTSPAH 1606

Query: 310 QPHSPLPPQYWPGNQSSDPIDGVYHRSPHQQSISTPS 420
SP+ P Y P + S P Y + S ++PS
Sbjct: 1607 HGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1643



Score = 32.0 bits (71), Expect = 2.9
Identities = 22/90 (24%), Positives = 34/90 (37%)
Frame = +1

Query: 148 FMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMPAPYPDGNGWQPHSPL 327
+ P P Y+ P Y P+ P S SP P P ++ +SP
Sbjct: 1665 YSPTSPSYSPSSP----RYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPS 1720

Query: 328 PPQYWPGNQSSDPIDGVYHRSPHQQSISTP 417
P+Y P + + P Y + Q S ++P
Sbjct: 1721 SPKYSPSSPTYSPTSPSYSPTSPQYSPTSP 1750


>sp|P97496|SMRC1_MOUSE SWI/SNF complex subunit SMARCC1 OS=Mus musculus
GN=Smarcc1 PE=1 SV=2
Length = 1104

Score = 40.0 bits (92), Expect = 0.011
Identities = 38/125 (30%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
Frame = +1

Query: 70 GAGDSVPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFG---FTGSVRP 240
G P GHP M PH Q PPY MH MP + P G GS+ P
Sbjct: 975 GGPGMAPLGATGHPGM-----MPHQQ----PPPYPLMHHQMPPPHPPQPGQIPGPGSMMP 1025

Query: 241 GLSYPPYLGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPI-----DGVYHRSPHQQS 405
G P + +P G+G P +PP PGN + +G+Y P QQ
Sbjct: 1026 GQPMPGRMIPAVAANIHPTGSGPTPPG-MPPM--PGNILGPRVPLTAPNGMYPPPPQQQQ 1082

Query: 406 ISTPS 420
P+
Sbjct: 1083 PPPPA 1087


>sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sapiens
GN=SMARCC1 PE=1 SV=3
Length = 1105

Score = 39.7 bits (91), Expect = 0.014
Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 8/147 (5%)
Frame = +1

Query: 1 LAASEENTEKRPEELIRRGSLDEGAGDSVPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAM 180
L A ++ +++ + ++ G P GHP M PH Q PPY M
Sbjct: 952 LRARQQMEQQQHGQNPQQAHQHSGGPGLAPLGAAGHPGM-----MPHQQ----PPPYPLM 1002

Query: 181 HPGMPNHYDPSFG---FTGSVRPGLSYPPYLGSPYMPAPYPDGNGWQPHSPLPPQYWPGN 351
H MP + P G GS+ PG P + +P G+G P +PP PGN
Sbjct: 1003 HHQMPPPHPPQPGQIPGPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPPG-MPPM--PGN 1059

Query: 352 QSSDPI-----DGVYHRSPHQQSISTP 417
+ +G+Y P QQ P
Sbjct: 1060 ILGPRVPLTAPNGMYPPPPQQQPPPPP 1086


>sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1
OS=Caenorhabditis elegans GN=ama-1 PE=1 SV=2
Length = 1852

Score = 39.7 bits (91), Expect = 0.014
Identities = 31/107 (28%), Positives = 39/107 (36%), Gaps = 10/107 (9%)
Frame = +1

Query: 130 GQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFT----GSVRPGLS--YPPYLGSPYMPAPY 291
G P P P Y M PG+ + P F T P S P SP P+
Sbjct: 1554 GDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYS 1613

Query: 292 PDGNGWQP----HSPLPPQYWPGNQSSDPIDGVYHRSPHQQSISTPS 420
P + P +SP P Y P + S P Y + S S+PS
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPS 1660



Score = 32.7 bits (73), Expect = 1.7
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Frame = +1

Query: 148 FMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMPAPYPDGNGWQP---- 315
+ P P Y+ P Y P+ P S SP P+ Y G G+ P
Sbjct: 1668 YSPSSPRYSPTSPT----YSPTSPTYSPTSPTYSPTSPTYSPTSPS-YESGGGYSPSSPK 1722

Query: 316 HSPLPPQYWPGNQSSDPIDGVYHRSPHQQSISTPS 420
+SP P Y P + S P Y + Q S S+P+
Sbjct: 1723 YSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPT 1757



Score = 31.2 bits (69), Expect = 5.0
Identities = 24/86 (27%), Positives = 32/86 (37%)
Frame = +1

Query: 145 QFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMPAPYPDGNGWQPHSP 324
Q+ P P Y+ P P + S + + G S P Y SP P +SP
Sbjct: 1743 QYSPTSPQYS---PSSPTYTPSSPTYNPTSPRGFSSPQY--SPTSPT----------YSP 1787

Query: 325 LPPQYWPGNQSSDPIDGVYHRSPHQQ 402
P Y P + P Y SP +Q
Sbjct: 1788 TSPSYTPSSPQYSPTSPTYTPSPSEQ 1813


>sp|P24639|ANXA7_DICDI Annexin A7 OS=Dictyostelium discoideum
GN=nxnA PE=1 SV=1
Length = 462

Score = 39.7 bits (91), Expect = 0.014
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Frame = +1

Query: 100 KGHPMMAAW---QGQPHNQFMP---GVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPY 261
+G+P + QG P Q P G PP P Y P G+ P YPP
Sbjct: 44 QGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPP--QQGYPPQQGYP----PQQGYPPQ 97

Query: 262 LGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPI 369
G P YP G+ P PPQ +P Q P+
Sbjct: 98 QGYPPQQG-YPPQQGYPPQQGYPPQGYPPQQGYPPV 132



Score = 34.7 bits (78), Expect = 0.45
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Frame = +1

Query: 100 KGHPMMAAW---QGQPHNQFMP---GVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPY 261
+G+P + QG P Q P G PP P Y P G+ P YPP
Sbjct: 32 QGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPP--QQGYPPQQGYP----PQQGYPPQ 85

Query: 262 LGSPYMPAPYPDGNGWQPHSPLPPQY-WPGNQSSDP 366
G P YP G+ P PPQ +P Q P
Sbjct: 86 QGYPPQQG-YPPQQGYPPQQGYPPQQGYPPQQGYPP 120



Score = 34.3 bits (77), Expect = 0.59
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 6/98 (6%)
Frame = +1

Query: 100 KGHPMMAAW---QGQPHNQFMP---GVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPY 261
+G+P + QG P Q P G PP P Y P G+ P YPP
Sbjct: 38 QGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPP--QQGYPPQQGYP----PQQGYPPQ 91

Query: 262 LGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDG 375
G P YP G+ P PPQ Q P G
Sbjct: 92 QGYPPQQG-YPPQQGYPPQQGYPPQQGYPPQGYPPQQG 128


tr_hit_id Q10BG2
Definition tr|Q10BG2|Q10BG2_ORYSJ Os03g0819300 protein OS=Oryza sativa subsp. japonica
Align length 108
Score (bit) 48.9
E-value 0.0003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951436|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_G12, 5'
(654 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q10BG2|Q10BG2_ORYSJ Os03g0819300 protein OS=Oryza sativa subs... 49 3e-04
tr|B3NXL7|B3NXL7_DROER GG17708 OS=Drosophila erecta GN=GG17708 P... 49 4e-04
tr|Q84TC1|Q84TC1_ORYSJ Putative uncharacterized protein OJ1754_E... 48 5e-04
tr|B8AMB4|B8AMB4_ORYSI Putative uncharacterized protein OS=Oryza... 48 5e-04
tr|A2XNE8|A2XNE8_ORYSI Putative uncharacterized protein OS=Oryza... 47 8e-04
tr|A9U0L9|A9U0L9_PHYPA Predicted protein OS=Physcomitrella paten... 47 0.001
tr|Q0D025|Q0D025_ASPTN Putative uncharacterized protein OS=Asper... 47 0.001
tr|Q4N3M7|Q4N3M7_THEPA Putative uncharacterized protein OS=Theil... 46 0.002
tr|Q7S9H3|Q7S9H3_NEUCR Putative uncharacterized protein OS=Neuro... 46 0.002
tr|A2DYB6|A2DYB6_TRIVA Calcium-binding protein, putative OS=Tric... 45 0.003
tr|A6QVV9|A6QVV9_AJECN Predicted protein OS=Ajellomyces capsulat... 45 0.004
tr|A2E5J2|A2E5J2_TRIVA Putative uncharacterized protein OS=Trich... 45 0.005
tr|Q9U3S8|Q9U3S8_CAEEL Protein B0035.1b, confirmed by transcript... 44 0.007
tr|Q93156|Q93156_CAEEL Protein B0035.1a, confirmed by transcript... 44 0.007
tr|B5E167|B5E167_DROPS GA24339 OS=Drosophila pseudoobscura pseud... 44 0.007
tr|A4IBT6|A4IBT6_LEIIN Putative uncharacterized protein OS=Leish... 44 0.007
tr|A0BKH8|A0BKH8_PARTE Chromosome undetermined scaffold_112, who... 44 0.007
tr|Q2HHF9|Q2HHF9_CHAGB Predicted protein OS=Chaetomium globosum ... 44 0.007
tr|Q7SGF5|Q7SGF5_NEUCR Predicted protein (Putative uncharacteriz... 44 0.009
tr|Q90713|Q90713_CHICK Galectin-3 OS=Gallus gallus PE=2 SV=1 44 0.011
tr|Q8QGD9|Q8QGD9_CHICK Galectin-3TM1 isoform containing transmem... 44 0.011
tr|A4GTP0|A4GTP0_CHICK Galectin-3 OS=Gallus gallus PE=2 SV=1 44 0.011
tr|Q9U7P0|Q9U7P0_9CILI Putative uncharacterized protein (Fragmen... 44 0.011
tr|B4KVZ9|B4KVZ9_DROMO GI13845 OS=Drosophila mojavensis GN=GI138... 44 0.011
tr|A2ECQ1|A2ECQ1_TRIVA Putative uncharacterized protein OS=Trich... 44 0.011
tr|Q0CY55|Q0CY55_ASPTN Putative uncharacterized protein OS=Asper... 44 0.011
tr|A6RTZ2|A6RTZ2_BOTFB Putative uncharacterized protein OS=Botry... 44 0.011
tr|Q8T925|Q8T925_TETTH Igr2p OS=Tetrahymena thermophila GN=IGR2 ... 43 0.015
tr|Q4N0V6|Q4N0V6_THEPA Putative uncharacterized protein OS=Theil... 43 0.015
tr|Q23BZ5|Q23BZ5_TETTH XYPPX repeat family protein OS=Tetrahymen... 43 0.015

>tr|Q10BG2|Q10BG2_ORYSJ Os03g0819300 protein OS=Oryza sativa subsp.
japonica GN=Os03g0819300 PE=2 SV=1
Length = 180

Score = 48.9 bits (115), Expect = 3e-04
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1

Query: 64 DEGAGDSVPAVVKG-HPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRP 240
D+G + P+ G +P+M + P PG P A P Y P+ G+ G+ P
Sbjct: 14 DKGFHGAYPSGYPGAYPLMQGYPNSPGQYPTPGGYPSAP-----PGQYPPAGGYPGAQYP 68

Query: 241 GLSYPPYLGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDGVYH 384
YPP G Y P YP +G+ PP +PG+ P+ G H
Sbjct: 69 PSGYPPSQGG-YPPGAYPP-SGYPQQPGYPPAGYPGHGHGPPMQGGGH 114


>tr|B3NXL7|B3NXL7_DROER GG17708 OS=Drosophila erecta GN=GG17708 PE=4
SV=1
Length = 686

Score = 48.5 bits (114), Expect = 4e-04
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Frame = +1

Query: 73 AGDSVPA--VVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGF-TGSVRPG 243
AG +P+ V+ G W +P+ +P P + + PG P G GSV P
Sbjct: 404 AGSVIPSIPVLPGGAGSWPWHPRPNIPILP--PTWRPLLPGQNGSGAPGSGLINGSVNP- 460

Query: 244 LSYPPYLGSPYMPAPYPDGNGWQPHSPLPPQ----YWPGNQSSDPIDGVYHRSPHQQSIS 411
P P+ P N W+P P+P Q PGN +S+ + V +P +
Sbjct: 461 ----PQRPHPFWPNWQNWVNSWRPTKPVPVQPQNPQQPGNSNSENAESVEQAAPVPPAEG 516

Query: 412 TPSSREKEVHESNRYDADNMQD---DGEDYSND 501
S+ + +SN+ ++ +D GED S +
Sbjct: 517 PASNENASIEDSNKASSEKSKDKPKSGEDQSKE 549


>tr|Q84TC1|Q84TC1_ORYSJ Putative uncharacterized protein
OJ1754_E06.10 (Putative uncharacterized protein)
OS=Oryza sativa subsp. japonica GN=OJ1754_E06.10 PE=4
SV=1
Length = 185

Score = 48.1 bits (113), Expect = 5e-04
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +1

Query: 64 DEGAGDSVPAVVKG-HPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRP 240
D+G + P+ G +P+M + P PG P A P Y P+ G+ G+ P
Sbjct: 14 DKGFHGAYPSGYPGAYPLMQGYPNSPGQYPTPGGYPSAP-----PGQYPPAGGYPGAQYP 68

Query: 241 GLSYPPYLGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDG 375
YPP G Y P YP +G+ PP +PG+ P+ G
Sbjct: 69 PSGYPPSQGG-YPPGAYPP-SGYPQQPGYPPAGYPGHGHGPPMQG 111


>tr|B8AMB4|B8AMB4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14099 PE=4 SV=1
Length = 180

Score = 48.1 bits (113), Expect = 5e-04
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1

Query: 64 DEGAGDSVPAVVKG-HPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRP 240
D+G + P+ G +P+M + P PG P A P Y P+ G+ G+ P
Sbjct: 14 DKGFHGAYPSGYPGAYPLMQGYPNSPGQYPTPGGYPSAP-----PGQYPPAGGYPGAQYP 68

Query: 241 GLSYPPYLGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDGVYH 384
YPP G Y P YP +G+ PP +PG+ P+ G H
Sbjct: 69 PGGYPPSQGG-YPPGAYPP-SGYPQQPGYPPAGYPGHGHGPPMQGGGH 114


>tr|A2XNE8|A2XNE8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14087 PE=4 SV=1
Length = 185

Score = 47.4 bits (111), Expect = 8e-04
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +1

Query: 64 DEGAGDSVPAVVKG-HPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRP 240
D+G + P+ G +P+M + P PG P A P Y P+ G+ G+ P
Sbjct: 14 DKGFHGAYPSGYPGAYPLMQGYPNSPGQYPTPGGYPSAP-----PGQYPPADGYPGAQYP 68

Query: 241 GLSYPPYLGSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDG 375
YPP G Y P YP +G+ PP +PG+ P+ G
Sbjct: 69 PGGYPPSQGG-YPPGAYPP-SGYPQQPGYPPAGYPGHGHGPPMQG 111


>tr|A9U0L9|A9U0L9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_61593 PE=4 SV=1
Length = 856

Score = 47.0 bits (110), Expect = 0.001
Identities = 35/126 (27%), Positives = 45/126 (35%), Gaps = 16/126 (12%)
Frame = +1

Query: 64 DEGAGDSVPAVVKGHPMMAAWQGQPHNQFMPG----VPPYAAMHPGMPNHYDPSFGFTGS 231
D + P+V P A GQ + + P P YA P P +Y G
Sbjct: 726 DNRPARTYPSVGASAPAPPASHGQDSSYYHPAPTGSAPGYAGQLPARPPYY------AGQ 779

Query: 232 VRPGLSYPPYLGSP------------YMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDG 375
+PG+ PPY P Y PYP G + P PQ PG+Q +
Sbjct: 780 NQPGMPPPPYYSQPPAPPQPPHQAHIYSQPPYPGWQGQYYNGPPAPQAPPGSQPAASSQP 839

Query: 376 VYHRSP 393
YH P
Sbjct: 840 PYHAPP 845


>tr|Q0D025|Q0D025_ASPTN Putative uncharacterized protein
OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_00709
PE=4 SV=1
Length = 548

Score = 47.0 bits (110), Expect = 0.001
Identities = 37/110 (33%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Frame = +1

Query: 70 GAGDSVPAVVKGHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLS 249
GA S +G+P Q P Q P PPY PG P +G G
Sbjct: 62 GARPSPSPAPQGYPPSPYSQAPPPPQGYPQAPPYGQPPPGPPP--SQQYGAPG------Q 113

Query: 250 YPPYLGSPYMP--APYPDGNGWQPHSPLPPQYW--PGNQSSDPIDGVYHR 387
YPP S Y P APYP G G QP +P P P +++D G Y +
Sbjct: 114 YPPQPPSHYPPQQAPYPGGPGQQPGAPYGPPGGAPPSARATDQQIGAYRQ 163


>tr|Q4N3M7|Q4N3M7_THEPA Putative uncharacterized protein
OS=Theileria parva GN=TP04_0002 PE=4 SV=1
Length = 472

Score = 46.2 bits (108), Expect = 0.002
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +1

Query: 103 GHPMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMP 282
G P+ + +P ++ PG PPY P Y P YPPY PY P
Sbjct: 120 GFPVQPGYPVRPIPRYPPGYPPYP------PYPYPP-------------YPPYPYPPYPP 160

Query: 283 -APYPDGNGWQPHSPLPPQYWPGNQSSDPIDGVYHRSPHQQSISTPSSREKEVHE 444
PYP + + P+ P P Y P Q P ++ P QQSI P + + + +
Sbjct: 161 YGPYPPYSPYDPYPPYSP-YVPPTQPIPP-RPTHYVPPPQQSIEQPIEQPQPIDQ 213


>tr|Q7S9H3|Q7S9H3_NEUCR Putative uncharacterized protein
OS=Neurospora crassa GN=NCU06565 PE=4 SV=1
Length = 825

Score = 45.8 bits (107), Expect = 0.002
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Frame = +1

Query: 109 PMMAAWQGQPHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMPAP 288
P A+ QP++Q PG PP P +P Y S+ G P Y SP P
Sbjct: 184 PPPGAYPPQPYSQ--PG-PPLPVPPPPVPPPYPSSYS-------GPPQPEYHYSPGQQPP 233

Query: 289 YPDGNGW------QPHSPLPPQYWPGNQSSDPIDGVYHRSPHQQSISTPSSREKEVHESN 450
YP GW PH P PP P N ++ HR Q S+ +++ H+ +
Sbjct: 234 YPPPTGWVPPPFAPPHLPPPP---PSNSGANK-----HRGKRQNQGPKHSNAQRDRHDRH 285

Query: 451 RYDADNMQDDGED 489
D N + D D
Sbjct: 286 NRDEGNDRVDRFD 298



Score = 38.5 bits (88), Expect = 0.37
Identities = 37/106 (34%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Frame = +1

Query: 106 HPMMAAWQGQ-------PHNQFMPGVPPYAAMHPGMPNHYDPSFGFTGSVRPGLSYPPYL 264
HP A GQ P +Q+ P PPY P P Y PS + V P PP
Sbjct: 135 HPPPPAVYGQFPPAAPPPPSQYAPQ-PPYG--QPQYPPPYPPSNYYPNGVPP----PPPG 187

Query: 265 GSPYMPAPYPDGNGWQPHSPLPPQYWPGNQSSDPIDGVYHRSPHQQ 402
P P P P P+PP Y P + S P YH SP QQ
Sbjct: 188 AYPPQPYSQPGPPLPVPPPPVPPPY-PSSYSGPP-QPEYHYSPGQQ 231


>tr|A2DYB6|A2DYB6_TRIVA Calcium-binding protein, putative
OS=Trichomonas vaginalis G3 GN=TVAG_393200 PE=4 SV=1
Length = 146

Score = 45.4 bits (106), Expect = 0.003
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 1/117 (0%)
Frame = +1

Query: 109 PMMAAWQGQPHNQFMPGVPPYAAMHP-GMPNHYDPSFGFTGSVRPGLSYPPYLGSPYMPA 285
P A+ QP PG+PP M+P G P Y P PG+ YPP Y P
Sbjct: 28 PPPGAYPPQPGYAPAPGMPPPPGMYPPGAPGAYPPGAYPAPPAGPGM-YPPPPPGAYPPG 86

Query: 286 PYPDGNGWQPHSPLPPQYWPGNQSSDPIDGVYHRSPHQQSISTPSSREKEVHESNRY 456
YP P PP +PG + G ++R H ++ +S + +Y
Sbjct: 87 AYP---------PPPPGAYPGAYARPGYPGGFYRKGHYKANGKWTSSSSSSSDYKKY 134